메뉴 건너뛰기




Volumn 62, Issue 2, 2006, Pages 515-525

A Bayesian mixture model for partitioning gene expression data

Author keywords

Bayesian hierarchical models; Birth death MCMC; Clustering; Microarrays; Mixture models

Indexed keywords

DATA HANDLING; HIERARCHICAL SYSTEMS; MARKOV PROCESSES; MICROARRAYS;

EID: 33745283400     PISSN: 0006341X     EISSN: 15410420     Source Type: Journal    
DOI: 10.1111/j.1541-0420.2005.00492.x     Document Type: Article
Times cited : (17)

References (25)
  • 5
    • 33745265387 scopus 로고    scopus 로고
    • Gene expression clustering with functional mixture models
    • and. In. S. Thrun. L. K. Saul, and. B. Schölkopf (. eds. Boston: MIT Press.
    • Chudova D. Hart C. Mjolsness E., and Smyth P. ( 2004). Gene expression clustering with functional mixture models. In Advances in Neural Information Processing Systems 16, S. Thrun L. K. Saul, and B. Schölkopf ( eds 683 693. Boston : MIT Press.
    • (2004) Advances in Neural Information Processing Systems 16 , pp. 683-693
    • Chudova, D.1    Hart, C.2    Mjolsness, E.3    Smyth, P.4
  • 6
    • 0032269108 scopus 로고    scopus 로고
    • How many clusters¿ Which clustering method¿ Answers via model-based cluster analysis
    • and
    • Fraley C. and Raftery A. E. ( 1998). How many clusters¿ Which clustering method¿ Answers via model-based cluster analysis. Computer Journal 41, 578 588.
    • (1998) Computer Journal , vol.41 , pp. 578-588
    • Fraley, C.1    Raftery, A.E.2
  • 7
    • 85153256135 scopus 로고    scopus 로고
    • and. In Proceedings of the Ninth International Workshop on Artificial Intelligence and Statistics. Available at
    • Gaffney S. and Smyth P. ( 2003). Curve clustering with random effects regression mixture. In Proceedings of the Ninth International Workshop on Artificial Intelligence and Statistics. Available at http://research.microsoft. com/conferences/aistats2003.
    • (2003) Curve Clustering with Random Effects Regression Mixture
    • Gaffney, S.1    Smyth, P.2
  • 8
    • 0001582213 scopus 로고    scopus 로고
    • Inference and monitoring convergence
    • In. W. Gilks. S. Richardson, and. D. Spiegelhalter (. eds. New York: Chapman & Hall/CRC.
    • Gelman A. ( 1996). Inference and monitoring convergence. In Markov Chain Monte Carlo in Practice, W. Gilks S. Richardson, and D. Spiegelhalter ( eds 131 143. New York: Chapman & Hall/CRC.
    • (1996) Markov Chain Monte Carlo in Practice , pp. 131-143
    • Gelman, A.1
  • 10
    • 0034147039 scopus 로고    scopus 로고
    • Bayesian inference for finite mixtures of generalized linear models with random effects
    • and
    • Lenk P. J. and DeSarbo W. S. ( 2000). Bayesian inference for finite mixtures of generalized linear models with random effects. Psychometrika 65, 93 119.
    • (2000) Psychometrika , vol.65 , pp. 93-119
    • Lenk, P.J.1    Desarbo, W.S.2
  • 11
    • 0037339264 scopus 로고    scopus 로고
    • Clustering of time-course gene expression data using a mixed-effects model with B-spline
    • and
    • Luan Y. and Li H. ( 2003). Clustering of time-course gene expression data using a mixed-effects model with B-spline. Bioinformatics 19, 474 482.
    • (2003) Bioinformatics , vol.19 , pp. 474-482
    • Luan, Y.1    Li, H.2
  • 12
    • 9144229663 scopus 로고    scopus 로고
    • Whole-genome microarrays of fission yeast: Characteristics, accuracy, reproducibility, and processing of array data
    • and
    • Lyne R. Burns G. Mata J. Penkett C. J. Rustici G. Chen D. Langford C. Vetrie D., and Bähler J. ( 2003). Whole-genome microarrays of fission yeast: Characteristics, accuracy, reproducibility, and processing of array data. BMC Genomics 4, 27 42.
    • (2003) BMC Genomics , vol.4 , pp. 27-42
    • Lyne, R.1    Burns, G.2    Mata, J.3    Penkett, C.J.4    Rustici, G.5    Chen, D.6    Langford, C.7    Vetrie, D.8    Bähler, J.9
  • 13
    • 0036729529 scopus 로고    scopus 로고
    • The transcriptional program of meiosis and sporulation in fission yeast
    • and
    • Mata J. Lyne R. Burns G., and Bähler J. ( 2002). The transcriptional program of meiosis and sporulation in fission yeast. Nature Genetics 32, 143 147.
    • (2002) Nature Genetics , vol.32 , pp. 143-147
    • Mata, J.1    Lyne, R.2    Burns, G.3    Bähler, J.4
  • 16
    • 0036739286 scopus 로고    scopus 로고
    • Bayesian infinite mixture model based clustering of gene expression profiles
    • and
    • Medvedovic M. and Sivaganesan S. ( 2002). Bayesian infinite mixture model based clustering of gene expression profiles. Bioinformatics 18, 1194 1206.
    • (2002) Bioinformatics , vol.18 , pp. 1194-1206
    • Medvedovic, M.1    Sivaganesan, S.2
  • 22
    • 0034374610 scopus 로고    scopus 로고
    • Bayesian analysis of mixture models with an unknown number of components - An alternative to reversible jump methods
    • Stephens M. ( 2000a). Bayesian analysis of mixture models with an unknown number of components - An alternative to reversible jump methods. Annals of Statistics 28, 40 74.
    • (2000) Annals of Statistics , vol.28 , pp. 40-74
    • Stephens, M.1
  • 24
    • 85153283254 scopus 로고    scopus 로고
    • and. In Bayesian Statistics 7, Proceedings of the Seventh Valencia International Meeting, J. Bernardo. M. Bayarri. J. Berger. A. Dawid. D. Heckerman. A. Smith, and. M. West (. eds. Oxford: Clarendon Press.
    • Wakefield J. Zhou C., and Self S. ( 2003). Modelling gene expression over time: Curve clustering with informative prior distributions. In Bayesian Statistics 7, Proceedings of the Seventh Valencia International Meeting, J. Bernardo M. Bayarri J. Berger A. Dawid D. Heckerman A. Smith, and M. West ( eds 721 732. Oxford: Clarendon Press.
    • (2003) Modelling Gene Expression over Time: Curve Clustering with Informative Prior Distributions , pp. 721-732
    • Wakefield, J.1    Zhou, C.2    Self, S.3
  • 25
    • 0034782618 scopus 로고    scopus 로고
    • Model-based clustering and data transformations for gene expression data
    • and
    • Yeung K. Fraley C. Murua A. Raftery A., and Ruzzo W. ( 2001). Model-based clustering and data transformations for gene expression data. Bioinformatics 17, 977 987.
    • (2001) Bioinformatics , vol.17 , pp. 977-987
    • Yeung, K.1    Fraley, C.2    Murua, A.3    Raftery, A.4    Ruzzo, W.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.