-
1
-
-
17844384785
-
Structural and catalytic diversity within the amidohydrolase superfamily
-
Siebert, C. M., and Raushel, F. M. (2005) Structural and catalytic diversity within the amidohydrolase superfamily, Biochemistry 44, 6383-6391.
-
(2005)
Biochemistry
, vol.44
, pp. 6383-6391
-
-
Siebert, C.M.1
Raushel, F.M.2
-
2
-
-
0031000649
-
An evolutionary treasure: Unification of a broad set of amidohydrolases related to urease
-
Holm, L., and Sander, C. (1997) An evolutionary treasure: unification of a broad set of amidohydrolases related to urease, Proteins 28, 72-82.
-
(1997)
Proteins
, vol.28
, pp. 72-82
-
-
Holm, L.1
Sander, C.2
-
3
-
-
2442496666
-
Mechanism for the hydrolysis of organophosphates by the bacterial phosphotriesterase
-
Aubert, S. A., Li, Y., and Raushel, F. M. (2004) Mechanism for the hydrolysis of organophosphates by the bacterial phosphotriesterase, Biochemistry 43, 5707-5715.
-
(2004)
Biochemistry
, vol.43
, pp. 5707-5715
-
-
Aubert, S.A.1
Li, Y.2
Raushel, F.M.3
-
4
-
-
0033081891
-
A new proposal for urease mechanism based on the crystal structures of the native and inhibited enzyme from Bacillus pasteurii: Why urea hydrolysis costs two nickels
-
Benini, S., Rypniewski, W. R., Wilson, K. S., Miletti, S., Ciurli, S., and Mangani, S. (1999) A new proposal for urease mechanism based on the crystal structures of the native and inhibited enzyme from Bacillus pasteurii: Why urea hydrolysis costs two nickels, Struct. Folding Des. 7, 205-216.
-
(1999)
Struct. Folding Des.
, vol.7
, pp. 205-216
-
-
Benini, S.1
Rypniewski, W.R.2
Wilson, K.S.3
Miletti, S.4
Ciurli, S.5
Mangani, S.6
-
5
-
-
11144301188
-
Mechanism for the dihydroorotase reaction
-
Porter, T. N., Li, Y., and Raushel, F. M. (2004) Mechanism for the dihydroorotase reaction. Biochemistry 43, 16285-16292.
-
(2004)
Biochemistry
, vol.43
, pp. 16285-16292
-
-
Porter, T.N.1
Li, Y.2
Raushel, F.M.3
-
6
-
-
0026434561
-
Atomic structure of adenosine deaminase complexed with a transition state analog: Understanding catalysis and immunodeficiency mutations
-
Wilson, D. K., Rudolph, F. B., and Quiocho, F. A. (1991) Atomic structure of adenosine deaminase complexed with a transition state analog: Understanding catalysis and immunodeficiency mutations, Science 252, 1278-1284.
-
(1991)
Science
, vol.252
, pp. 1278-1284
-
-
Wilson, D.K.1
Rudolph, F.B.2
Quiocho, F.A.3
-
7
-
-
0041319016
-
Crystal structure of uronate isomerase (TM0064) from Thermatoga maritima at 2.85 Å resolution
-
Schwarzenbacher, R., Canaves, J. M., Brinen, L. S., Dai, X., Deacon, A. M., Elsliger, M. A., Eshaghi, S., Floyd, R., Godzik, A., Grittini, C., Grzechnik, S. K., Guda, C., Jaroszewski, L., Karlak, C., Klock, H. E., Koesema, E., Kovarik, J. S., Kreusch, A., Kuhn, P., Lesley, S. A., McMullan, D., McPhillips, T. M., Miller, M. A., Miller, M. D., Morse, A., Moy, K., Ouyang, J., Robb, A., Rodrigues, K., Selby, T. L., Spraggon, G., Stevens, R. C., van den Bedem, H., Velasquez, J., Vincent, J., Wang, X., West, B., Wolf, G., Hodgson, K. O., Wooley, J., and Wilson, I. A. (2003) Crystal structure of uronate isomerase (TM0064) from Thermatoga maritima at 2.85 Å resolution, Proteins 53, 142-145.
-
(2003)
Proteins
, vol.53
, pp. 142-145
-
-
Schwarzenbacher, R.1
Canaves, J.M.2
Brinen, L.S.3
Dai, X.4
Deacon, A.M.5
Elsliger, M.A.6
Eshaghi, S.7
Floyd, R.8
Godzik, A.9
Grittini, C.10
Grzechnik, S.K.11
Guda, C.12
Jaroszewski, L.13
Karlak, C.14
Klock, H.E.15
Koesema, E.16
Kovarik, J.S.17
Kreusch, A.18
Kuhn, P.19
Lesley, S.A.20
McMullan, D.21
McPhillips, T.M.22
Miller, M.A.23
Miller, M.D.24
Morse, A.25
Moy, K.26
Ouyang, J.27
Robb, A.28
Rodrigues, K.29
Selby, T.L.30
Spraggon, G.31
Stevens, R.C.32
Van Den Bedem, H.33
Velasquez, J.34
Vincent, J.35
Wang, X.36
West, B.37
Wolf, G.38
Hodgson, K.O.39
Wooley, J.40
Wilson, I.A.41
more..
-
8
-
-
33644560639
-
Leveraging enzyme structure-function relationships for functional inference and experimental design: The structure-function linkage database
-
Pegg, S. C-H., Brown, S., Ojha, S., Seffernick, J., Meng, E. C., Morris, J. H., Chang, P. J., Huang, C. C., Ferrin, T. E., and Babbitt, P. C. (2006) Leveraging enzyme structure-function relationships for functional inference and experimental design: the structure-function linkage database, Biochemistry 45, 2545-2555.
-
(2006)
Biochemistry
, vol.45
, pp. 2545-2555
-
-
Pegg, S.C.-H.1
Brown, S.2
Ojha, S.3
Seffernick, J.4
Meng, E.C.5
Morris, J.H.6
Chang, P.J.7
Huang, C.C.8
Ferrin, T.E.9
Babbitt, P.C.10
-
9
-
-
0001444830
-
On the mechanism of action of phosphoglucose isomerase and phosphomannose isomerase
-
Topper, Y. J. (1957) On the mechanism of action of phosphoglucose isomerase and phosphomannose isomerase, J. Biol. Chem. 225, 419-426.
-
(1957)
J. Biol. Chem.
, vol.225
, pp. 419-426
-
-
Topper, Y.J.1
-
10
-
-
70449257873
-
The mechanism of the triosphosphate isomerase reaction
-
Rieder, S. V., and Rose, I. A. (1959) The mechanism of the triosphosphate isomerase reaction, J. Biol. Chem. 234, 1007-1010.
-
(1959)
J. Biol. Chem.
, vol.234
, pp. 1007-1010
-
-
Rieder, S.V.1
Rose, I.A.2
-
11
-
-
0032564378
-
Proton transfer in the mechanism of triosephosphate isomerase
-
Harris, T. K., Cole, R. N., Comer, F. I., and Mildvan, A. S. (1998) Proton transfer in the mechanism of triosephosphate isomerase, Biochemistry 37, 16828-16838.
-
(1998)
Biochemistry
, vol.37
, pp. 16828-16838
-
-
Harris, T.K.1
Cole, R.N.2
Comer, F.I.3
Mildvan, A.S.4
-
12
-
-
0017030795
-
Energetics of triosephosphate isomerase: The appearance of solvent tritium in substrate dihydroxyacetone phosphate and in product
-
Herlihy, J. M., Maister, S. G., Albery, W. J., and Knowles, J. R. (1976) Energetics of triosephosphate isomerase: the appearance of solvent tritium in substrate dihydroxyacetone phosphate and in product, Biochemistry 15, 5607-5612.
-
(1976)
Biochemistry
, vol.15
, pp. 5607-5612
-
-
Herlihy, J.M.1
Maister, S.G.2
Albery, W.J.3
Knowles, J.R.4
-
15
-
-
0028197040
-
Isotopic exchange plus substrate and inhibition kinetics of D-xylose isomerase do not support a proton-transfer mechanism
-
Allen, K. N., Lavie, A., Farber, G. K., Glasfeld, A., Petsko, G. A., and Ringe, D. (1994) Isotopic exchange plus substrate and inhibition kinetics of D-xylose isomerase do not support a proton-transfer mechanism, Biochemistry 33, 1481-1487.
-
(1994)
Biochemistry
, vol.33
, pp. 1481-1487
-
-
Allen, K.N.1
Lavie, A.2
Farber, G.K.3
Glasfeld, A.4
Petsko, G.A.5
Ringe, D.6
-
16
-
-
2542578790
-
Xylose isomerase in substrate and inhibitor michaelis states: Atomic resolution studies of a metal-mediated hydride shift
-
Fenn, T. D., Ringe, D., and Petsko, G. A. (2004) Xylose isomerase in substrate and inhibitor michaelis states: Atomic resolution studies of a metal-mediated hydride shift, Biochemistry 43, 6464-6474.
-
(2004)
Biochemistry
, vol.43
, pp. 6464-6474
-
-
Fenn, T.D.1
Ringe, D.2
Petsko, G.A.3
-
17
-
-
0017817109
-
New approaches to the synthesis of 3-deoxy-3-fluoro-D-glucose
-
Tewson, T. J., and Welch, M. J. (1978) New approaches to the synthesis of 3-deoxy-3-fluoro-D-glucose, J. Org. Chem. 43, 1090-1092.
-
(1978)
J. Org. Chem.
, vol.43
, pp. 1090-1092
-
-
Tewson, T.J.1
Welch, M.J.2
-
18
-
-
0007699126
-
Uronic acid metabolism in bacteria. I. Purification and properties of uronic acid isomerase in Escherichia coli
-
Ashwell, G., Wahba, A. J., and Hickman, J. (1960) Uronic acid metabolism in bacteria. I. Purification and properties of uronic acid isomerase in Escherichia coli, J. Biol. Chem. 235, 1559-1565.
-
(1960)
J. Biol. Chem.
, vol.235
, pp. 1559-1565
-
-
Ashwell, G.1
Wahba, A.J.2
Hickman, J.3
-
19
-
-
0141853615
-
Uronic acid metabolism in bacteria. II. Purification and properties of D-altronic Acid and D-mannonic acid dehydrogenases in Escherichia coli
-
Hickman, J., and Ashwell, G. (1960) Uronic acid metabolism in bacteria. II. Purification and properties of D-altronic Acid and D-mannonic acid dehydrogenases in Escherichia coli, J. Biol. Chem. 235, 1566-1570.
-
(1960)
J. Biol. Chem.
, vol.235
, pp. 1566-1570
-
-
Hickman, J.1
Ashwell, G.2
-
20
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M. M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding, Anal. Biochem. 72, 248-254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
21
-
-
33745356391
-
Contact electron-spin coupling of nuclear magnetic moments
-
Karplus, M. (1959) Contact electron-spin coupling of nuclear magnetic moments, J. Chem. Phys. 30, 11-15.
-
(1959)
J. Chem. Phys.
, vol.30
, pp. 11-15
-
-
Karplus, M.1
-
22
-
-
0001475111
-
Intramolecular hydrogen transfer in the phosphoglucose isomerase reaction
-
Rose, I. A., and O'Connell, E. L. (1961) Intramolecular hydrogen transfer in the phosphoglucose isomerase reaction, J. Biol. Chem. 236, 3086-3092.
-
(1961)
J. Biol. Chem.
, vol.236
, pp. 3086-3092
-
-
Rose, I.A.1
O'Connell, E.L.2
-
23
-
-
4744372633
-
The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis
-
Berrisford, J. M., Akerbroom, J., Brouns, S., Sedelnikova, S. E., Turnbull, A. P., van der Oost, J., Salmon, L., Hardrś, R., Murray, I. A., Blackburn, G. M., Rice, D. W., and Baker, P. J. (2004) The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis, J. Mol. Biol. 343, 649-657.
-
(2004)
J. Mol. Biol.
, vol.343
, pp. 649-657
-
-
Berrisford, J.M.1
Akerbroom, J.2
Brouns, S.3
Sedelnikova, S.E.4
Turnbull, A.P.5
Van Der Oost, J.6
Salmon, L.7
Hardrś, R.8
Murray, I.A.9
Blackburn, G.M.10
Rice, D.W.11
Baker, P.J.12
-
24
-
-
0032403829
-
Synthesis and evaluation of a new inhibitor of phosphoglucose isomerases: The enediolate analogue 5-phospho-D-arabinohydroxamate
-
Hardré, R., Bonnette, C., Salmon, L., and Gaudemer, A. (1998) Synthesis and evaluation of a new inhibitor of phosphoglucose isomerases: the enediolate analogue 5-phospho-D-arabinohydroxamate, Bioorg. Med. Chem. Lett. 8, 3435-3438.
-
(1998)
Bioorg. Med. Chem. Lett.
, vol.8
, pp. 3435-3438
-
-
Hardré, R.1
Bonnette, C.2
Salmon, L.3
Gaudemer, A.4
-
25
-
-
0015951899
-
An activated intermediate analogue: The use of phosphoglycolohydroxamate as a stable analogue of a transiently occurring dihydroxyacetone phosphate-derived enolate in enzymatic catalysis
-
Collins, K. D. (1974) An activated intermediate analogue: The use of phosphoglycolohydroxamate as a stable analogue of a transiently occurring dihydroxyacetone phosphate-derived enolate in enzymatic catalysis, J. Biol. Chem. 249, 136-142.
-
(1974)
J. Biol. Chem.
, vol.249
, pp. 136-142
-
-
Collins, K.D.1
-
26
-
-
0014944184
-
Changes in absorption spectrum and crystal structure of triose phosphate isomerase brought about by 2-phosphoglycollate, a potential transition state analogue
-
Johnson, L. N., and Wolfenden, R. (1970) Changes in absorption spectrum and crystal structure of triose phosphate isomerase brought about by 2-phosphoglycollate, a potential transition state analogue, J. Mol. Biol. 47, 93-100.
-
(1970)
J. Mol. Biol.
, vol.47
, pp. 93-100
-
-
Johnson, L.N.1
Wolfenden, R.2
-
27
-
-
0003045576
-
Fluoromethylglyoxal: Synthesis and glyoxalase I catalyzed product partitioning via a presumed enediol intermediate
-
Kozarich, J. W., Chari, R. V. J., Wu, J. C., and Lawrence, T. L. (1981) Fluoromethylglyoxal: Synthesis and glyoxalase I catalyzed product partitioning via a presumed enediol intermediate, J. Am. Chem. Soc. 103, 4593-4595.
-
(1981)
J. Am. Chem. Soc.
, vol.103
, pp. 4593-4595
-
-
Kozarich, J.W.1
Chari, R.V.J.2
Wu, J.C.3
Lawrence, T.L.4
-
28
-
-
0038701614
-
Crystal structure of D-aminoacylase from Alcaligenes faecalis DA1. A novel subset of amidohydrolases and insights into the enzyme mechanism
-
Liaw, S. H., Chen, S. J., Ko, T. P., Hsu, C. S., Chen, C. J., Wang, A. H. J., and Tsai, Y. C. (2003) Crystal structure of D-aminoacylase from Alcaligenes faecalis DA1. A novel subset of amidohydrolases and insights into the enzyme mechanism, J. Biol. Chem. 278, 4957-4962.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 4957-4962
-
-
Liaw, S.H.1
Chen, S.J.2
Ko, T.P.3
Hsu, C.S.4
Chen, C.J.5
Wang, A.H.J.6
Tsai, Y.C.7
|