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Volumn 72, Issue 6, 2006, Pages 4329-4337

Construction of a large signature-tagged mini-Tn5 transposon library and its application to mutagenesis of Sinorhizobium meliloti

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; MICROBIOLOGY; MUTAGENESIS; NITROGEN;

EID: 33745122953     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.03072-05     Document Type: Article
Times cited : (79)

References (45)
  • 2
    • 0026320298 scopus 로고
    • The product of the Rhizobium meliloti ilvC gene is required for isoleucine and valine synthesis and nodulation of alfalfa
    • Aguilar, O. M., and D. H. Grasso. 1991. The product of the Rhizobium meliloti ilvC gene is required for isoleucine and valine synthesis and nodulation of alfalfa. J. Bacteriol. 173:7756-7764.
    • (1991) J. Bacteriol. , vol.173 , pp. 7756-7764
    • Aguilar, O.M.1    Grasso, D.H.2
  • 4
    • 23744497026 scopus 로고    scopus 로고
    • Lessons from signature-tagged mutagenesis on the infectious mechanisms of pathogenic bacteria
    • Autret, N., and A. Charbit. 2005. Lessons from signature-tagged mutagenesis on the infectious mechanisms of pathogenic bacteria. FEMS Microbiol. Rev. 29:703-717.
    • (2005) FEMS Microbiol. Rev. , vol.29 , pp. 703-717
    • Autret, N.1    Charbit, A.2
  • 5
    • 9344251110 scopus 로고    scopus 로고
    • A dual-genome Symbiosis Chip for coordinate study of signal exchange and development in a prokaryote-host interaction
    • Barnett, M. J., C. J. Toman, R. F. Fisher, and S. R. Long. 2004. A dual-genome Symbiosis Chip for coordinate study of signal exchange and development in a prokaryote-host interaction. Proc. Natl. Acad. Sci. USA 101: 16636-16641.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 16636-16641
    • Barnett, M.J.1    Toman, C.J.2    Fisher, R.F.3    Long, S.R.4
  • 6
    • 13844257623 scopus 로고    scopus 로고
    • Comprehensive metabolite profiling of Sinorhizobium meliloti using gas chromatography-mass spectrometry
    • Barsch, A., T. Patschkowski, and K. Niehaus. 2004. Comprehensive metabolite profiling of Sinorhizobium meliloti using gas chromatography-mass spectrometry. Funct. Integr. Genomics 4:219-230.
    • (2004) Funct. Integr. Genomics , vol.4 , pp. 219-230
    • Barsch, A.1    Patschkowski, T.2    Niehaus, K.3
  • 8
    • 0016231913 scopus 로고
    • R factor transfer in Rhizobium leguminosarum
    • Beringer, J. E. 1974. R factor transfer in Rhizobium leguminosarum. J. Gen. Microbiol. 84:88-98.
    • (1974) J. Gen. Microbiol. , vol.84 , pp. 88-98
    • Beringer, J.E.1
  • 10
    • 0011154916 scopus 로고
    • Mutagenesis facilitated by the removal or introduction of unique restriction sites
    • M. J. McPherson (ed.). Oxford University Press, New York, N.Y.
    • Carter, P. 1991. Mutagenesis facilitated by the removal or introduction of unique restriction sites, p. 1-25. In M. J. McPherson (ed.), Directed mutagenesis: a practical approach. Oxford University Press, New York, N.Y.
    • (1991) Directed Mutagenesis: A Practical Approach , pp. 1-25
    • Carter, P.1
  • 12
    • 0024707585 scopus 로고
    • Lipopolysaccharide mutants of Rhizobium meliloti are not defective in symbiosis
    • Clover, R. H., J. Kieber, and E. R. Signer. 1989. Lipopolysaccharide mutants of Rhizobium meliloti are not defective in symbiosis. J. Bacteriol. 171:3961-3967.
    • (1989) J. Bacteriol. , vol.171 , pp. 3961-3967
    • Clover, R.H.1    Kieber, J.2    Signer, E.R.3
  • 13
    • 0025195680 scopus 로고
    • Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria
    • de Lorenzo, V., M. Herrero, U. Jakubzik, and K. N. Timmis. 1990. Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria. J. Bacteriol. 172:6568-6572.
    • (1990) J. Bacteriol. , vol.172 , pp. 6568-6572
    • De Lorenzo, V.1    Herrero, M.2    Jakubzik, U.3    Timmis, K.N.4
  • 18
    • 32044474842 scopus 로고    scopus 로고
    • A method adapting microarray technology for signature-tagged mutagenesis of Desulfovibrio desulfuricans G20 and Shewanella oneidensis MR-1 in anaerobic sediment survival experiments
    • Groh, J. L., Q. Luo, J. D. Ballard, and L. R. Krumholz. 2005. A method adapting microarray technology for signature-tagged mutagenesis of Desulfovibrio desulfuricans G20 and Shewanella oneidensis MR-1 in anaerobic sediment survival experiments. Appl. Environ. Microbiol. 71:7064-7074.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 7064-7074
    • Groh, J.L.1    Luo, Q.2    Ballard, J.D.3    Krumholz, L.R.4
  • 19
    • 0348047326 scopus 로고    scopus 로고
    • Transposon-based strategies for microbial functional genomics and proteomics
    • Hayes, F. 2003. Transposon-based strategies for microbial functional genomics and proteomics. Annu. Rev. Genet. 37:3-29.
    • (2003) Annu. Rev. Genet. , vol.37 , pp. 3-29
    • Hayes, F.1
  • 20
    • 0029117137 scopus 로고
    • Simultaneous identification of bacterial virulence genes by negative selection
    • Hensel, M., J. E. Shea, C. Gleeson, M. D. Jones, E. Dalton, and D. W. Holden. 1995. Simultaneous identification of bacterial virulence genes by negative selection. Science 269:400-403.
    • (1995) Science , vol.269 , pp. 400-403
    • Hensel, M.1    Shea, J.E.2    Gleeson, C.3    Jones, M.D.4    Dalton, E.5    Holden, D.W.6
  • 21
    • 0025675856 scopus 로고
    • High efficiency transformation of Escherichia coli with plasmids
    • Inoue, H., H. Nojima, and H. Okayama. 1990. High efficiency transformation of Escherichia coli with plasmids. Gene 96:23-28.
    • (1990) Gene , vol.96 , pp. 23-28
    • Inoue, H.1    Nojima, H.2    Okayama, H.3
  • 23
    • 0035189384 scopus 로고    scopus 로고
    • Application of high-density array-based signature-tagged mutagenesis to discover novel Yersinia virulence-associated genes
    • Karlyshev, A. V., P. C. Oyston, K. Williams, G. C. Clark, R. W. Titball, E. A. Winzeler, and B. W. Wren. 2001. Application of high-density array-based signature-tagged mutagenesis to discover novel Yersinia virulence-associated genes. Infect. Immun. 69:7810-7819.
    • (2001) Infect. Immun. , vol.69 , pp. 7810-7819
    • Karlyshev, A.V.1    Oyston, P.C.2    Williams, K.3    Clark, G.C.4    Titball, R.W.5    Winzeler, E.A.6    Wren, B.W.7
  • 24
    • 0041429497 scopus 로고    scopus 로고
    • Tools for genetic engineering in the amino acid-producing bacterium Corynebacterium glutamicum
    • Kirchner, O., and A. Tauch. 2003. Tools for genetic engineering in the amino acid-producing bacterium Corynebacterium glutamicum. J. Biotechnol. 104: 287-299.
    • (2003) J. Biotechnol. , vol.104 , pp. 287-299
    • Kirchner, O.1    Tauch, A.2
  • 25
    • 4544275338 scopus 로고    scopus 로고
    • Global transcriptional analysis of the phosphate starvation response in Sinorhizobium meliloti strains 1021 and 2011
    • Krol, E., and A. Becker. 2004. Global transcriptional analysis of the phosphate starvation response in Sinorhizobium meliloti strains 1021 and 2011. Mol. Genet. Genomics 272:1-17.
    • (2004) Mol. Genet. Genomics , vol.272 , pp. 1-17
    • Krol, E.1    Becker, A.2
  • 26
    • 0032969363 scopus 로고    scopus 로고
    • Defined oligonucleotide tag pools and PCR screening in signature-tagged mutagenesis of essential genes from bacteria
    • Lehoux, D. E., F. Sanschagrin, and R. C. Levesque. 1999. Defined oligonucleotide tag pools and PCR screening in signature-tagged mutagenesis of essential genes from bacteria. BioTechniques 26:473-480.
    • (1999) BioTechniques , vol.26 , pp. 473-480
    • Lehoux, D.E.1    Sanschagrin, F.2    Levesque, R.C.3
  • 27
    • 0000887786 scopus 로고    scopus 로고
    • Flagella and motility
    • F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Masaganik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.). American Society for Microbiology, Washington, D.C.
    • Macnab, R. M. 1996. Flagella and motility, p. 123-145. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Masaganik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. American Society for Microbiology, Washington, D.C.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology, 2nd Ed. , pp. 123-145
    • Macnab, R.M.1
  • 28
    • 0001457509 scopus 로고
    • Some methods for classification and analysis of multivariate observations
    • L. M. Le Cam and J. Neyman (ed.). University of California Press, Berkeley
    • MacQueen, J. B. 1967. Some methods for classification and analysis of multivariate observations, p. 281-297. In L. M. Le Cam and J. Neyman (ed.), Proceedings of 5th Berkeley Symposium on Mathematical Statistics and Probability. University of California Press, Berkeley.
    • (1967) Proceedings of 5th Berkeley Symposium on Mathematical Statistics and Probability , pp. 281-297
    • MacQueen, J.B.1
  • 29
    • 0036162630 scopus 로고    scopus 로고
    • Use of signature-tagged mutagenesis in pathogenesis studies
    • Mecsas, J. 2002. Use of signature-tagged mutagenesis in pathogenesis studies. Curr. Opin. Microbiol. 5:33-37.
    • (2002) Curr. Opin. Microbiol. , vol.5 , pp. 33-37
    • Mecsas, J.1
  • 31
    • 0033053645 scopus 로고    scopus 로고
    • Constructs for insertional mutagenesis, transcriptional signal localization and gene regulation studies in root nodule and other bacteria
    • Reeve, W. G., R. P. Tiwari, P. S. Worsley, M. J. Dilworth, A. R. Glenn, and J. G. Howieson. 1999. Constructs for insertional mutagenesis, transcriptional signal localization and gene regulation studies in root nodule and other bacteria. Microbiology 145:1307-1316.
    • (1999) Microbiology , vol.145 , pp. 1307-1316
    • Reeve, W.G.1    Tiwari, R.P.2    Worsley, P.S.3    Dilworth, M.J.4    Glenn, A.R.5    Howieson, J.G.6
  • 32
    • 0345359590 scopus 로고    scopus 로고
    • Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: Genome-wide profiling of osmoadaptive gene expression
    • Rüberg, S., Z. X. Tian, E. Krol, B. Linke, F. Meyer, Y. Wang, A. Pühler, S. Weidner, and A. Becker. 2003. Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression. J. Biotechnol. 106:255-268.
    • (2003) J. Biotechnol. , vol.106 , pp. 255-268
    • Rüberg, S.1    Tian, Z.X.2    Krol, E.3    Linke, B.4    Meyer, F.5    Wang, Y.6    Pühler, A.7    Weidner, S.8    Becker, A.9
  • 33
    • 0036233408 scopus 로고    scopus 로고
    • Elevated levels of ketopantoate hydroxymethyltransferase (PanB) lead to a physiologically significant coenzyme a elevation in Salmonella enterica serovar Typhimurium
    • Rubio, A., and D. M. Downs. 2002. Elevated levels of ketopantoate hydroxymethyltransferase (PanB) lead to a physiologically significant coenzyme A elevation in Salmonella enterica serovar Typhimurium. J. Bacteriol. 184:2827-2832.
    • (2002) J. Bacteriol. , vol.184 , pp. 2827-2832
    • Rubio, A.1    Downs, D.M.2
  • 34
    • 25144476360 scopus 로고    scopus 로고
    • Signature-tagged mutagenesis: Technical advances in a negative selection method for virulence gene identification
    • Saenz, H. L., and C. Dehio. 2005. Signature-tagged mutagenesis: technical advances in a negative selection method for virulence gene identification. Curr. Opin. Microbiol. 8:612-619.
    • (2005) Curr. Opin. Microbiol. , vol.8 , pp. 612-619
    • Saenz, H.L.1    Dehio, C.2
  • 37
    • 0036302064 scopus 로고    scopus 로고
    • Peptidyl-prolyl isomerases: A new twist to transcription
    • Shaw, P. E. 2002. Peptidyl-prolyl isomerases: a new twist to transcription. EMBO Rep. 3:521-526.
    • (2002) EMBO Rep. , vol.3 , pp. 521-526
    • Shaw, P.E.1
  • 38
    • 0033792047 scopus 로고    scopus 로고
    • Signature-tagged mutagenesis in the identification in virulence genes in pathogens
    • Shea, J. E., J. D. Santangelo, and R. G. Feldman. 2000. Signature-tagged mutagenesis in the identification in virulence genes in pathogens. Curr. Opin. Microbiol. 3:451-458.
    • (2000) Curr. Opin. Microbiol. , vol.3 , pp. 451-458
    • Shea, J.E.1    Santangelo, J.D.2    Feldman, R.G.3
  • 39
    • 0029804246 scopus 로고    scopus 로고
    • Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy
    • Shoemaker, D. D., D. A. Lashkari, D. Morris, M. Mittman, and R. W. Davis. 1996. Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy. Nat. Genet. 14:450-456.
    • (1996) Nat. Genet. , vol.14 , pp. 450-456
    • Shoemaker, D.D.1    Lashkari, D.A.2    Morris, D.3    Mittman, M.4    Davis, R.W.5
  • 40
    • 0021027842 scopus 로고
    • A broad host range mobilization system for in vivo genetic engineering: Transposon mutagenesis in Gram-negative bacteria
    • Simon, R., V. Priefer, and A. Pühler. 1983. A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in Gram-negative bacteria. Biotechnology 1:784-791.
    • (1983) Biotechnology , vol.1 , pp. 784-791
    • Simon, R.1    Priefer, V.2    Pühler, A.3
  • 41
    • 0030722641 scopus 로고    scopus 로고
    • A cysG mutant strain of Rhizobium etli pleiotropically defective in sulfate and nitrate assimilation
    • Tate, R., A. Riccio, M. Iaccarino, and E. J. Patriarca. 1997. A cysG mutant strain of Rhizobium etli pleiotropically defective in sulfate and nitrate assimilation. J. Bacteriol. 179:7343-7350.
    • (1997) J. Bacteriol. , vol.179 , pp. 7343-7350
    • Tate, R.1    Riccio, A.2    Iaccarino, M.3    Patriarca, E.J.4
  • 43
    • 0003338719 scopus 로고    scopus 로고
    • Phosphorus assimilation and control of the phosphate regulon
    • F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Masaganik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.). American Society for Microbiology, Washington, D.C.
    • Wanner, B. L. 1996. Phosphorus assimilation and control of the phosphate regulon, p. 1357-1381. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Masaganik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. American Society for Microbiology, Washington, D.C.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology, 2nd Ed. , pp. 1357-1381
    • Wanner, B.L.1
  • 45
    • 1342294092 scopus 로고    scopus 로고
    • Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
    • Yang, Y. H., S. Dudoit, P. Luu, D. M. Lin, V. Peng, J. Ngai, and T. P. Speed. 2002. Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res. 30:e15.
    • (2002) Nucleic Acids Res. , vol.30
    • Yang, Y.H.1    Dudoit, S.2    Luu, P.3    Lin, D.M.4    Peng, V.5    Ngai, J.6    Speed, T.P.7


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