Heterogeneity of cytokine single-nucleotide polymorphisms among the Iranian and in the other East-South Asian populations

Transfusion Medicine

Volumn 16, Issue 3, 2006, Pages 192-199

  Bagheri, M ^a   Abdi Rad, I ^a   Omrani, D ^a   Khalkhali, H R ^a  

^a Uremia University   (Iran)

Author keywords

Cytokine gene polymorphism; Iran; SNP

Indexed keywords

CYTOKINE; GAMMA INTERFERON; INTERLEUKIN 1 RECEPTOR; INTERLEUKIN 10; INTERLEUKIN 12; INTERLEUKIN 1ALPHA; INTERLEUKIN 1BETA; INTERLEUKIN 2; INTERLEUKIN 4; INTERLEUKIN 4 RECEPTOR ALPHA; INTERLEUKIN 6; TRANSFORMING GROWTH FACTOR BETA; TUMOR NECROSIS FACTOR ALPHA;

ALLELE; ARTICLE; ASIAN; CONTROLLED STUDY; GENE FREQUENCY; GENE SEQUENCE; GENETIC HETEROGENEITY; GENOTYPE; HUMAN; IRAN; NORMAL HUMAN; POLYMERASE CHAIN REACTION; POPULATION GENETICS; SEQUENCE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM;

ASIA, SOUTHEASTERN; CYTOKINES; EPIDEMIOLOGY, MOLECULAR; GENE FREQUENCY; GENETIC HETEROGENEITY; HUMANS; IRAN; POLYMORPHISM, SINGLE NUCLEOTIDE;

EID: 33744938682     PISSN: 09587578     EISSN: 13653148     Source Type: Journal    
DOI: 10.1111/j.1365-3148.2006.00666.x     Document Type: Article

References (34)

1. Amirzargar A.A. Bagheri M. Ghavamzadeh A. Alimoghaddam K. Khosravi F. Nicknam M.H. Moheydin M. Ansaripour B. Moradi B. Nikbin B. 2005 Cytokine gene polymorphism in Iranian patients with chronic myelogenous leukemia. International Journal of Immunogenetics, 32, 167 171.
2. Amirzargar A.A. Danesh A.A. Khosravi F. Niknam M.H. Nikbin B. 2004 Cytokine gene polymorphisms in Iranian patients with pulmonary Tuberculosis. Iranian Journal of Immunology, 1, 125 129.
3. Bagheri M. Amirzargar A.A. Ghavamzadeh A. Alimoghaddam K. Khosravi F. Ansaripour B. Moradi B. Nikbin B. 2005 Cytokine gene polymorphism in Iranian patients with β-thalassemia. Iranian Journal of Immunology, 2, 43 49.
4. Bellwood P. 1991 The Austronesian dispersal and the origin of languages. Science America, 265, 88 93.
5. Bidwell J. Keen L. Gallagher G. Kimberly R. Huizinga T. McDermott M.F. Oksenberg J. McNicholl J. Pociot F. Hardt C. Alfonso S.D. 2001 Cytokine gene polymorphism in human disease: on-line databases. Genes Immunity, 2, 61 70.
6. Cox E.D. Hoffmann S.C. DiMercurio B.S. Wesley R. Harlan D.M. Kirk A.D. Blair P.J. 2001 Cytokine polymorphic analyses indicate ethnic differences in the allelic distribution of interleukin-2 and interleukin-6. Transplantation, 72, 720 726.
7. Costeas P.A. Koumas L. Koumouli A. Kyriakou-Giantsiou A. Papaloizou A. 2003 Cytokine polymorphism frequencies in the Greek Cypriot population. European Journal of Immunogenetics, 30, 341 343.
8. Dickinson A.M. Cavet J. Cullup H. Wang X.N. Jarvis M. Sviland L. Middleton P.G. 2002 Predicting outcome in hematological stem cell transplantation. Archivum Immuniologiate et Therapiae Experimentalis, 50, 371 378.
9. Higuchi T. Seki N. Kamizono S. Yamada A. Kimura A. Kato H. Itoh K. 1998 Polymorphism of the 50-flanking region of the human tumor necrosis factor (TNF)-alpha gene in Japanese. Tissue Antigens, 51, 605 612.
10. Hoffmann S.C. Stanley E. Cox E.D. Craighead N. Mercurio B.S. Koziol D.E. Harlan D.M. Kirk A.D. Blair P.J. 2001 Association of cytokine polymorphic inheritance and in vitro cytokine production in anti-CD3/CD28 stimulated peripheral blood lymphocytes. Transplantation, 72, 1444 1450.
11. Hoffmann S.C. Stanley E.M. Cox E.D. DiMercurio B.S. Koziol D.E. Harlan D.M. Kirk A.D. Blair P.J. 2002 Ethnicity greatly influences cytokine gene polymorphism distribution. American Journal of Transplantation, 2, 560 567.
12. Kato S. Onda M. Yamada S. Matsuda N. Tokunaga A. Matsukura N. 2001 Association of the interleukin-1 beta genetic polymorphism and gastric cancer risk in Japanese. Journal of Gastroenterology, 36, 696 699.
13. Kawaguchi Y. Tochimoto A. Ichikawa N. Harigai M. Hara M. Kotake S. Kitamura Y. Kamatani N. 2003 Association of IL1A gene polymorphisms with susceptibility to and severity of systemic sclerosis in the Japanese population. Arthritis and Rheumatism, 48, 186 192.
14. Lin M. Chu C.C. Chang S.L. Lee H.L. Loo J.H. Akaza T. Juji T. Ohashi J. Tokunaga K. 2001 The origin of Minnan and Hakka, the so-called 'Taiwanese', inferred by HLA study. Tissue Antigens, 57, 192 199.
15. Lin M. Chu C.C. Lee H.L. Chang. S.L. Ohashi J. Tokunaga K. Akaza T. Juji T. 2000 Heterogeneity of Taiwan's indigenous population: possible relation to prehistoric Mongoloid dispersals. Tissue Antigens, 55, 1 9.
16. Loughrey B.V. Maxwell A.P. Fogarty D.G. Middleton D. Harron J.C. Patterson C.C. Darke C. Savage D.A. 1998 An interleukin 1B allele, which correlates with a high secretor phenotype, is associated with diabetic nephropathy. Cytokine, 10, 984 988.
17. Louie L. 2002 Cytokine polymorphism workshop component anthropology of cytokine gene variation. In: HLA 2002, Immunobiology of the Human MHC. Proceedings of the 13th International Histocompatibility Workshop and Conferences (Vol 2) (eds, Hsmsen J.A. Dupont B., IHWG, Victoria, BC, Canada and Seattle, WA, USA.
18. Marshal S. McLaren A.J. McKinney E.F. Bird T. Haldar N.A. Bunce M. Morris P.J. Welsh K.I. 2001 Donor cytokine genotype influences the development of acute rejection after renal transplantation. Transplantation, 71, 469 476.
19. Meenagh A. Williams F. Ross O.A. Patterson C. Gorodezky C. Hammond M. Leheny W.A. Middleton D. 2002 Frequency of cytokine polymorphisms in populations from western Europe, Africa, Asia, the Middle East and South America. Human Immunology, 63, 1055 1061.
20. Miller S.A. Dykes D.D. Polesky H.F. 1988 A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Research, 16, 1215.
21. Mok C.C. Lanchbury J.S. Chan D.W. Lau C.S. 1998 Interleukin-10 promoter polymorphisms in Southern Chinese patients with systemic lupus erythematosus. Arthritis and Rheumatism, 41, 1090 1095.
22. Nei M. Tajima F. Tateno Y. 1983 Accuracy of estimated phylogenetic trees from molecular data. II. Gene frequency data. Journal of Molecular Evolution, 19, 153 170.
23. Noguchi E. Shibasaki M. Arinami T. Takeda K. Kobayashi K. Matsui A. Hamaguchi H. 1998 Association of asthma and the interleukin-4 promoter gene in Japanese. Clinical Experimental Allergy, 28, 449 453.
24. Ozaki K. Leonard W.J. 2002 Cytokine and cytokine receptor pleiotropy and redundency. Journal of Biology and Chemistry, 277, 29355 29358.
25. Park K.S. Kim M.Y. Mok J.W. 1997 NcoI restriction fragment length polymorphism at -308 of the tumor necrosis factor alpha (TNFA) promoter region in Korean. Japan Journal of Human Genetics, 42, 241 247.
26. Perrey C. Pravica V. Sinnott P.J. Hutchinson J.V. 1998 Genotyping for polymorphism in interferon?, Interleukin 10, transforming growth factor β1 and tumor necrosis factor β gene: a technical report. Transplantation and Immunology, 6, 193 197.
27. Reynard M.P. Turner D. Navarrete C.V. 2000 Allele frequencies of polymorphisms of the tumour necrosis factor-alpha, interleukin-10, interferon-gamma and interleukin-2 genes in a North European Caucasoid group from the UK. European Journal of Immunogenetics, 27, 241 249.
28. Rook G.A. Stanford J.L. 1992 Slow bacterial infections or autoimmunity? Immunology Today, 13, 160 164.
29. Rosenwasser L.J. Klemm D.J. Dresback J.K. Inamura H. Mascali J.J. Klinnert M. Borish L. 1995 Promoter polymorphisms in the chromosome 5 gene cluster in asthma and atopy. Clinical Experimental Allergy, 25, 74 78.
30. Sankaran D. Asderakis A. Ashraf S. Roberts I.S. Short C.D. Dyer P.A. Sinnott P.J. Hutchinson I.V. 1999 Cytokine gene polymorphisms predict acute graft rejection following renal transplantation. Kidney International, 56, 281 288.
31. Trejaut J.A. Tsai Z.U. Lee H.L. Chen Z.X. Lin M. 2004 Cytokine gene polymorphisms in Taiwan. Tissue Antigens, 64, 492 499.
32. Tsang C.H. 2001 The Prehistory of Taiwan: A Brief Introduction. Seventeenth Congress of the Indo-Pacific Prehistory Association. Academia Sinica, Taiwan.
33. Uboldi M.C. Dametto E. Fasano M.E. Rendine S. Curtoni E.S. 2003 Genotyping for cytokine polymorphisms: allele frequencies in the Italian population. European Journal of Immunogenetics, 30, 5 10.
34. Yea S.S. Yang Y.I. Jang W.H. Lee Y.J. Bae H.S. Paik K.H. 2001 Association between TNF-a promoter polymorphism and Helicobacter pylori cagA subtype infection. Journal of Clinical Pathology, 54, 703 706.