메뉴 건너뛰기




Volumn 87, Issue 6, 2006, Pages 1459-1464

Genotyping hepatitis B virus from whole- and sub-genomic fragments using position-specific scoring matrices in HBV STAR

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ANALYZER; ARTICLE; COMPUTER INTERFACE; COMPUTER PROGRAM; GENE IDENTIFICATION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC VARIABILITY; GENOTYPE; HEPATITIS B VIRUS; INFECTION RATE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PREDICTION; PRIORITY JOURNAL; PROMOTER REGION; RECEIVER OPERATING CHARACTERISTIC; SEQUENCE ANALYSIS; VIRAL GENETICS; VIRUS GENOME; VIRUS TYPING;

EID: 33744811659     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/vir.0.81734-0     Document Type: Article
Times cited : (45)

References (14)
  • 1
    • 0020981962 scopus 로고
    • Monoclonal antibodies to HBsAg: A study of their specificities for eight different HBsAg subtypes
    • Couroucé, A.-M., Lee, H., Drouet, J., Canavaggio, M. & Soulier, J. P. (1983). Monoclonal antibodies to HBsAg: a study of their specificities for eight different HBsAg subtypes. Dev Biol Stand 54, 527-534.
    • (1983) Dev Biol Stand , vol.54 , pp. 527-534
    • Couroucé, A.-M.1    Lee, H.2    Drouet, J.3    Canavaggio, M.4    Soulier, J.P.5
  • 2
    • 0034968926 scopus 로고    scopus 로고
    • Resistance of hepatitis B virus to antiviral drugs: Current aspects and directions for future investigation
    • Delaney, W. E., IV, Locarnini, S. & Shaw, T. (2001). Resistance of hepatitis B virus to antiviral drugs: current aspects and directions for future investigation. Antivir Chem Chemother 12, 1-35.
    • (2001) Antivir Chem Chemother , vol.12 , pp. 1-35
    • Delaney IV, W.E.1    Locarnini, S.2    Shaw, T.3
  • 3
    • 0035115032 scopus 로고    scopus 로고
    • Hepatitis B virus genotype distribution among chronic hepatitis B virus carriers in Shanghai, China
    • Ding, X., Mizokami, M., Yao, G., Xu, B., Orito, E., Ueda, R. & Nakanishi, M. (2001). Hepatitis B virus genotype distribution among chronic hepatitis B virus carriers in Shanghai, China. Intervirology 44, 43-47.
    • (2001) Intervirology , vol.44 , pp. 43-47
    • Ding, X.1    Mizokami, M.2    Yao, G.3    Xu, B.4    Orito, E.5    Ueda, R.6    Nakanishi, M.7
  • 4
    • 0029901637 scopus 로고    scopus 로고
    • Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods
    • Felsenstein, J. (1996). Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods. Methods Enzymol 266, 418-427.
    • (1996) Methods Enzymol , vol.266 , pp. 418-427
    • Felsenstein, J.1
  • 6
    • 2642513126 scopus 로고    scopus 로고
    • Development of a novel human immunodeficiency virus type I subtyping tool, Subtype Analyzer (STAR): Analysis of subtype distribution in London
    • Gale, C. V., Myers, R., Tedder, R. S., Williams, I. G. & Kellam, P. (2004). Development of a novel human immunodeficiency virus type 1 subtyping tool, Subtype Analyzer (STAR): analysis of subtype distribution in London. AIDS Res Hum Retroviruses 20, 457-464.
    • (2004) AIDS Res Hum Retroviruses , vol.20 , pp. 457-464
    • Gale, C.V.1    Myers, R.2    Tedder, R.S.3    Williams, I.G.4    Kellam, P.5
  • 7
    • 84984535720 scopus 로고    scopus 로고
    • Hepatitis B genotypes correlate with clinical outcomes in patients with chronic hepatitis B
    • Kao, J. H., Chen, P. J., Lai, M. Y. & Chen, D. S. (2000). Hepatitis B genotypes correlate with clinical outcomes in patients with chronic hepatitis B. Gastroenterology 118, 554-559.
    • (2000) Gastroenterology , vol.118 , pp. 554-559
    • Kao, J.H.1    Chen, P.J.2    Lai, M.Y.3    Chen, D.S.4
  • 8
    • 0037443950 scopus 로고    scopus 로고
    • Prevalence and clinical correlates of YMDD variants during lamivudine therapy for patients with chronic hepatitis B
    • & 7 other authors
    • Lai, C.-L., Dienstag, J., Schiff, E. & 7 other authors (2003). Prevalence and clinical correlates of YMDD variants during lamivudine therapy for patients with chronic hepatitis B. Clin Infect Dis 36, 687-696.
    • (2003) Clin Infect Dis , vol.36 , pp. 687-696
    • Lai, C.-L.1    Dienstag, J.2    Schiff, E.3
  • 9
    • 0028222146 scopus 로고
    • Mutations in the precore region of hepatitis B virus serve to enhance the stability of the secondary structure of the pre-genome encapsidation signal
    • Lok, A. S. F., Akarca, U. & Greene, S. (1994). Mutations in the precore region of hepatitis B virus serve to enhance the stability of the secondary structure of the pre-genome encapsidation signal. Proc Natl Acad Sci U S A 91, 4077-4081.
    • (1994) Proc Natl Acad Sci U S A , vol.91 , pp. 4077-4081
    • Lok, A.S.F.1    Akarca, U.2    Greene, S.3
  • 10
    • 0032889281 scopus 로고    scopus 로고
    • Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination
    • Lole, K. S., Bollinger, R. C., Paranjape, R. S., Gadkari, D., Kulkarni,S. S., Novak, N. G., Ingersoll, R., Sheppard, H. W. & Ray, S. C. (1999). Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J Virol 73, 152-160.
    • (1999) J Virol , vol.73 , pp. 152-160
    • Lole, K.S.1    Bollinger, R.C.2    Paranjape, R.S.3    Gadkari, D.4    Kulkarni, S.S.5    Novak, N.G.6    Ingersoll, R.7    Sheppard, H.W.8    Ray, S.C.9
  • 11
    • 24144500828 scopus 로고    scopus 로고
    • A statistical model for HIV-1 sequence classification using the subtype analyser (STAR)
    • Myers, R. E., Gale, C. V., Harrison, A., Takeuchi, Y. & Kellam, P. (2005). A statistical model for HIV-1 sequence classification using the subtype analyser (STAR). Bioinformatics 21, 3535-3540.
    • (2005) Bioinformatics , vol.21 , pp. 3535-3540
    • Myers, R.E.1    Gale, C.V.2    Harrison, A.3    Takeuchi, Y.4    Kellam, P.5
  • 13
    • 4344627233 scopus 로고    scopus 로고
    • Clinical emergence of entecavir-resistant hepatitis B virus requires additional substitutions in virus already resistant to lamivudine
    • & 14 other authors
    • Tenney, D. J., Levine, S. M., Rose, R. E. & 14 other authors (2004). Clinical emergence of entecavir-resistant hepatitis B virus requires additional substitutions in virus already resistant to lamivudine. Antimicrob Agents Chemother 48, 3498-3507.
    • (2004) Antimicrob Agents Chemother , vol.48 , pp. 3498-3507
    • Tenney, D.J.1    Levine, S.M.2    Rose, R.E.3
  • 14
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.