-
1
-
-
18244393431
-
Natural selection drives recurrent formation of activating killer cell immunoglobulin-like receptor and Ly49 from inhibitory homologues
-
Abi-Rached L, Parham P (2005) Natural selection drives recurrent formation of activating killer cell immunoglobulin-like receptor and Ly49 from inhibitory homologues. J Exp Med 201:1319-1332
-
(2005)
J Exp Med
, vol.201
, pp. 1319-1332
-
-
Abi-Rached, L.1
Parham, P.2
-
3
-
-
13444304332
-
The Vertebrate Genome Annotation (Vega) database
-
Ashurst JL, Chen CK, Gilbert JG, Jekosch K, Keenan S, Meidl P, Searle SM, Stalker J, Storey R, Trevanion S, Wilming L, Hubbard T (2005) The Vertebrate Genome Annotation (Vega) database. Nucleic Acids Res 33:D459-D465
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Ashurst, J.L.1
Chen, C.K.2
Gilbert, J.G.3
Jekosch, K.4
Keenan, S.5
Meidl, P.6
Searle, S.M.7
Stalker, J.8
Storey, R.9
Trevanion, S.10
Wilming, L.11
Hubbard, T.12
-
4
-
-
0023462732
-
Random cloning and sequencing by the M13/dideoxynucleotide chain termination method
-
Bankier AT, Weston KM, Barrell BG (1987) Random cloning and sequencing by the M13/dideoxynucleotide chain termination method. Methods Enzymol 155:51-93
-
(1987)
Methods Enzymol
, vol.155
, pp. 51-93
-
-
Bankier, A.T.1
Weston, K.M.2
Barrell, B.G.3
-
6
-
-
0035889968
-
Comparison of chimpanzee and human leukocyte Ig-like receptor genes reveals framework and rapidly evolving genes
-
Canavez F, Young NT, Guethlein LA, Rajalingam R, Khakoo SI, Shum BP, Parham P (2001) Comparison of chimpanzee and human leukocyte Ig-like receptor genes reveals framework and rapidly evolving genes. J Immunol 167:5786-5794
-
(2001)
J Immunol
, vol.167
, pp. 5786-5794
-
-
Canavez, F.1
Young, N.T.2
Guethlein, L.A.3
Rajalingam, R.4
Khakoo, S.I.5
Shum, B.P.6
Parham, P.7
-
7
-
-
0036167549
-
Isolation of porcine expressed sequence tags for the construction of a first genomic transcript map of the skeletal muscle in pig
-
Davoli R, Fontanesi L, Zambonelli P, Bigi D, Gellin J, Yerle M, Milc J, Braglia S, Cenci V, Cagnazzo M, Russo V (2002) Isolation of porcine expressed sequence tags for the construction of a first genomic transcript map of the skeletal muscle in pig. Anim Genet 33:3-18
-
(2002)
Anim Genet
, vol.33
, pp. 3-18
-
-
Davoli, R.1
Fontanesi, L.2
Zambonelli, P.3
Bigi, D.4
Gellin, J.5
Yerle, M.6
Milc, J.7
Braglia, S.8
Cenci, V.9
Cagnazzo, M.10
Russo, V.11
-
8
-
-
33644527263
-
Perforin expression can define CD8 positive lymphocyte subsets in pigs allowing phenotypic and functional analysis of Natural Killer, Cytotoxic T, Natural Killer T and MHC unrestricted cytotoxic T-cells
-
Denyer MS, Wileman TE, Stirling CM, Zuber B, Takamatsu HH (2006) Perforin expression can define CD8 positive lymphocyte subsets in pigs allowing phenotypic and functional analysis of Natural Killer, Cytotoxic T, Natural Killer T and MHC unrestricted cytotoxic T-cells. Vet Immunol Immunopathol 110:325-330
-
(2006)
Vet Immunol Immunopathol
, vol.110
, pp. 325-330
-
-
Denyer, M.S.1
Wileman, T.E.2
Stirling, C.M.3
Zuber, B.4
Takamatsu, H.H.5
-
9
-
-
0031955518
-
Base-calling of automated sequencer traces using phred. I. Accuracy assessment
-
Ewing B, Hillier L, Wendl MC, Green P (1998) Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 8:175-185
-
(1998)
Genome Res
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
Green, P.4
-
10
-
-
0030931534
-
Structure of the inhibitory receptor for human natural killer cells resembles haematopoietic receptors
-
Fan QR, Mosyak L, Winter CC, Wagtmann N, Long EO, Wiley DC (1997) Structure of the inhibitory receptor for human natural killer cells resembles haematopoietic receptors. Nature 389:96-100
-
(1997)
Nature
, vol.389
, pp. 96-100
-
-
Fan, Q.R.1
Mosyak, L.2
Winter, C.C.3
Wagtmann, N.4
Long, E.O.5
Wiley, D.C.6
-
12
-
-
0036644075
-
NK cell receptors of the orangutan (Pongo pygmaeus): A pivotal species for tracking the coevolution of killer cell Ig-like receptors with MHC-C
-
Guethlein LA, Flodin LR, Adams EJ, Parham P (2002) NK cell receptors of the orangutan (Pongo pygmaeus): a pivotal species for tracking the coevolution of killer cell Ig-like receptors with MHC-C. J Immunol 169:220-229
-
(2002)
J Immunol
, vol.169
, pp. 220-229
-
-
Guethlein, L.A.1
Flodin, L.R.2
Adams, E.J.3
Parham, P.4
-
13
-
-
0035313243
-
Diversity of the killer cell Ig-like receptors of rhesus monkeys
-
Hershberger KL, Shyam R, Miura A, Letvin NL (2001) Diversity of the killer cell Ig-like receptors of rhesus monkeys. J Immunol 166:4380-4390
-
(2001)
J Immunol
, vol.166
, pp. 4380-4390
-
-
Hershberger, K.L.1
Shyam, R.2
Miura, A.3
Letvin, N.L.4
-
14
-
-
0037372587
-
Cutting edge: Molecular cloning of a killer cell Ig-like receptor in the mouse and rat
-
Hoelsbrekken SE, Nylenna O, Saether PC, Slettedal IO, Ryan JC, Fossum S, Dissen E (2003) Cutting edge: molecular cloning of a killer cell Ig-like receptor in the mouse and rat. J Immunol 170:2259-2263
-
(2003)
J Immunol
, vol.170
, pp. 2259-2263
-
-
Hoelsbrekken, S.E.1
Nylenna, O.2
Saether, P.C.3
Slettedal, I.O.4
Ryan, J.C.5
Fossum, S.6
Dissen, E.7
-
15
-
-
33646942320
-
Comparative genomics of natural killer cell receptor gene clusters
-
Kelley J, Walter L, Trowsdale J (2005) Comparative genomics of natural killer cell receptor gene clusters. PLoS Genet 1:129-139
-
(2005)
PLoS Genet
, vol.1
, pp. 129-139
-
-
Kelley, J.1
Walter, L.2
Trowsdale, J.3
-
16
-
-
0033667771
-
Rapid evolution of NK cell receptor systems demonstrated by comparison of chimpanzees and humans
-
Khakoo SI, Rajalingam R, Shum BP, Weidenbach K, Flodin L, Muir DG, Canavez F, Cooper SL, Valiante NM, Lanier LL, Parham P (2000) Rapid evolution of NK cell receptor systems demonstrated by comparison of chimpanzees and humans. Immunity 12:687-698
-
(2000)
Immunity
, vol.12
, pp. 687-698
-
-
Khakoo, S.I.1
Rajalingam, R.2
Shum, B.P.3
Weidenbach, K.4
Flodin, L.5
Muir, D.G.6
Canavez, F.7
Cooper, S.L.8
Valiante, N.M.9
Lanier, L.L.10
Parham, P.11
-
17
-
-
0018130305
-
Natural killing and antibody-dependent cellular cytotoxicity are independent immune functions in the Minnesota miniature swine
-
USA
-
Koren HS, Amos DB, Kim YB (1978) Natural killing and antibody-dependent cellular cytotoxicity are independent immune functions in the Minnesota miniature swine. Proc Natl Acad Sci USA 75:5127-5131
-
(1978)
Proc Natl Acad Sci
, vol.75
, pp. 5127-5131
-
-
Koren, H.S.1
Amos, D.B.2
Kim, Y.B.3
-
18
-
-
0036139211
-
MEGA2: Molecular evolutionary genetics analysis software
-
Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17:1244-1245
-
(2001)
Bioinformatics
, vol.17
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
19
-
-
0035901592
-
Evolution of natural killer cell receptors: Coexistence of functional Ly49 and KIR genes in baboons
-
Mager DL, McQueen KL, Wee V, Freeman JD (2001) Evolution of natural killer cell receptors: coexistence of functional Ly49 and KIR genes in baboons. Curr Biol 11:626-630
-
(2001)
Curr Biol
, vol.11
, pp. 626-630
-
-
Mager, D.L.1
McQueen, K.L.2
Wee, V.3
Freeman, J.D.4
-
20
-
-
0031263075
-
High throughput fingerprint analysis of large-insert clones
-
Marra MA, Kucaba TA, Dietrich NL, Green ED, Brownstein B, Wilson RK, McDonald KM, Hillier LW, McPherson JD, Waterston RH (1997) High throughput fingerprint analysis of large-insert clones. Genome Res 7:1072-1084
-
(1997)
Genome Res
, vol.7
, pp. 1072-1084
-
-
Marra, M.A.1
Kucaba, T.A.2
Dietrich, N.L.3
Green, E.D.4
Brownstein, B.5
Wilson, R.K.6
McDonald, K.M.7
Hillier, L.W.8
McPherson, J.D.9
Waterston, R.H.10
-
21
-
-
0042855734
-
Killer-cell immunoglobulin-like receptor (KIR) nomenclature report, 2002
-
Marsh SG, Parham P, Dupont B, Geraghty DE, Trowsdale J, Middleton D, Vilches C, Carrington M, Witt C, Guethlein LA, Shilling H, Garcia CA, Hsu KC, Wain H (2003) Killer-cell immunoglobulin-like receptor (KIR) nomenclature report, 2002. Immunogenetics 55:220-226
-
(2003)
Immunogenetics
, vol.55
, pp. 220-226
-
-
Marsh, S.G.1
Parham, P.2
Dupont, B.3
Geraghty, D.E.4
Trowsdale, J.5
Middleton, D.6
Vilches, C.7
Carrington, M.8
Witt, C.9
Guethlein, L.A.10
Shilling, H.11
Garcia, C.A.12
Hsu, K.C.13
Wain, H.14
-
22
-
-
0042931290
-
Cutting edge: Expansion of the KIR locus by unequal crossing over
-
Martin MP, Bashirova A, Traherne J, Trowsdale J, Carrington M (2003) Cutting edge: expansion of the KIR locus by unequal crossing over. J Immunol 171:2192-2195
-
(2003)
J Immunol
, vol.171
, pp. 2192-2195
-
-
Martin, M.P.1
Bashirova, A.2
Traherne, J.3
Trowsdale, J.4
Carrington, M.5
-
23
-
-
2942552479
-
Comparative genomic analysis, diversity and evolution of two KIR haplotypes A and B
-
Martin AM, Kulski JK, Gaudieri S, Witt CS, Freitas EM, Trowsdale J, Christiansen FT (2004) Comparative genomic analysis, diversity and evolution of two KIR haplotypes A and B. Gene 335:121-131
-
(2004)
Gene
, vol.335
, pp. 121-131
-
-
Martin, A.M.1
Kulski, J.K.2
Gaudieri, S.3
Witt, C.S.4
Freitas, E.M.5
Trowsdale, J.6
Christiansen, F.T.7
-
24
-
-
0036210439
-
Evolution of NK receptors: A single Ly49 and multiple KIR genes in the cow
-
McQueen KL, Wilhelm BT, Harden KD, Mager DL (2002) Evolution of NK receptors: a single Ly49 and multiple KIR genes in the cow. Eur J Immunol 32:810-817
-
(2002)
Eur J Immunol
, vol.32
, pp. 810-817
-
-
McQueen, K.L.1
Wilhelm, B.T.2
Harden, K.D.3
Mager, D.L.4
-
25
-
-
17144363242
-
Understanding how combinations of HLA and KIR genes influence disease
-
Rajagopalan S, Long EO (2005) Understanding how combinations of HLA and KIR genes influence disease. J Exp Med 201:1025-1029
-
(2005)
J Exp Med
, vol.201
, pp. 1025-1029
-
-
Rajagopalan, S.1
Long, E.O.2
-
26
-
-
0035182139
-
Short KIR haplotypes in pygmy chimpanzee (Bonobo) resemble the conserved framework of diverse human KIR haplotypes
-
Rajalingam R, Hong M, Adams EJ, Shum BP, Guethlein LA, Parham P (2001) Short KIR haplotypes in pygmy chimpanzee (Bonobo) resemble the conserved framework of diverse human KIR haplotypes. J Exp Med 193:135-146
-
(2001)
J Exp Med
, vol.193
, pp. 135-146
-
-
Rajalingam, R.1
Hong, M.2
Adams, E.J.3
Shum, B.P.4
Guethlein, L.A.5
Parham, P.6
-
27
-
-
0346734184
-
Domain shuffling has been the main mechanism forming new hominoid killer cell Ig-like receptors
-
Rajalingam R, Parham P, Abi-Rached L (2004) Domain shuffling has been the main mechanism forming new hominoid killer cell Ig-like receptors. J Immunol 172:356-369
-
(2004)
J Immunol
, vol.172
, pp. 356-369
-
-
Rajalingam, R.1
Parham, P.2
Abi-Rached, L.3
-
28
-
-
0034201441
-
EMBOSS: The European Molecular Biology Open Software Suite
-
Rice P, Longden I, Bleasby A (2000) EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 16:276-277
-
(2000)
Trends Genet
, vol.16
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
29
-
-
0030830552
-
New dye-labeled terminators for improved DNA sequencing patterns
-
Rosenblum BB, Lee LG, Spurgeon SL, Khan SH, Menchen SM, Heiner CR, Chen SM (1997) New dye-labeled terminators for improved DNA sequencing patterns. Nucleic Acids Res 25:4500-4504
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4500-4504
-
-
Rosenblum, B.B.1
Lee, L.G.2
Spurgeon, S.L.3
Khan, S.H.4
Menchen, S.M.5
Heiner, C.R.6
Chen, S.M.7
-
30
-
-
0033635022
-
Artemis: Sequence visualization and annotation
-
Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, Rajandream MA, Barrell B (2000) Artemis: sequence visualization and annotation. Bioinformatics 16:944-945
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
Rajandream, M.A.6
Barrell, B.7
-
31
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
32
-
-
12744280956
-
Single haplotype analysis demonstrates rapid evolution of the killer immunoglobulin-like receptor (KIR) loci in primates
-
Sambrook JG, Bashirova A, Palmer S, Sims S, Trowsdale J, Abi-Rached L, Parham P, Carrington M, Beck S (2005) Single haplotype analysis demonstrates rapid evolution of the killer immunoglobulin-like receptor (KIR) loci in primates. Genome Res 15:25-35
-
(2005)
Genome Res
, vol.15
, pp. 25-35
-
-
Sambrook, J.G.1
Bashirova, A.2
Palmer, S.3
Sims, S.4
Trowsdale, J.5
Abi-Rached, L.6
Parham, P.7
Carrington, M.8
Beck, S.9
-
33
-
-
0017681196
-
DNA sequencing with chain-terminating inhibitors
-
USA
-
Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463-5467
-
(1977)
Proc Natl Acad Sci
, vol.74
, pp. 5463-5467
-
-
Sanger, F.1
Nicklen, S.2
Coulson, A.R.3
-
35
-
-
0038068041
-
Natural killer cell receptors in cattle: A bovine killer cell immunoglobulin-like receptor multigene family contains members with divergent signaling motifs
-
Storset AK, Slettedal IO, Williams JL, Law A, Dissen E (2003) Natural killer cell receptors in cattle: a bovine killer cell immunoglobulin-like receptor multigene family contains members with divergent signaling motifs. Eur J Immunol 33:980-990
-
(2003)
Eur J Immunol
, vol.33
, pp. 980-990
-
-
Storset, A.K.1
Slettedal, I.O.2
Williams, J.L.3
Law, A.4
Dissen, E.5
-
36
-
-
1642314779
-
Natural killer cell receptors in the horse: Evidence for the existence of multiple transcribed LY49 genes
-
Takahashi T, Yawata M, Raudsepp T, Lear TL, Chowdhary BP, Antczak DF, Kasahara M (2004) Natural killer cell receptors in the horse: evidence for the existence of multiple transcribed LY49 genes. Eur J Immunol 34:773-784
-
(2004)
Eur J Immunol
, vol.34
, pp. 773-784
-
-
Takahashi, T.1
Yawata, M.2
Raudsepp, T.3
Lear, T.L.4
Chowdhary, B.P.5
Antczak, D.F.6
Kasahara, M.7
-
37
-
-
0034900535
-
Genesis of the ILT/LIR/ MIR clusters within the human leukocyte receptor complex
-
Volz A, Wende H, Laun K, Ziegler A (2001) Genesis of the ILT/LIR/ MIR clusters within the human leukocyte receptor complex. Immunol Rev 181:39-51
-
(2001)
Immunol Rev
, vol.181
, pp. 39-51
-
-
Volz, A.1
Wende, H.2
Laun, K.3
Ziegler, A.4
-
38
-
-
0345549523
-
Identification of the mouse killer immunoglobulin-like receptor-like (Kirl) gene family mapping to chromosome X
-
Welch AY, Kasahara M, Spain LM (2003) Identification of the mouse killer immunoglobulin-like receptor-like (Kirl) gene family mapping to chromosome X. Immunogenetics 54:782-790
-
(2003)
Immunogenetics
, vol.54
, pp. 782-790
-
-
Welch, A.Y.1
Kasahara, M.2
Spain, L.M.3
-
39
-
-
0032806019
-
Organization of the leukocyte receptor cluster (LRC) on human chromosome 19q13.4
-
Wende H, Colonna M, Ziegler A, Volz A (1999) Organization of the leukocyte receptor cluster (LRC) on human chromosome 19q13.4. Mamm Genome 10:154-160
-
(1999)
Mamm Genome
, vol.10
, pp. 154-160
-
-
Wende, H.1
Colonna, M.2
Ziegler, A.3
Volz, A.4
-
40
-
-
23444460778
-
Pigs in sequence space: A 0.66X coverage pig genome survey based on shotgun sequencing
-
Wernersson R, Schierup MH, Jorgensen FG, Gorodkin J, Panitz F, Staerfeldt HH, Christensen OF, Mailund T, Homshoj H, Klein A, Wang J, Liu B, Hu S, Dong W, Li W, Wong GK, Yu J, Bendixen C, Fredholm M, Brunak S, Yang H, Bolund L (2005) Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing. BMC Genomics 6:70
-
(2005)
BMC Genomics
, vol.6
, pp. 70
-
-
Wernersson, R.1
Schierup, M.H.2
Jorgensen, F.G.3
Gorodkin, J.4
Panitz, F.5
Staerfeldt, H.H.6
Christensen, O.F.7
Mailund, T.8
Homshoj, H.9
Klein, A.10
Wang, J.11
Liu, B.12
Hu, S.13
Dong, W.14
Li, W.15
Wong, G.K.16
Yu, J.17
Bendixen, C.18
Fredholm, M.19
Brunak, S.20
Yang, H.21
Bolund, L.22
more..
-
41
-
-
24144434732
-
Hanging in the balance. KIR and their role in disease
-
Williams AP, Bateman AR, Khakoo SI (2005) Hanging in the balance. KIR and their role in disease. Mol Interv 5:226-240
-
(2005)
Mol Interv
, vol.5
, pp. 226-240
-
-
Williams, A.P.1
Bateman, A.R.2
Khakoo, S.I.3
-
42
-
-
0034712841
-
Plasticity in the organization and sequences of human KIR/ILT gene families
-
USA
-
Wilson MJ, Torkar M, Haude A, Milne S, Jones T, Sheer D, Beck S, Trowsdale J (2000) Plasticity in the organization and sequences of human KIR/ILT gene families. Proc Natl Acad Sci USA 97:4778-4783
-
(2000)
Proc Natl Acad Sci
, vol.97
, pp. 4778-4783
-
-
Wilson, M.J.1
Torkar, M.2
Haude, A.3
Milne, S.4
Jones, T.5
Sheer, D.6
Beck, S.7
Trowsdale, J.8
-
43
-
-
0035013595
-
Molecular cloning and characterization of pig immunoreceptor DAP10 and NKG2D
-
Yim D, Jie HB, Sotiriadis J, Kim YS, Kim KS, Rothschild MF, Lanier LL, Kim YB (2001) Molecular cloning and characterization of pig immunoreceptor DAP10 and NKG2D. Immunogenetics 53:243-249
-
(2001)
Immunogenetics
, vol.53
, pp. 243-249
-
-
Yim, D.1
Jie, H.B.2
Sotiriadis, J.3
Kim, Y.S.4
Kim, K.S.5
Rothschild, M.F.6
Lanier, L.L.7
Kim, Y.B.8
|