t-SINE or simple SINE? Can be both

Gene

Volumn 375, Issue 1-2, 2006, Pages 111-

  Borodulina, Olga R ^a   Kramerov, Dmitri A ^a  

^a ENGELHARDT INSTITUTE OF MOLECULAR BIOLOGY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; MONOMER; NUCLEOTIDE; TRANSFER RNA;

AT HOOK MOTIF; AT RICH SEQUENCE; DNA DETERMINATION; DNA SEQUENCE; GENE SEQUENCE; GENE STRUCTURE; GENETIC CONSERVATION; GENOME; GENOME ANALYSIS; LETTER; MAMMALIAN GENETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PSEUDOGENE; RETROPOSON; SEQUENCE ANALYSIS; SHORT INTERSPERSED REPEAT; STRUCTURAL GENOMICS; STRUCTURE ANALYSIS;

ANIMALS; ARMADILLOS; RNA, TRANSFER; SHORT INTERSPERSED NUCLEOTIDE ELEMENTS;

EID: 33744528834     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2006.02.004     Document Type: Letter

References (13)

1. Borodulina O.R., and Kramerov D.A. PCR-based approach to SINE isolation: simple and complex SINEs. Gene 349 (2005) 197-205
2. Churakov G., Smit A.F., Brosius J., and Schmitz J. A novel abundant family of retroposed elements (DAS-SINEs) in the nine-banded armadillo (Dasypus novemcinctus). Mol. Biol. Evol. 22 (2005) 886-893
3. Daniels G.R., and Deininger P.L. Repeat sequence families derived from mammalian tRNA genes. Nature 317 (1985) 819-822
4. Deininger P.L., and Daniels G.R. The recent evolution of mammalian repetitive DNA elements. Trends Genet. 2 (1986) 76-80
5. Kim J., Martignetti J.A., Shen M.R., Brosius J., and Deininger P. Rodent BC1 RNA gene as a master gene for ID element amplification. Proc. Natl. Acad. Sci. U. S. A. 91 (1994) 3607-3611
6. Kramerov D.A., and Vassetzky N.S. Structure and origin of a novel dimeric retroposon B1-dID. J. Mol. Evol. 52 (2001) 137-143
7. Kramerov D.A., and Vassetzky N.S. Short retroposons in eukaryotic genomes. Int. Rev. Cyt. 247 (2005) 165-221
8. Lander E.S., et al. Initial sequencing and analysis of the human genome. Nature 409 (2001) 860-921
9. Lin Z., Nomura O., Hayashi T., Wada Y., and Yasue H. Characterization of a SINE species from vicuna and its distribution in animal species including the family Camelidae. Mamm. Genome 12 (2001) 305-308
10. Piskurek O., Nikaido M., Boeadi, Baba M., and Okada N. Unique mammalian tRNA-derived repetitive elements in dermopterans: the t-SINE family and its retrotransposition through multiple sources. Mol. Biol. Evol. 20 (2003) 1659-1668
11. Sakamoto K., and Okada N. Rodent type 2 Alu family, rat identifier sequence, rabbit C family, and bovine or goat 73-bp repeat may have evolved from tRNA genes. J. Mol. Evol. 22 (1985) 134-140
12. Schmitz J., and Zischler H. A novel family of tRNA-derived SINEs in the colugo and two new retrotransposable markers separating dermopterans from primates. Mol. Phylogenet. Evol. 28 (2003) 341-349
13. Schmitz J., Churakov G., Zischler H., and Brosius J. A novel class of mammalian-specific tailless retropseudogenes. Genome Res. 14 (2004) 1911-1915