-
1
-
-
0037062433
-
Mammalian mitogenomic relationships and the root of the euthenan tree
-
Arnason, U., Adegoke, J.A., Bodin, K., Born, E.W., Esa, Y.B., Gullberg, A., Nilsson, M., Short, R.V., Xu, X., Janke, A., 2002. Mammalian mitogenomic relationships and the root of the euthenan tree. Proc. Natl. Acad. Sci. USA 99, 8151-8156.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 8151-8156
-
-
Arnason, U.1
Adegoke, J.A.2
Bodin, K.3
Born, E.W.4
Esa, Y.B.5
Gullberg, A.6
Nilsson, M.7
Short, R.V.8
Xu, X.9
Janke, A.10
-
2
-
-
0034807196
-
Short interspersed elements (SINEs) from insectivores. Two classes of mammalian SINEs distinguished by A-rich tail structure
-
Borodulina, O.K., Kramerov, D.A., 2001. Short interspersed elements (SINEs) from insectivores. Two classes of mammalian SINEs distinguished by A-rich tail structure. Mamm. Genome 12, 779-786.
-
(2001)
Mamm. Genome
, vol.12
, pp. 779-786
-
-
Borodulina, O.K.1
Kramerov, D.A.2
-
3
-
-
0032865868
-
RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements
-
Brosius, J., 1999. RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements. Gene 238, 115-134.
-
(1999)
Gene
, vol.238
, pp. 115-134
-
-
Brosius, J.1
-
4
-
-
0000307435
-
SINEs of the times' - Transposable elements as clade markers for their hosts
-
Cook, J.M., Tristem, M., 1997. 'SINEs of the times' - transposable elements as clade markers for their hosts. TREE 12, 295-297.
-
(1997)
TREE
, vol.12
, pp. 295-297
-
-
Cook, J.M.1
Tristem, M.2
-
5
-
-
0022422660
-
Nomenclature for incompletely specified bases in nucleic acid sequences: Recommendations 1984
-
Cornish-Bowden, A., 1985. Nomenclature for incompletely specified bases in nucleic acid sequences: recommendations 1984. Nucleic Acids Res. 13, 3021-3030.
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 3021-3030
-
-
Cornish-Bowden, A.1
-
6
-
-
0022388991
-
Repeat sequence families derived from mammalian tRNA genes
-
Daniels, G.R., Deininger, P.L., 1985. Repeat sequence families derived from mammalian tRNA genes. Nature 317, 819-822.
-
(1985)
Nature
, vol.317
, pp. 819-822
-
-
Daniels, G.R.1
Deininger, P.L.2
-
7
-
-
0035155740
-
Birth of a retroposon: The Twin SINE family from the vector mosquito Culex pipiens may have originated from a dimeric tRNA precursor
-
Feschotte, C., Fourrier, N., Desmons, I., Mouches, C., 2001. Birth of a retroposon: the Twin SINE family from the vector mosquito Culex pipiens may have originated from a dimeric tRNA precursor. Mol. Biol. Evol. 18, 74-84.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 74-84
-
-
Feschotte, C.1
Fourrier, N.2
Desmons, I.3
Mouches, C.4
-
8
-
-
0030045979
-
The age of Alu subfamilies
-
Kapitonov, V., Jurka, J., 1996. The age of Alu subfamilies. J. Mol. Evol. 42, 59-65.
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 59-65
-
-
Kapitonov, V.1
Jurka, J.2
-
9
-
-
0035933310
-
Birth of a gene: Locus of neuronal BC200 snmRNA in three prosimians and human BC200 pseudogenes as archives of change in the Anthropoidea lineage
-
Kuryshev, V.Yu., Skryabin, B.V., Kremerskothen, J., Jurka, J., Brosius, J., 2001. Birth of a gene: locus of neuronal BC200 snmRNA in three prosimians and human BC200 pseudogenes as archives of change in the Anthropoidea lineage. J. Mol. Biol. 309, 1049-1066.
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 1049-1066
-
-
Kuryshev, V.Yu.1
Skryabin, B.V.2
Kremerskothen, J.3
Jurka, J.4
Brosius, J.5
-
11
-
-
0035252569
-
Parallel adaptive radiations in two major clades of placental mammals
-
Madsen, O., Scally, M., Douady, C.J., Kao, D.J., DeBry, R.W., Adkins, R., Amrine, H.M., Stanhope, M.J., de Jong, W.W., Springer, M.S., 2001. Parallel adaptive radiations in two major clades of placental mammals. Nature 409, 610-614.
-
(2001)
Nature
, vol.409
, pp. 610-614
-
-
Madsen, O.1
Scally, M.2
Douady, C.J.3
Kao, D.J.4
Debry, R.W.5
Adkins, R.6
Amrine, H.M.7
Stanhope, M.J.8
De Jong, W.W.9
Springer, M.S.10
-
12
-
-
0027205382
-
Determination of the phylogenetic relationships among Pacific salmonids using short interspersed elements (SINEs) as temporal landmarks of evolution
-
Murata, S., Takasaki, N., Saitoh, M., Okada, N., 1993. Determination of the phylogenetic relationships among Pacific salmonids using short interspersed elements (SINEs) as temporal landmarks of evolution. Proc. Natl. Acad. Sci. USA 90, 6995-6999.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 6995-6999
-
-
Murata, S.1
Takasaki, N.2
Saitoh, M.3
Okada, N.4
-
13
-
-
0035252080
-
Molecular phylogenetics and the origins of placental mammals
-
Murphy, W.J., Eizirik, E., Johnson, W.E., Ping Zhang, Y., Ryder, O.A., O'Brien, S.J., 2001a. Molecular phylogenetics and the origins of placental mammals. Nature 409, 614-618.
-
(2001)
Nature
, vol.409
, pp. 614-618
-
-
Murphy, W.J.1
Eizirik, E.2
Johnson, W.E.3
Ping Zhang, Y.4
Ryder, O.A.5
O'Brien, S.J.6
-
14
-
-
0035861441
-
Resolution of the early placental mammal radiation using Bayesian phylogenetics
-
Murphy, W.J., Eizirik, E., O'Brien, S.J., Madsen, O., Scally, M., Douady, C.J., Teeling, E., Ryder, O.A., Stanhope, M.J., de Jong, W.W., Springer, M.S., 2001b. Resolution of the early placental mammal radiation using Bayesian phylogenetics. Science 294, 2348-2351.
-
(2001)
Science
, vol.294
, pp. 2348-2351
-
-
Murphy, W.J.1
Eizirik, E.2
O'Brien, S.J.3
Madsen, O.4
Scally, M.5
Douady, C.J.6
Teeling, E.7
Ryder, O.A.8
Stanhope, M.J.9
De Jong, W.W.10
Springer, M.S.11
-
15
-
-
0033621101
-
Phylogenetic relationships among cetartiodactyls based on insertions of short and long interspersed elements: Hippopotamuses are the closest extant relatives of whales
-
Nikaido, M., Rooney, A.P., Okada, N., 1999. Phylogenetic relationships among cetartiodactyls based on insertions of short and long interspersed elements: hippopotamuses are the closest extant relatives of whales. Proc. Natl. Acad. Sci. USA 96, 10261-10266.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 10261-10266
-
-
Nikaido, M.1
Rooney, A.P.2
Okada, N.3
-
16
-
-
0036854336
-
Characterization of novel Alu- and tRNA-related SINEs from the tree shrew and evolutionary implications of their origins
-
Nishihara, H., Terai, Y., Okada, N., 2002. Characterization of novel Alu-and tRNA-related SINEs from the tree shrew and evolutionary implications of their origins. Mol. Biol. Evol. 19, 1964-1972.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1964-1972
-
-
Nishihara, H.1
Terai, Y.2
Okada, N.3
-
17
-
-
0001414578
-
SINEs: Short interspersed repeated elements of the eukaryotic genome
-
Okada, N., 1991. SINEs: short interspersed repeated elements of the eukaryotic genome. Trends Ecol. Evol. 6, 358-361.
-
(1991)
Trends Ecol. Evol.
, vol.6
, pp. 358-361
-
-
Okada, N.1
-
18
-
-
0026749958
-
Origin of the Alu family: A family of Alu-like monomers gave birth to the left and the right arms of the Alu elements
-
Quentin, Y., 1992. Origin of the Alu family: a family of Alu-like monomers gave birth to the left and the right arms of the Alu elements. Nucleic Acids Res. 20, 3397-3401.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 3397-3401
-
-
Quentin, Y.1
-
19
-
-
0022315823
-
Rodent type 2 Alu family, rat identifier sequence, rabbit C family, and bovine or goat 73 bp repeat may be evolved from tRNA gene
-
Sakamoto, K., Okada, N., 1985. Rodent type 2 Alu family, rat identifier sequence, rabbit C family, and bovine or goat 73 bp repeat may be evolved from tRNA gene. J. Mol. Evol. 2, 134-140.
-
(1985)
J. Mol. Evol.
, vol.2
, pp. 134-140
-
-
Sakamoto, K.1
Okada, N.2
-
20
-
-
0003903343
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor
-
Sambrook, J., Fritsch, E.F., Maniatis, T., 1989. Molecular Cloning: A Laboratory Manual, second ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
-
(1989)
Molecular Cloning: A Laboratory Manual, Second Ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
21
-
-
0019167413
-
Dimeric tRNA precursors in yeast
-
Schmidt, O., Mao, J., Ogden, R., Beckmann, J., Sakano, H., Abelson, J., Trotta, C.R., Li, H., Soll, D., 1980. Dimeric tRNA precursors in yeast. Nature 287, 750-752.
-
(1980)
Nature
, vol.287
, pp. 750-752
-
-
Schmidt, O.1
Mao, J.2
Ogden, R.3
Beckmann, J.4
Sakano, H.5
Abelson, J.6
Trotta, C.R.7
Li, H.8
Soll, D.9
-
22
-
-
0035108258
-
SINE insertions in cladistic analyses and the phylogenetic affiliations of Tarsius bancanus to other primates
-
Schmitz, J., Ohme, M., Zischler, H., 2001. SINE insertions in cladistic analyses and the phylogenetic affiliations of Tarsius bancanus to other primates. Genetics 157, 777-784.
-
(2001)
Genetics
, vol.157
, pp. 777-784
-
-
Schmitz, J.1
Ohme, M.2
Zischler, H.3
-
23
-
-
0036220666
-
The complete mitochondrial sequence of Tarsius bancanus: Evidence for an extensive nucleotide compositional plasticity of primate mitochondrial DNA
-
Schmitz, J., Ohme, M., Zischler, H., 2002a. The complete mitochondrial sequence of Tarsius bancanus: evidence for an extensive nucleotide compositional plasticity of primate mitochondrial DNA. Mol. Biol. Evol. 19, 544-553.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 544-553
-
-
Schmitz, J.1
Ohme, M.2
Zischler, H.3
-
24
-
-
0036898942
-
The colugo (Cynocephalus variegatus, Dermoptera): The primates gliding sister?
-
Schmitz, J., Ohme, M., Suryobroto, B., Zischler, H., 2002b. The colugo (Cynocephalus variegatus, Dermoptera): the primates gliding sister? Mol. Biol. Evol. 19, 2308-2312.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 2308-2312
-
-
Schmitz, J.1
Ohme, M.2
Suryobroto, B.3
Zischler, H.4
-
25
-
-
25444465087
-
Molecular cladistic markers and the infraordinal phylogenetic relationships of primates
-
Ross, C.F., Kay, R.F. (Eds.), Kluwer Academic/Plenum Publishers, New York
-
Schmitz, J., Zischler, H., 2003. Molecular cladistic markers and the infraordinal phylogenetic relationships of primates. In: Ross, C.F., Kay, R.F. (Eds.), Anthropoid Origins: New Visions. Kluwer Academic/Plenum Publishers, New York.
-
(2003)
Anthropoid Origins: New Visions
-
-
Schmitz, J.1
Zischler, H.2
-
26
-
-
0033964296
-
SINE insertions: Powerful tools for molecular systematics
-
Shedlock, A.M., Okada, N., 2000. SINE insertions: powerful tools for molecular systematics. BioEssays 22, 148-160.
-
(2000)
BioEssays
, vol.22
, pp. 148-160
-
-
Shedlock, A.M.1
Okada, N.2
-
27
-
-
0034351398
-
SINE evolution, missing data, and the origin of whales
-
Shedlock, A.M., Milinkovitch, M.C., Okada, N., 2000. SINE evolution, missing data, and the origin of whales. Syst. Biol. 49, 808-817.
-
(2000)
Syst. Biol.
, vol.49
, pp. 808-817
-
-
Shedlock, A.M.1
Milinkovitch, M.C.2
Okada, N.3
-
28
-
-
0028920059
-
Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences
-
Smit, A.F.A., Toth, G., Riggs, A.D., Jurka, J., 1995. Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences. J. Mol. Biol. 246, 401-417.
-
(1995)
J. Mol. Biol.
, vol.246
, pp. 401-417
-
-
Smit, A.F.A.1
Toth, G.2
Riggs, A.D.3
Jurka, J.4
-
30
-
-
0031804156
-
Compilation of tRNA sequences and sequences of tRNA genes
-
Sprinzl, M., Horn, C., Brown, M., Ioudovitch, A., Steinberg, S., 1998. Compilation of tRNA sequences and sequences of tRNA genes. Nucleic Acids Res. 26, 148-153.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 148-153
-
-
Sprinzl, M.1
Horn, C.2
Brown, M.3
Ioudovitch, A.4
Steinberg, S.5
-
31
-
-
0029836454
-
Quartet puzzling: A quartet maximum-likelihood method for reconstructing tree topologies
-
Strimmer, K., von Haeseler, A., 1996. Quartet puzzling: a quartet maximum-likelihood method for reconstructing tree topologies. Mol. Biol. Evol. 13, 964-969.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 964-969
-
-
Strimmer, K.1
Von Haeseler, A.2
-
33
-
-
0037129204
-
Using the fossil record to estimate the age of the last common ancestor of extant primates
-
Tavare, S., Marshall, R., Will, O., Soligo, C., Martin, R.D., 2002. Using the fossil record to estimate the age of the last common ancestor of extant primates. Nature 416, 726-729.
-
(2002)
Nature
, vol.416
, pp. 726-729
-
-
Tavare, S.1
Marshall, R.2
Will, O.3
Soligo, C.4
Martin, R.D.5
-
34
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., Higgins, D.G., 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25, 4876-4882.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
35
-
-
0035752767
-
A phylogenetic foundation for comparative mammalian genomics
-
Waddell, P.J., Kishino, H., Ota, R., 2001. A phylogenetic foundation for comparative mammalian genomics. Genome Informatics 12, 141-154.
-
(2001)
Genome Informatics
, vol.12
, pp. 141-154
-
-
Waddell, P.J.1
Kishino, H.2
Ota, R.3
-
36
-
-
0022555861
-
Nonviral retroposons: Genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information
-
Weiner, A.M., Deininger, P.L., Efstratiadis, A., 1986. Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information. Annu. Rev. Biochem. 55, 631-661.
-
(1986)
Annu. Rev. Biochem.
, vol.55
, pp. 631-661
-
-
Weiner, A.M.1
Deininger, P.L.2
Efstratiadis, A.3
|