Comparative integromics on Eph family

International Journal of Oncology

Volumn 28, Issue 5, 2006, Pages 1243-1247

  Katoh, Masuko ^a   Katoh, Masaru ^b  

^a M&M Medical BioInformatics   (Japan)

^b NATIONAL CANCER CENTER RESEARCH INSTITUTE   (Japan)

Author keywords

Bioinformatics; Comparative genomics; Comparative proteomics; EFN; EPH; Integrome network; Systems medicine; WNT

Indexed keywords

EPHRIN RECEPTOR; LIGAND;

ANIMAL; ARTICLE; CATTLE; GENETICS; GENOME; HUMAN; INTEGRON; MOLECULAR CLONING; MOLECULAR GENETICS; MULTIGENE FAMILY; NUCLEOTIDE SEQUENCE; PAN TROGLODYTES; PROMOTER REGION; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY;

ANIMALS; BASE SEQUENCE; CATTLE; CLONING, MOLECULAR; CONSERVED SEQUENCE; GENOME, HUMAN; HUMANS; INTEGRONS; LIGANDS; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; PAN TROGLODYTES; PROMOTER REGIONS (GENETICS); RECEPTORS, EPH FAMILY; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, NUCLEIC ACID;

EID: 33646840859     PISSN: 10196439     EISSN: 17912423     Source Type: Journal    
DOI: 10.3892/ijo.28.5.1243     Document Type: Article

References (39)

1. Flanagan JG and Vanderhaeghen P: The ephrins and Eph receptors in neural development. Annu Rev Neurosci 21: 309-345, 1998.
2. Holder N and Klein R: Eph receptors and ephrins: effectors of morphogenesis. Development 126: 2033-2044, 1999.
3. Wilkinson DG: Multiple roles of Eph receptors and ephrinin neural development. Nat Rev Neurosci 2: 155-164, 2001.
4. Mancia F and Shapiro L: ADAM and Eph: how Ephrin-signaling cells become detached. Cell 123: 185-187, 2005.
5. Battle E, Henderson JT, Beghtel H, et al: β-catenin and TCF mediate cell positioning in the intestinal epithelium by controlling the expression of EphB/EphrinB. Cell 111: 251-263, 2002.
6. Katoh M: WNT and FGF gene clusters. Int J Oncol 21: 1269-1273, 2002.
7. Katoh M: Regulation of WNT signaling molecules by retinoic acid during neuronal differentiation in NT2 cells: threshold model of WNT action. Int J Mol Med 10: 683-687, 2002.
8. Heller RS, Klein T, Ling Z, Heimberg H, Katoh M, Madsen OD and Serup P: Expression of WNT, Frizzled, sFRP, and DKK genes in adult human pancreas. Gene Expr 11: 141-147, 2003.
9. Katoh M: WNT2 and human gastrointestinal cancer. Int J Mol Med 12: 811-816, 2003.
10. Katoh M and Katoh M: Identification and characterization of human BCL9L gene and mouse Bcl9l gene in silico. Int J Mol Med 12: 643-649, 2003.
11. Garciadiego-Cazares D, Rosales C, Katoh M and Chimal-Monroy J: Coordination of chondrocyte differentiation and joint formation by α5β1 integrin in the developing appendicular skeleton. Development 131: 4735-4742, 2004.
12. Katoh M and Katoh M: Comparative genomics on WNT8A and WNT8B genes. Int J Oncol 26: 1129-1133, 2005.
13. Katoh M: Molecular evolution of WNT2B orthologs. Int J Oncol 26: 1135-1139, 2005.
14. Katoh M: Comparative genomics on WNT3-WNT9B gene cluster. Int J Mol Med 15: 743-747, 2005.
15. Swain RK, Katoh M, Medina A and Steinbeisser H: Xenopus frizzled-4S, a splicing variant of Xfz4, is a context-dependent activator and inhibitor of Wnt/β-catenin signaling. Cell Commun Signal 3: 12, 2005.
16. Katoh M: Epithelial-mesenchymal transition in gastric cancer. Int J Oncol 27: 1677-1683, 2005.
17. Katoh M: WNT2B: comparative integromics and clinical application. Int J Mol Med 16: 1103-1108, 2005.
18. Katoh Y and Katoh M: Comparative genomics on DKK1 orthologs. Int J Oncol 27: 275-279, 2005.
19. Katoh Y and Katoh M: Comparative genomics on DKK2 and DKK4 orthologs. Int J Mol Med 16: 477-481, 2005.
20. Katoh M and Katoh M: Comparative genomics on FGF20 orthologs. Oncol Rep 14: 287-290, 2005.
21. Katoh M and Katoh M: Comparative genomics on FGF8, FGF17, and FGF18 orthologs. Int J Mol Med 16: 493-496, 2005.
22. Katoh Y and Katoh M: Comparative genomics on FGF16 orthologs. Int J Mol Med 16: 959-963, 2005.
23. Katoh M: Paradigm shift in gene-finding method: from benchtop approach to desk-top approach. Int J Mol Med 10: 677-682, 2002.
24. Katoh M and Katoh M: Evolutionary conservation of CCND1-ORAOV1-FGF19-FGF4 locus from zebrafish to human. Int J Mol Med 12: 45-50, 2003.
25. Katoh M and Katoh M: CLDN23 gene, frequently down-regulated in intestinal-type gastric cancer, is a novel member of CLAUDIN gene family. Int J Mol Med 11: 683-689, 2003.
26. Katoh M and Katoh M: Identification and characterization of human MPP7 gene and mouse Mpp7 gene in silico. Int J Mol Med 13: 333-338, 2004.
27. Katoh M and Katoh M: Identification and characterization of Crumbs homolog 2 gene at human chromosome 9q33.3. Int J Oncol 24: 743-749, 2004.
28. Katoh M and Katoh M: Identification and characterization of human HES2, HES3, and HES5 genes in silico. Int J Oncol 25: 529-534, 2004.
29. Katoh Y and Katoh M: Comparative genomics on HHIP family orthologs. Int J Mol Med 17: 391-395, 2006.
30. Katoh Y and Katoh M: FGF signaling inhibitor, SPRY4, is evolutionarily conserved target of WNT signaling pathway in progenitor cells. Int J Mol Med 17: 529-532, 2006.
31. Katoh M and Katoh M: Identification and characterization of human HESL, rat Hesl and rainbow trout hesl genes in silico. Int J Mol Med 14: 747-751, 2004.
32. Katoh M and Katoh M: Comparative genomics on WNT5A and WNT5B genes. Int J Mol Med 15: 749-753, 2005.
33. Katoh Y and Katoh M: Comparative genomics on WNT11 gene. Int J Mol Med 15: 879-883, 2005.
34. Katoh Y and Katoh M: Comparative genomics on VANGL1 and VANGL2 genes. Int J Oncol 26: 1435-1440, 2005.
35. Katoh Y and Katoh M: Comparative genomics on SFRP1 orthologs. Int J Oncol 27: 861-865, 2005.
36. Katoh Y and Katoh M: WNT antagonist, SFRP1, is Hedgehog signaling target. Int J Mol Med 17: 171-175, 2006.
37. Morin PJ, Sparks AB, Korinek V, et al: Activation of β-catenin-Tcf signaling in colon cancer by mutations in β-catenin or APC. Science 275: 1787-1890, 1997.
38. Battle E, Bacani J, Begthel H, et al: EphB receptor activity suppresses colorectal cancer progression. Nature 435: 1126-1130, 2005.
39. Srikantan V, Sesterhenn IA, Davis L, et al: Allelic loss on chromosome 6q in primary prostate cancer. Int J Cancer 84: 331-335, 1999.