-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0001045812
-
Inorganic pyrophosphate and inorganic pyrophosphatases
-
Edited by L. Ernster. Amsterdam: Elsevier
-
Baltscheffsky, M. & Baltscheffsky, H. (1993). Inorganic pyrophosphate and inorganic pyrophosphatases. In Molecular Mechanisms in Bioenergetics, pp. 331-348. Edited by L. Ernster. Amsterdam: Elsevier.
-
(1993)
Molecular Mechanisms in Bioenergetics
, pp. 331-348
-
-
Baltscheffsky, M.1
Baltscheffsky, H.2
-
4
-
-
18744423090
-
Identification and analysis of proton-translocating pyrophosphatases in the methanogenic archaeon Methansarcina mazei
-
Bäumer, S., Lentes, S., Gottschalk, G. & Deppenmeier, U. (2002). Identification and analysis of proton-translocating pyrophosphatases in the methanogenic archaeon Methansarcina mazei. Archaea 1, 1-7.
-
(2002)
Archaea
, vol.1
, pp. 1-7
-
-
Bäumer, S.1
Lentes, S.2
Gottschalk, G.3
Deppenmeier, U.4
-
5
-
-
0037151064
-
+ -pyrophosphatase of Rhodospirillum rubrum. High yield expression in Escherichia coli and identification of the Cys residues responsible for inactivation by mersalyl
-
+ -pyrophosphatase of Rhodospirillum rubrum. High yield expression in Escherichia coli and identification of the Cys residues responsible for inactivation by mersalyl. J Biol Chem 277, 22209-22214.
-
(2002)
J Biol Chem
, vol.277
, pp. 22209-22214
-
-
Belogurov, G.A.1
Turkina, M.V.2
Penttinen, A.3
Huopalahti, S.4
Baykov, A.A.5
Lahti, R.6
-
6
-
-
0034193445
-
Sodium transport in plant cells
-
Blumwald, E, Aharon, G. S. & Apse, M. P. (2000). Sodium transport in plant cells. Biochim Biophys Acta 1465, 140-151.
-
(2000)
Biochim Biophys Acta
, vol.1465
, pp. 140-151
-
-
Blumwald, E.1
Aharon, G.S.2
Apse, M.P.3
-
7
-
-
0035148851
-
Size comparisons among integral membrane transport protein homologues in bacteria, archaea, and eucarya
-
Chung, Y. J., Krueger, C., Metzgar, D. & Saier, M. H., Jr (2001). Size comparisons among integral membrane transport protein homologues in bacteria, archaea, and eucarya. J Bacteriol 183, 1012-1021.
-
(2001)
J Bacteriol
, vol.183
, pp. 1012-1021
-
-
Chung, Y.J.1
Krueger, C.2
Metzgar, D.3
Saier Jr., M.H.4
-
8
-
-
0021760092
-
A comprehensive set of sequence analysis programs for the VAX
-
Devereux, J., Haeberli, P. & Smithies, O. (1984). A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12, 387-395.
-
(1984)
Nucleic Acids Res
, vol.12
, pp. 387-395
-
-
Devereux, J.1
Haeberli, P.2
Smithies, O.3
-
9
-
-
0035209342
-
+ pyrophosphatases: From the evolutionary backwaters into the mainstream
-
+ pyrophosphatases: from the evolutionary backwaters into the mainstream. Trends Plant Sci 6, 206-211.
-
(2001)
Trends Plant Sci
, vol.6
, pp. 206-211
-
-
Drozdowicz, Y.M.1
Rea, P.A.2
-
10
-
-
0032725586
-
A thermostable vacuolar-type membrane pyrophosphatase from the archaeon Pyrobaculum aerophilum: Implication for the origins of pyrophosphate-energized pumps
-
Drozdowicz, Y. M., Lu, Y.-P., Patel, V., Fitz-Gibbon, S., Miller, J. H. & Rea, P. A. (1999). A thermostable vacuolar-type membrane pyrophosphatase from the archaeon Pyrobaculum aerophilum: implication for the origins of pyrophosphate-energized pumps. FEBS Lett 460, 505-512.
-
(1999)
FEBS Lett
, vol.460
, pp. 505-512
-
-
Drozdowicz, Y.M.1
Lu, Y.-P.2
Patel, V.3
Fitz-Gibbon, S.4
Miller, J.H.5
Rea, P.A.6
-
12
-
-
0037428380
-
+ -translocating pyrophosphatase from Toxoplasma gondii. The dynamics of its subcellular localization and the cellular effects of a diphosphonate inhibitor
-
+ -translocating pyrophosphatase from Toxoplasma gondii. The dynamics of its subcellular localization and the cellular effects of a diphosphonate inhibitor. J Biol Chem 278, 1075-1085.
-
(2003)
J Biol Chem
, vol.278
, pp. 1075-1085
-
-
Drozdowicz, Y.M.1
Shaw, M.2
Nishi, M.3
Striepen, B.4
Liwinski, H.A.5
Roos, D.S.6
Rea, P.A.7
-
15
-
-
0028893719
-
+ -pyrophosphatase. Necessity of Cys634 for inhibition by maleimides but not catalysis
-
+ -pyrophosphatase. Necessity of Cys634 for inhibition by maleimides but not catalysis. J Biol Chem 270, 2630-2635.
-
(1995)
J Biol Chem
, vol.270
, pp. 2630-2635
-
-
Kim, E.J.1
Zhen, R.G.2
Rea, P.A.3
-
16
-
-
3843077423
-
Differential regulation of soluble and membrane-bound inorganic pyrophosphatases in the photosynthetic bacterium Rhodospirillum rubrum provides insights into pyrophosphate-based stress bioenergetics
-
López-Marqués, R. L., Pérez-Castiñeira, J. R., Losada, M. & Serrano, A. (2004). Differential regulation of soluble and membrane-bound inorganic pyrophosphatases in the photosynthetic bacterium Rhodospirillum rubrum provides insights into pyrophosphate-based stress bioenergetics. J Bacteriol 186, 5418-5426.
-
(2004)
J Bacteriol
, vol.186
, pp. 5418-5426
-
-
López-Marqués, R.L.1
Pérez-Castiñeira, J.R.2
Losada, M.3
Serrano, A.4
-
17
-
-
4544273344
-
+ -pyrophosphatase of Streptomyces coelicolor determined by cysteine-scanning mutagenesis
-
+ -pyrophosphatase of Streptomyces coelicolor determined by cysteine-scanning mutagenesis. J Biol Chem 279, 35106-35112.
-
(2004)
J Biol Chem
, vol.279
, pp. 35106-35112
-
-
Mimura, H.1
Nakanishi, Y.2
Hirono, M.3
Maeshima, M.4
-
18
-
-
0142025300
-
Vacuolar proton pumps in malaria parasite cells
-
Moriyama, Y., Hayashi, M., Yatsushiro, S. & Yamamoto, A. (2003). Vacuolar proton pumps in malaria parasite cells. J Bioenerg Biomembr 35, 367-375.
-
(2003)
J Bioenerg Biomembr
, vol.35
, pp. 367-375
-
-
Moriyama, Y.1
Hayashi, M.2
Yatsushiro, S.3
Yamamoto, A.4
-
19
-
-
0742288371
-
A new model for proton pumping in animal cells: The role of pyrophosphate
-
Motta, L. S., da Silva, W. S., Oliveira, D. M., de Souza, W. & Machado, E. A. (2004). A new model for proton pumping in animal cells: the role of pyrophosphate. Insect Biochem Mol Biol 34, 19-27.
-
(2004)
Insect Biochem Mol Biol
, vol.34
, pp. 19-27
-
-
Motta, L.S.1
da Silva, W.S.2
Oliveira, D.M.3
de Souza, W.4
Machado, E.A.5
-
20
-
-
0034624221
-
+ -translocating pyrophosphatase by phosphate starvation of Brassica napus (rapeseed) suspension cell cultures
-
+ -translocating pyrophosphatase by phosphate starvation of Brassica napus (rapeseed) suspension cell cultures. FEBS Lett 486, 155-158.
-
(2000)
FEBS Lett
, vol.486
, pp. 155-158
-
-
Palma, D.A.1
Blumwald, E.2
Plaxton, W.C.3
-
21
-
-
0035824644
-
The polyphosphate bodies of Chlamydomonas reinhardtii possess a proton-pumping pyrophosphatase and are similar to acidocalcisomes
-
Ruiz, F. A., Marchesini, N., Seufferheld, M., Govindjee & Docampo, R. (2001). The polyphosphate bodies of Chlamydomonas reinhardtii possess a proton-pumping pyrophosphatase and are similar to acidocalcisomes. J Biol Chem 276, 46196-46203.
-
(2001)
J Biol Chem
, vol.276
, pp. 46196-46203
-
-
Ruiz, F.A.1
Marchesini, N.2
Seufferheld, M.3
Govindjee4
Docampo, R.5
-
22
-
-
0028345374
-
Computer-aided analyses of transport protein sequences: Gleaning evidence concerning function, structure, biogenesis, and evolution
-
Saier, M. H., Jr (1994). Computer-aided analyses of transport protein sequences: gleaning evidence concerning function, structure, biogenesis, and evolution. Microbiol Rev 58, 71-93.
-
(1994)
Microbiol Rev
, vol.58
, pp. 71-93
-
-
Saier Jr., M.H.1
-
23
-
-
0037783318
-
Tracing pathways of transport protein evolution
-
Saier, M. H., Jr (2003a). Tracing pathways of transport protein evolution. Mol Microbiol 48, 1145-1156.
-
(2003)
Mol Microbiol
, vol.48
, pp. 1145-1156
-
-
Saier Jr., M.H.1
-
24
-
-
0038083938
-
Answering fundamental questions in biology with bioinformatics
-
Saier, M. H., Jr (2003b). Answering fundamental questions in biology with bioinformatics. ASM News 69, 175-181.
-
(2003)
ASM News
, vol.69
, pp. 175-181
-
-
Saier Jr., M.H.1
-
25
-
-
0026512325
-
Molecular cloning and sequence of cDNA encoding the pyrophosphate-energized vacuolar membrane proton pump of Arabidopsis thaliana
-
Sarafian, V., Kim, Y., Poole, R. J. & Rea, P. A. (1992a). Molecular cloning and sequence of cDNA encoding the pyrophosphate-energized vacuolar membrane proton pump of Arabidopsis thaliana. Proc Natl Acad Sci U S A 89, 1775-1779.
-
(1992)
Proc Natl Acad Sci U S A
, vol.89
, pp. 1775-1779
-
-
Sarafian, V.1
Kim, Y.2
Poole, R.J.3
Rea, P.A.4
-
27
-
-
0042154176
-
Identification of organelles in bacteria similar to acidocalcisomes of unicellular eukaryotes
-
Seufferheld, M., Vieira, M. C., Ruiz, F. A., Rodrigues, C. O., Moreno, S. N. & Docampo, R. (2003). Identification of organelles in bacteria similar to acidocalcisomes of unicellular eukaryotes. J Biol Chem 278, 29971-29978.
-
(2003)
J Biol Chem
, vol.278
, pp. 29971-29978
-
-
Seufferheld, M.1
Vieira, M.C.2
Ruiz, F.A.3
Rodrigues, C.O.4
Moreno, S.N.5
Docampo, R.6
-
28
-
-
0031574072
-
The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
29
-
-
0034874253
-
A web-based program (WHAT) for the simultaneous prediction of hydropathy, amphipathicity, secondary structure and transmembrane topology for a single protein sequence
-
Zhai, Y. & Saier, M. H., Jr (2001a). A web-based program (WHAT) for the simultaneous prediction of hydropathy, amphipathicity, secondary structure and transmembrane topology for a single protein sequence. J Mol Microbiol Biotechnol 3, 501-502.
-
(2001)
J Mol Microbiol Biotechnol
, vol.3
, pp. 501-502
-
-
Zhai, Y.1
Saier Jr., M.H.2
-
30
-
-
0035087954
-
A web-based program for the prediction of average hydropathy, average amphipathicity and average similarity of multiply aligned homologous proteins
-
Zhai, Y. & Saier, M. H., Jr (2001b). A web-based program for the prediction of average hydropathy, average amphipathicity and average similarity of multiply aligned homologous proteins. J Mol Microbiol Biotechnol 3, 285-286.
-
(2001)
J Mol Microbiol Biotechnol
, vol.3
, pp. 285-286
-
-
Zhai, Y.1
Saier Jr., M.H.2
-
31
-
-
0035988281
-
A simple sensitive program for detecting internal repeats in sets of multiply aligned homologous proteins
-
Zhai, Y. & Saier, M. H., Jr (2002). A simple sensitive program for detecting internal repeats in sets of multiply aligned homologous proteins. J Mol Microbiol Biotechnol 4, 29-31.
-
(2002)
J Mol Microbiol Biotechnol
, vol.4
, pp. 29-31
-
-
Zhai, Y.1
Saier Jr., M.H.2
-
33
-
-
0030868387
-
+ -pyrophosphatase by N,N′ -dicyclohexylcarbodiimide
-
+ -pyrophosphatase by N,N′ -dicyclohexylcarbodiimide. J Biol Chem 272, 22340-22348.
-
(1997)
J Biol Chem
, vol.272
, pp. 22340-22348
-
-
Zhen, R.-G.1
Kim, E.J.2
Rea, P.A.3
-
34
-
-
77956734939
-
The molecular and biochemical basis of pyrophosphate-energized proton translocation at the vacuolar membrane
-
Zhen, R.-G., Kim, E. J. & Rea, P. A. (1997b). The molecular and biochemical basis of pyrophosphate-energized proton translocation at the vacuolar membrane. Adv Bot Res 25, 297-337.
-
(1997)
Adv Bot Res
, vol.25
, pp. 297-337
-
-
Zhen, R.-G.1
Kim, E.J.2
Rea, P.A.3
|