A web-based program (WHAT) for the simultaneous prediction of hydropathy, amphipathicity, secondary structure and transmembrane topology for a single protein sequence

Journal of Molecular Microbiology and Biotechnology

Volumn 3, Issue 4, 2001, Pages 501-502

  Zhai, Y ^a   Saier M H , Jr ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; PROTEIN;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; COMPUTER INTERFACE; COMPUTER PROGRAM; HYDROPHILICITY; HYDROPHOBICITY; INTERNET; MEMBRANE STRUCTURE; PREDICTION; PROTEIN ANALYSIS; STRUCTURE ANALYSIS;

INTERNET; PROTEIN STRUCTURE, SECONDARY; PROTEINS; SOFTWARE;

EID: 0034874253     PISSN: 14641801     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (10)

1. Jpred: A consensus secondary structure prediction server
2. The helical hydrophobic moment: A measure of the amphiphilicity of a helix
3. Progressive alignment and phylogenetic tree construction of protein sequences
4. A model recognition approach to the prediction of all-helical membrane protein structure and topology
5. Flexible programs for the prediction of average amphipathicity of multiply aligned homologous proteins: Application to integral membrane transport proteins
6. Hydrophobic organization of membrane proteins
7. Mitochondrial presequences
8. Signals guiding proteins to their correct locations in mitochondria (17th Sir Hans Krebs lecture)
9. The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
10. A web-based program for the prediction of average hydropathy, average amphipathicity and average similarity of multiply aligned homologous proteins