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Volumn 63, Issue 4, 2006, Pages 1092-1096

Crystal structures of two putative phosphoheptose isomerases

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; DIMER; HEPTOSE; ISOMERASE; MONOMER; PHOSPHOHEPTOSE ISOMERASE; SERINE; UNCLASSIFIED DRUG;

EID: 33646781201     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.20908     Document Type: Article
Times cited : (13)

References (25)
  • 2
    • 0030627901 scopus 로고    scopus 로고
    • Protein structures sustain evolutionary drift
    • Rost B. Protein structures sustain evolutionary drift. Fold Des 1997;2:S19-24.
    • (1997) Fold des , vol.2
    • Rost, B.1
  • 4
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray diffraction data collected in oscillation mode
    • Otwinowski Z, Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol 1997;276:307-326.
    • (1997) Methods Enzymol , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 5
    • 0033081959 scopus 로고    scopus 로고
    • Discrimination of solvent from protein regions in native Fouriers as a means of evaluating heavy-atom solutions in the MIR and MAD methods
    • Terwilliger TC, Berendzen J. Discrimination of solvent from protein regions in native Fouriers as a means of evaluating heavy-atom solutions in the MIR and MAD methods. Acta Crystallogr 1999;D55:501-505.
    • (1999) Acta Crystallogr , vol.D55 , pp. 501-505
    • Terwilliger, T.C.1    Berendzen, J.2
  • 6
    • 0001006942 scopus 로고    scopus 로고
    • Maximum-likelihood heavy atom parameter refinement in the MIR and MAD methods
    • De La Portelle E, Bricogne G. Maximum-likelihood heavy atom parameter refinement in the MIR and MAD methods. Methods Enzymol 1997:276:472-493.
    • (1997) Methods Enzymol , vol.276 , pp. 472-493
    • De La Portelle, E.1    Bricogne, G.2
  • 7
    • 0030038464 scopus 로고    scopus 로고
    • Methods used in the structure determination of bovine mitochondrial F1 ATPase
    • Abrahams JP, Leslie AG. Methods used in the structure determination of bovine mitochondrial F1 ATPase. Acta Crystallogr 1996;D52:30-42.
    • (1996) Acta Crystallogr , vol.D52 , pp. 30-42
    • Abrahams, J.P.1    Leslie, A.G.2
  • 8
    • 0022325950 scopus 로고
    • Resolution of phase ambiguity
    • Wang BC. Resolution of phase ambiguity. Methods Enzymol 1985;115:90-112.
    • (1985) Methods Enzymol , vol.115 , pp. 90-112
    • Wang, B.C.1
  • 9
    • 0033896691 scopus 로고    scopus 로고
    • Maximum likelihood density modification
    • Terwilliger TC. Maximum likelihood density modification. Acta Crystallogr 2000;D56:965-972.
    • (2000) Acta Crystallogr , vol.D56 , pp. 965-972
    • Terwilliger, T.C.1
  • 10
    • 0032964481 scopus 로고    scopus 로고
    • Automated protein model building combined with iterative structure refinement
    • Perrakis A, Morris R, Lamzin VS. Automated protein model building combined with iterative structure refinement. Nat Struct Biol 1999;6:458-463.
    • (1999) Nat Struct Biol , vol.6 , pp. 458-463
    • Perrakis, A.1    Morris, R.2    Lamzin, V.S.3
  • 11
    • 84889120137 scopus 로고
    • Improved methods in building protein models in electron density map and the location of errors in these models
    • Jones TA, Zou J, Cowtan S, Kjeldgaard M. Improved methods in building protein models in electron density map and the location of errors in these models. Acta Crystallogr 1991;A47:110-119.
    • (1991) Acta Crystallogr , vol.A47 , pp. 110-119
    • Jones, T.A.1    Zou, J.2    Cowtan, S.3    Kjeldgaard, M.4
  • 13
    • 0000243829 scopus 로고
    • PRO-CHECK: A program to check the stereochemical quality for assessing the accuracy of protein structures
    • Laskowski RA, MacArthur MW, Moss DS, Thornton JM. PRO-CHECK: a program to check the stereochemical quality for assessing the accuracy of protein structures. J Appl Crystallogr 1993;26:283-291.
    • (1993) J Appl Crystallogr , vol.26 , pp. 283-291
    • Laskowski, R.A.1    MacArthur, M.W.2    Moss, D.S.3    Thornton, J.M.4
  • 15
    • 0028871926 scopus 로고
    • A network tool for protein structure comparison
    • Holm L, Sander C. A network tool for protein structure comparison. Trends Biochem Sci 1995;20:478-480.
    • (1995) Trends Biochem Sci , vol.20 , pp. 478-480
    • Holm, L.1    Sander, C.2
  • 16
    • 0036179451 scopus 로고    scopus 로고
    • Crystal structure of Mj1247 protein from M. Jannaschii at 2.0 A resolution infers a molecular function of 3-hexulose-6-phosphate isomerase
    • Martinez-Cruz LA, Dreyer MK, Boisvert DC, Yokota H, Martinez-Chantar ML, Kim R, Kim SH. Crystal structure of Mj1247 protein from M. Jannaschii at 2.0 A resolution infers a molecular function of 3-hexulose-6-phosphate isomerase. Structure 2002;10:195-204.
    • (2002) Structure , vol.10 , pp. 195-204
    • Martinez-Cruz, L.A.1    Dreyer, M.K.2    Boisvert, D.C.3    Yokota, H.4    Martinez-Chantar, M.L.5    Kim, R.6    Kim, S.H.7
  • 17
    • 0032529009 scopus 로고    scopus 로고
    • Involvement of the C terminus in intramolecular nitrogen channeling in glucosamine 6-phosphate synthase: Evidence from a 1.6 A crystal structure of the isomerase
    • Teplyakov A, Obmolova G, Badet-Denisot MA, Badet B, Polikarpov I. Involvement of the C terminus in intramolecular nitrogen channeling in glucosamine 6-phosphate synthase: evidence from a 1.6 A crystal structure of the isomerase. Structure 1998;6:1047-1055.
    • (1998) Structure , vol.6 , pp. 1047-1055
    • Teplyakov, A.1    Obmolova, G.2    Badet-Denisot, M.A.3    Badet, B.4    Polikarpov, I.5
  • 19
    • 0032932006 scopus 로고    scopus 로고
    • The SIS domain: A phosphosugar-binding domain
    • Bateman A. The SIS domain: a phosphosugar-binding domain. Tremds Biochem Sci 1999;24:94-95.
    • (1999) Tremds Biochem Sci , vol.24 , pp. 94-95
    • Bateman, A.1
  • 20
    • 4544243688 scopus 로고    scopus 로고
    • A novel phosphoglucose/phosphomannose isomease from the crenarchaeon pyrobaculum aerophilum is a member of the pgi superfamily: Structural evidence at 1.16 A resolution
    • Swan MK, Hansen T, Schoenheit P, Davies C. A novel phosphoglucose/ phosphomannose isomease from the crenarchaeon pyrobaculum aerophilum is a member of the pgi superfamily: structural evidence at 1.16 A resolution. J Biol Chem 2004;279:39838-39845.
    • (2004) J Biol Chem , vol.279 , pp. 39838-39845
    • Swan, M.K.1    Hansen, T.2    Schoenheit, P.3    Davies, C.4
  • 21
    • 0033019834 scopus 로고    scopus 로고
    • The mechanism of sugar phosphate isomerization by glucosamine 6-phosphate synthase
    • Teplyakov A, Obmolova G, Badet-Denisot MA, Badet B. The mechanism of sugar phosphate isomerization by glucosamine 6-phosphate synthase. Protein Sci 1999;8:596-602.
    • (1999) Protein Sci , vol.8 , pp. 596-602
    • Teplyakov, A.1    Obmolova, G.2    Badet-Denisot, M.A.3    Badet, B.4
  • 22
    • 0030586024 scopus 로고    scopus 로고
    • Substrate binding is required for assembly of the active conformation of the catalytic site in ntn amidotransferases: Evidence from the 1.8 angstrom crystal structure of the glutaminase domain of glucosamine 6-phosphate synthase
    • Isupov MN, Obmolova G, Butterworth S, Badet-Denisot M-A, Badet B, Polikarpov I, Littlechild JA, Teplyakov A. Substrate binding is required for assembly of the active conformation of the catalytic site in ntn amidotransferases: evidence from the 1.8 angstrom crystal structure of the glutaminase domain of glucosamine 6-phosphate synthase. Structure 1996;4:801-810.
    • (1996) Structure , vol.4 , pp. 801-810
    • Isupov, M.N.1    Obmolova, G.2    Butterworth, S.3    Badet-Denisot, M.-A.4    Badet, B.5    Polikarpov, I.6    Littlechild, J.A.7    Teplyakov, A.8
  • 23
    • 0030044646 scopus 로고    scopus 로고
    • Biosynthesis of inner core lipopolysaccharide in enteric bacteria identification and characterization of a conserved phosphoheptose isomerase
    • Brooke JS, Valvano MA. Biosynthesis of inner core lipopolysaccharide in enteric bacteria identification and characterization of a conserved phosphoheptose isomerase. J Biol Chem 1996;271:3608-3614.
    • (1996) J Biol Chem , vol.271 , pp. 3608-3614
    • Brooke, J.S.1    Valvano, M.A.2
  • 24
    • 0026244229 scopus 로고
    • MOLSCRIPT: A program to produce both detailed and schematic plots of proteins
    • Kraulis P. MOLSCRIPT: a program to produce both detailed and schematic plots of proteins. J Appl Crystallogr 1991;24:946-950.
    • (1991) J Appl Crystallogr , vol.24 , pp. 946-950
    • Kraulis, P.1
  • 25
    • 0028057108 scopus 로고
    • Raster3D Version 2.0. A program for photorealistic molecular graphics
    • Merritt EA, Murphy ME. Raster3D Version 2.0. A program for photorealistic molecular graphics. Acta Crystallogr 1994;D50:869-873.
    • (1994) Acta Crystallogr , vol.D50 , pp. 869-873
    • Merritt, E.A.1    Murphy, M.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.