Regional gene flow and population structure of the wind-dispersed plant species Hypochaeris radicata (Asteraceae) in an agricultural landscape

Molecular Ecology

Volumn 15, Issue 7, 2006, Pages 1749-1758

  Mix, C ^a   Arens, P F P ^b   Rengelink, R ^a   Smulders, M J M ^b   Van Groenendael, J M ^a,c   Ouborg, N J ^a  

^a RADBOUD UNIVERSITY NIJMEGEN   (Netherlands)

^b WAGENINGEN UNIVERSITY   (Netherlands)

^c Department of Ecology ^*

Author keywords

Agricultural landscape; Bayesian assignment; Dispersal; Gene flow; Hypochaeris radicata; Metapopulation; Microsatellites

Indexed keywords

MICROSATELLITE DNA;

ARTICLE; ASTERACEAE; DNA SEQUENCE; ECOSYSTEM; GENE FLOW; GENETIC POLYMORPHISM; GENETICS; GEOGRAPHY; NETHERLANDS; POPULATION DENSITY; POPULATION DYNAMICS; REPRODUCTION; WIND;

ASTERACEAE; ECOSYSTEM; GENE FLOW; GEOGRAPHY; MICROSATELLITE REPEATS; NETHERLANDS; POLYMORPHISM, GENETIC; POPULATION DENSITY; POPULATION DYNAMICS; REPRODUCTION; SEQUENCE ANALYSIS, DNA; WIND;

ASTERACEAE; HYPOCHAERIS RADICATA;

EID: 33646539454     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2006.02887.x     Document Type: Article

References (61)

1. Aarssen LW 1981 The biology of Canadian weeds. 50. Hypochaeris radicata L Canadian Journal of Plant Science 61 365 381
2. Baudouin L Piry S Cornuet JM 2004 Analytical Bayesian approach for assigning individuals to populations Journal of Heredity 95 217 224
3. Berry O Tocher MD Sarre SD 2004 Can assignment tests measure dispersal? Molecular Ecology 13 551 561
4. Brown JH Kodric-Brown A 1977 Turnover rates in insular biogeography: effect of immigration on extinction Ecology 58 445 449
5. Bullock JM Clark RT 2000 Long distance seed dispersal by wind: measuring and modelling the tail of the curve Oecologia 124 506 521
6. Byers DL Waller DM 1999 Do plant populations purge their genetic load? Effects of population size and mating history on inbreeding depression Annual Review of Ecology and Systematics 30 479 513
7. Cain ML Brook GM Strand AE 2000 Long-distance seed dispersal in plant populations American Journal of Botany 87 1217 1227
8. Cegelski CC Waits LP Anderson NJ 2003 Assessing population structure and gene flow in Montana wolverines (Gulo gulo) using assignment-based approaches Molecular Ecology 12 2907 2918
9. Cody ML Overton JMcC 1996 Short-term evolution of reduced dispersal in island plant populations Journal of Ecology 84 53 61
10. Cranmer L 2004 The use of linear landscape features by pollinators PhD Thesis. University College Northampton, UK
11. Dover JW Fry GLA 2001 Experimental simulation of some visual and physical components of a hedge and the effects on butterfly behaviour in an agricultural landscape Entomologia Experimentalis et Applicata 100 221 233
12. Ehrlén J Eriksson O 2003 Large-scale spatial dynamics of plants: a response to Freckleton & Watkinson Journal of Ecology 91 316 320
13. Freckleton RP Watkinson AR 2002 Large-scale spatial dynamics of plants: metapopulations, regional ensembles and patchy populations Journal of Ecology 90 419 434
14. Fryxell PA 1957 Mode of reproduction of higher plants Botanical Review 23 135 233
15. Godt MJW Walker J Hamrick JL 1997 Genetic diversity in the endangered lily Harperocallis flava and a close relative, Tofieldia racemosa Conservation Biology 11 361 366
16. Goodell K Elam DR Nason JD Ellstrand NC 1997 Gene flow among small populations of a self-incompatible plant: an interaction between demography and genetics American Journal of Botany 84 1362 1371
17. Goudet J 1995 fstat (version 1.2): a computer program to calculate F-statistics Journal of Heredity 86 485 486
18. Goudet J 2001 fstatA computer program to calculate F-statistics, estimate and test gene diversities and fixation indices Version 2.9.3. Update from Goudet 1995
19. Griffin SR Barrett SCH 2004 Genetic variation in Trillium erectum (Melanthiaceae), a widespread forest herb in eastern North America Canadian Journal of Botany 82 316 321
20. Hartl DL Clark AG 1989 Principles of Population Genetics Cambridge University Press Cambridge, UK
21. He T Krauss SL Lamont BB Miller BP Enright NJ 2004 Long-distance seed dispersal in a metapopulation of Banskia hookeriana inferred from a population allocation analysis of amplified fragment length polymorphism data Molecular Ecology 13 1099 1109
22. Hogbin PM Ayre DJ Whelan RJ 1998 Genetic diversity and reproductive success of road verge populations of the rare shrub Grevillea barklyana (Proteaceae) Heredity 80 180 186
23. Hutchison DW Templeton AR 1999 Correlation of pairwise genetic and geographic distance measures: inferring the relative influence of gene flow and drift on the distribution of genetic variability Evolution 53 1898 1914
24. Ingvarsson PK Giles BE 1999 Kin-structured colonization and small-scale genetic differentiation in Silene dioica Evolution 53 605 611
25. Jacquemyn H Van Rossum F Brys R et al. 2003 Effects of agricultural land use and fragmentation on genetics, demography and population persistence of the rare Primula vulgaris, and implications for conservation Belgium Journal of Botany 136 5 22
26. Kalinowski ST 2004 Counting alleles with rarefaction: private alleles and hierarchical sampling designs Conservation Genetics 5 539 543
27. Kalinowski ST 2005 hp - rare 1.0: a computer program for performing rarefaction on measures of allelic richness Molecular Ecology Notes 5 187 189
28. Karron JD Thumser NN Tucker R Hussenauer AJ 1995 The influence of population density on outcrossing rates in Mimulus ringes Heredity 75 175 180
29. Kunin WE 1997 Population size and density effects in pollination: pollinator foraging and plant reproductive success in experimental arrays of Brassica kaber Journal of Ecology 85 225 234
30. Kwak MM Velterop O Andel J 1998 Pollen and gene flow in fragmented habitats Applied Vegetation Science 1 37 54
31. Lande R 1993 Risks of population extinction from demographic and environmental stochasticity and random catastrophes American Naturalist 142 911 928
32. Lennartsson T 2002 Extinction thresholds and disrupted plant-pollinator interactions in fragmented plant populations Ecology 83 3060 3072
33. Manel S Berthier P Luikart G 2002 Detecting wildlife poaching: identifying the origin of individuals with Bayesian assignment tests and multilocus genotypes Conservation Biology 16 650 659
34. Manel S Gaggiotti OE Waples RS 2005 Assignment methods: matching biological questions with appropriate techniques Trends in Ecology & Evolution 20 136 142
35. Manly BJF 1985 The Statistics of Natural Selection Chapman & Hall London
36. Mix C Arens PFP Ouborg NJ Smulders MJM 2004 Isolation and characterization of highly polymorphic microsatellite markers in Hypochaeris radicata (Asteraceae) Molecular Ecology Notes 4 656 658
37. Mix C Picó FX Van Groenendael JM Ouborg NJ 2006 Inbreeding and soil conditions affect dispersal and components of performance of two plant species in fragmented landscapes Basic and Applied Ecology 7 59 69
38. Murren CJ 2002 Effects of habitat fragmentation on pollination: pollinators, pollinia viability and reproductive success Journal of Ecology 90 100 107
39. Nei M 1973 Analysis of gene diversity in subdivided populations Proceedings of the National Academy of Sciences, USA 70 3321 3323
40. Olivieri I Michalakis Y Gouyon PH 1995 Metapopulation genetics and the evolution of dispersal American Naturalist 146 202 228
41. Ouborg NJ Eriksson O 2004 Towards a metapopulation concept for plants In Metapopulation Ecology, Genetics and Evolution (eds Hanski I Gaggiotti O pp 447 469 Academic Press San Diego, California
42. Ouborg NJ Piquot Y van Groenendael JM 1999 Population genetics, molecular markers and the study of dispersal in plants Journal of Ecology 87 551 568
43. Pálsson S 2004 Isolation by distance, based on microsatellite data, tested with spatial autocorrelation (SPAIDA) and assignment test ( spassign ) Molecular Ecology Notes 4 143 145
44. Picó FX Ouborg NJ van Groenendael JM 2004 Influence of selfing and maternal effects on life-cycle traits and dispersal ability in the herb Hypochaeris radicata (Asteraceae) Botanical Journal of the Linnean Society 146 163 170
45. Rannala B Mountain L 1997 Detecting immigration by using multilocus genotypes Proceedings of the National Academy of Sciences, USA 94 9197 9221
46. Raymond M Rousset F 1995 genepop (version 1.2): population genetics software for exact tests and ecumenicism Journal of Heredity 86 248 249
47. Rice WR 1989 Analyzing tables of statistical tests Evolution 43 223 225
48. Ronce O Brachet S Olivieri I Gouyon PH Clobert J 2005 Plastic changes in seed dispersal along ecological succession: theoretical predictions from an evolutionary model Journal of Ecology 93 431 440
49. Schaffer ML 1987 Minimum viable populations: coping with uncertainty In Viable Populations for Conservation (ed Soulé ME pp 69 86 Cambridge University Press Cambridge, UK
50. Schemske DS Husband BC Ruckelshaus MH et al. 1994 Evaluating approaches to the conservation of rare and endangered plants Ecology 75 584 606
51. Soons MB Heil GW 2002 Reduced colonization capacity in fragmented populations of wind-dispersed grassland forbs Journal of Ecology 90 1033 1043
52. Soons MB Heil GW Nathan R Katul GG 2004 Determinants of long-distance seed dispersal by wind in grasslands Ecology 85 3056 3068
53. Tackenberg O 2003 Modelling long-distance dispersal of plant diaspores by wind Ecological Monographs 73 173 189
54. Tero N Aspi J Siikamäki P Jäkäläniemi A Toumi J 2003 Genetic structure and gene flow in a metapopulation of an endangered plant species, Silene tatarica Molecular Ecology 12 2073 2085
55. Tewksbury JJ Levey DJ Haddad NM et al. 2002 Corridors affect plants, animals, and their interactions in fragmented landscapes Proceedings of the National Academy of Sciences, USA 99 12923 12926
56. Townsend PA Levey DJ 2005 An experimental test of whether habitat corridors affect pollen transfer Ecology 86 466 475
57. Van Rossum F Campos de Sousa S Triest L 2004 Genetic consequences of habitat fragmentation in an agricultural landscape on the common Primula veris, and comparison with its rare congener, P. vulgaris Conservation Genetics 5 231 245
58. Van Treuren R Bijlsma R Ouborg NJ Kwak MM 1994 Relationships between plant density, outcrossing rates and seed set in natural and experimental populations of Scabiosa columbaria Journal of Evolutionary Biology 7 287 302
59. Weir BS Cockerham CC 1984 Estimating F-statistics for the analysis of population structure Evolution 38 1358 1370
60. ST≠ 1/(4Nm + 1) Heredity 82 117 125
61. Young A Boyle T Brown T 1996 The population genetic consequences of habitat fragmentation for plants Trends in Ecology & Evolution 11 413 418