Fuzzy logic in medicine and bioinformatics

Journal of Biomedicine and Biotechnology

Volumn 2006, Issue , 2006, Pages

  Torres, Angela ^a   Nieto, Juan J ^b  

^a UNIVERSITY OF SANTIAGO DE COMPOSTELA   (Spain)

^b UNIVERSITY OF SANTIAGO DE COMPOSTELA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

CITALOPRAM; LITHIUM;

ALCOHOL ABUSE; BIOINFORMATICS; BREAST CANCER; DATA BASE; DECISION MAKING; DIABETIC NEUROPATHY; DIABETIC RETINOPATHY; HEALTH; LUNG CANCER; MODEL; MOLECULAR BIOLOGY; NUCLEAR MAGNETIC RESONANCE IMAGING; PROSTATE CANCER; REVIEW; SINGLE NUCLEOTIDE POLYMORPHISM; SYSTEMATIC REVIEW; UNCERTAINTY;

EID: 33646361042     PISSN: 11107243     EISSN: 11107251     Source Type: Journal    
DOI: 10.1155/JBB/2006/91908     Document Type: Review

References (69)

1. T H Jobe C M Helgason The fuzzy cube and causal efficacy: representation of concomitant mechanisms in stroke. Neural Networks 11 1998 3 549 555 12662829
2. C M Helgason T H Jobe Perception-based reasoning and fuzzy cardinality provide direct measures of causality sensitive to initial conditions in the individual patient (Invited paper). International Journal of Computational Cognition 1 2003 2 70 104
3. C M Helgason D S Malik S-C Cheng T H Jobe J N Mordeson Statistical versus fuzzy measures of variable interaction in patients with stroke. Neuroepidemiology 20 2001 2 77 84 11359073
4. B Kosko Neural Networks and Fuzzy Systems. Prentice-Hall Englewood Cliffs, NJ 1992
5. B Kosko Fuzzy Thinking: The New Science of Fuzzy Logic. Hyperion Press New York, NY 1993
6. K Sadegh-Zadeh Fundamentals of clinical methodology: 3. Nosology. Artificial Intelligence in Medicine 17 1999 1 87 108 10501349
7. M F Abbod D G von Keyserlingk D A Linkens M Mahfouf Survey of utilisation of fuzzy technology in Medicine and Healthcare. Fuzzy Sets and Systems 120 2001 2 331 349
8. P Marchais De l'esprit et des modes de classification en psychiatrie [Classification in psychiatry: principles, modes and ways of thinking]. Annales Medico-Psychologiques 160 2002 3 247 252
9. S Barro R Marín Fuzzy Logic in Medicine. Physica Heidelberg, Germany 2002
10. K Boegl K P Adlassnig Y Hayashi T E Rothenfluh H Leitich Knowledge acquisition in the fuzzy knowledge representation framework of a medical consultation system. Artificial Intelligence in Medicine 30 2004 1 1 26 14684262
11. M Mahfouf M F Abbod D A Linkens A survey of fuzzy logic monitoring and control utilisation in medicine. Artificial Intelligence in Medicine 21 2001 1-3 27 42 11154872
12. J N Mordeson D S Malik S-C Cheng Fuzzy Mathematics in Medicine. Physica Heidelberg, Germany 2000
13. F Steimann On the use and usefulness of fuzzy sets in medical AI. Artificial Intelligence in Medicine 21 2001 1-3 131 137 11154877
14. P S Szczepaniak P JG Lisoba J Kacprzyk Fuzzy Systems in Medicine. Physica Heidelberg, Germany 2000
15. C A Naranjo K E Bremner M Bazoon I B Turksen Using fuzzy logic to predict response to citalopram in alcohol dependence. Clinical Pharmacology and Therapeutics 62 1997 2 209 224 9284858
16. L D Lascio A Gisolfi A Albunia G Galardi F Meschi A fuzzy-based methodology for the analysis of diabetic neuropathy. Fuzzy Sets and Systems 129 2002 2 203 228
17. G Zahlmann B Kochner I Ugi Hybrid fuzzy image processing for situation assessment. IEEE Engineering in Medicine and Biology Magazine 19 2000 1 76 83 10659432
18. B A Sproule M Bazoon K I Shulman I B Turksen C A Naranjo Fuzzy logic pharmacokinetic modeling: application to lithium concentration prediction. Clinical Pharmacology and Therapeutics 62 1997 1 29 40 9246017
19. E Stip J Dufresne B Boulerice R Elie Accuracy of the Pepin method to determine appropriate lithium dosages in healthy volunteers. Journal of Psychiatry & Neuroscience 26 2001 4 330 335 11590973
20. M E Brandt T P Bohan L A Kramer J M Fletcher Estimation of CSF, white and gray matter volumes in hydrocephalic children using fuzzy clustering of MR images. Computerized Medical Imaging and Graphics 18 1994 1 25 34 8156534
21. Y Lu T Jiang Y Zang Region growing method for the analysis of functional MRI data. NeuroImage 20 2003 1 455 465 14527606
22. J A Dickerson C M Helgason The characterization of stroke subtype and science of evidence-based medicine using fuzzy logic. Journal of Neurovascular Disease 2 1997 4 138 144
23. C M Helgason T H Jobe Causal interactions, fuzzy sets and cerebrovascular "accident": the limits of evidence-based medicine and the advent of complexity-based medicine. Neuroepidemiology 18 1999 2 64 74 10023129
24. E I Papageorgiou C D Stylios P P Groumpos An integrated two-level hierarchical system for decision making in radiation therapy based on fuzzy cognitive maps. IEEE Transactions on Biomedical Engineering 50 2003 12 1326 1339 14656062
25. S Oshita K Nakakimura T Sakabe Hypertension control during anesthesia. Fuzzy logic regulation of nicardipine infusion. IEEE Engineering in Medicine and Biology Magazine 13 1994 5 667 670
26. M Johnson K Firoozbakhsh M Moniem M Jamshidi Determining flexor-tendon repair techniques via soft computing. IEEE Engineering in Medicine and Biology Magazine 20 2001 6 176 183 11838250
27. A E Hassanien Intelligent data analysis of breast cancer based on rough set theory. International Journal on Artificial Intelligence Tools 12 2003 4 465 479
28. H Seker M O Odetayo D Petrovic R N Naguib A fuzzy logic based-method for prognostic decision making in breast and prostate cancers. IEEE Transactions on Information Technology in Biomedicine 7 2003 2 114 122 12834167
29. J Schneider G Peltri N Bitterlich Fuzzy logic-based tumor marker profiles including a new marker tumor M2-PK improved sensitivity to the detection of progression in lung cancer patients. Anticancer Research 23 2003 2A 899 906 12820320
30. N Belacel M R Boulassel Multicriteria fuzzy classification procedure PROCFTN: methodology and medical application. Fuzzy Sets and Systems 141 2004 2 203 217
31. R J Stanley R H Moss W Van Stoecker C Aggarwal A fuzzy-based histogram analysis technique for skin lesion discrimination in dermatology clinical images. Computerized Medical Imaging and Graphics 27 2003 5 387 396 12821032
32. H Axer J Jantzen D G Keyserlingk G Berks The application of fuzzy-based methods to central nerve fiber imaging. Artificial Intelligence in Medicine 29 2003 3 225 239 14656488
33. G E Matt M R Turingan Q T Dinh J A Felsch M F Hovell C Gehrman Improving self-reports of drug-use: numeric estimates as fuzzy sets. Addiction 98 2003 9 1239 1247 12930211
34. G Zouridakis N N Boutros B H Jansen A fuzzy clustering approach to study the auditory P50 component in schizophrenia. Psychiatry Research 69 1997 2-3 169 181 9109185
35. E Massad N R Ortega C J Struchiner M N Burattini Fuzzy epidemics. Artificial Intelligence in Medicine 29 2003 3 241 259 14656489
36. E O Im W Chee Fuzzy logic and nursing. Nursing Philosophy 4 2003 1 53 60 14498968
37. Q M Zhu X W Sun A G Pipe A fuzzy controller to overcome EA accommodation. Proceedings of IFAC conference on new technologies for computer control 2001 Hong Kong, China 493 498
38. A Torres J J Nieto Fuzzy logic and technology in medicine and psychiatry. preprint, 2004
39. N G Bourbakis Bio-imaging and bio-informatics. IEEE Transactions on Systems, Man and Cybernetics, Part B: Cybernetics 33 2003 5 726 727
40. R Fuchs From sequence to biology: the impact on bioinformatics. Bioinformatics 18 2002 4 505 506 12016047
41. A Valencia Bioinformatics: biology by other means. Bioinformatics 18 2002 12 1551 1552 12490437
42. T Kulikova P Aldebert N Althorpe The EMBL nucleotide sequence database. Nucleic Acids Research 32 2004 database issue D27 D30 14681351
43. B C Chang S K Halgamuge Protein motif extraction with neuro-fuzzy optimization. Bioinformatics 18 2002 8 1084 1090 12176831
44. A Torres J J Nieto The fuzzy polynucleotide space: basic properties. Bioinformatics 19 2003 5 587 592 12651716
45. S Tomida T Hanai H Honda T Kobayashi Analysis of expression profile using fuzzy adaptive resonance theory. Bioinformatics 18 2002 8 1073 1083 12176830
46. M Schlosshauer M Ohlsson A novel approach to local reliability of sequence alignments. Bioinformatics 18 2002 6 847 854 12075020
47. O Cordón F Gomide F Herrera F Hoffmann L Magdalena Ten years of genetic fuzzy systems: current framework and new trends. Fuzzy Sets and Systems 141 2004 1 5 31
48. N Belacel M Čuperlović-Culf M Laflamme R Ouellette Fuzzy J-Means and VNS methods for clustering genes from microarray data. Bioinformatics 20 2004 11 1690 1701 14988127
49. Y Huang Y Li Prediction of protein subcellular locations using fuzzy k -NN method. Bioinformatics 20 2004 1 21 28 14693804
50. C Carleos F Rodriguez H Lamelas J A Baro Simulating complex traits influenced by genes with fuzzy-valued effects in pedigreed populations. Bioinformatics 19 2003 1 144 148 12499304
51. D Dembélé P Kastner Fuzzy C -means method for clustering microarray data. Bioinformatics 19 2003 8 973 980 12761060
52. A Heger L Holm Sensitive pattern discovery with 'fuzzy' alignments of distantly related proteins. Bioinformatics 19 2003 suppl 1 i130 i137 12855449
53. P J Woolf Y Wang A fuzzy logic approach to analyzing gene expression data. Physiological Genomics 3 2000 1 9 15 11015595
54. R Blankenbecler M Ohlsson C Peterson M Ringnér Matching protein structures with fuzzy alignments. Proceedings of the National Academy of Sciences of the United States of America 100 2003 21 11936 11940 14526099
55. D H Wang N K Lee T S Dillon Extraction and optimization of fuzzy protein sequence classification rules using GRBF neural networks. Neural Information Processing - Letters and Reviews 1 2003 1 53 59
56. H Ressom R Reynolds R S Varghese Increasing the efficiency of fuzzy logic-based gene expression data analysis. Physiological Genomics 13 2003 2 107 117 12595578
57. R Lukac K N Plataniotis B Smolka A N Venetsanopoulos cDNA microarray image processing using fuzzy vector filtering framework. Fuzzy Sets and Systems 152 2005 1 17 35
58. S Bandyopadhyay An efficient technique for superfamily classification of amino acid sequences: feature extraction, fuzzy clustering and prototype selection. Fuzzy Sets and Systems 152 2005 1 5 16
59. J J Nieto A Torres Midpoints for fuzzy sets and their application in medicine. Artificial Intelligence in Medicine 27 2003 1 81 101 12473393
60. J J Nieto A Torres M M Vázquez-Trasande A metric space to study differences between polynucleotides. Applied Mathematics Letters 16 2003 8 1289 1294
61. M Zaus Crisp and Soft Computing With Hypercubical Calculus. Physica Heidelberg, Germany 1999
62. J J Nieto A Torres D N Georgiou T Karakasidis Fuzzy polynucleotide spaces and metrics. to appear in Bulletin of Mathematical Biology
63. N K Kasabov Foundations of Neural Networks, Fuzzy Systems and Knowledge Engineering. MIT Press Cambridge, Mass 1996
64. P M Lewinsohn P Rohde R A Brown Level of current and past adolescent cigarette smoking as predictors of future substance use disorders in young adulthood. Addiction 94 1999 6 913 921 10665079
65. C B Nelson H U Wittchen DSM-IV alcohol disorders in a general population sample of adolescents and young adults. Addiction 93 1998 7 1065 1077 9744137
66. J Casasnovas F Rosselló Averaging fuzzy biopolymers. Fuzzy Sets and Systems 152 2005 1 139 158
67. V Castelli J-M Aury O Jaillon Whole genome sequence comparisons and "full-length" cDNA Sequences: a combined approach to evaluate and improve Arabidopsis genome annotation. Genome Research 14 2004 3 406 413 14993207
68. S T Cole R Brosch J Parkhill Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393 1998 6685 537 544 9634230
69. G Deckert P V Warren T {Gaasterland} The complete genome of the hyperthermophilic bacterium Aquifex aeolicus. Nature 392 1998 6674 353 358 9537320