The photorespiratory arabidopsis shm1 mutant is deficient in SHM1

Plant Physiology

Volumn 140, Issue 1, 2006, Pages 59-66

  Voll, Lars M ^a   Jamai, Aziz ^b   Renné, Petra ^c   Voll, Hildegard ^a   McClung, C Robertson ^b   Weber, Andreas P M ^a  

^a MICHIGAN STATE UNIVERSITY   (United States)

^b Dartmouth College   (United States)

^c UNIVERSITY OF COLOGNE   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CARBON DIOXIDE; CATALYSIS; GENES; PLANTS (BOTANY);

GLYCINE DECARBOXYLASE; PHOTORESPIRATORY PHENOTYPE;

ENZYMES;

CARBON DIOXIDE; ENZYMES; GENES; MERISTEMS; PHENOTYPES; PLANTS; SPLICING;

ARABIDOPSIS; ARABIDOPSIS THALIANA; CAULIFLOWER MOSAIC VIRUS;

ARABIDOPSIS PROTEIN; CARBON DIOXIDE; GLYCINE HYDROXYMETHYLTRANSFERASE; ISOENZYME; SHM1 PROTEIN, ARABIDOPSIS; SHM2 PROTEIN, ARABIDOPSIS;

ARABIDOPSIS; ARTICLE; ENZYMOLOGY; GENETICS; HISTOLOGY; MERISTEM; METABOLISM; MITOCHONDRION; MOLECULAR CLONING; MOLECULAR GENETICS; MUTATION; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHOTOSYNTHESIS; PHYSIOLOGY; PLANT; PLANT LEAF; PLANT ROOT; RNA SPLICING; TRANSGENIC PLANT;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; BASE SEQUENCE; CARBON DIOXIDE; CLONING, MOLECULAR; GLYCINE HYDROXYMETHYLTRANSFERASE; ISOENZYMES; MERISTEM; MITOCHONDRIA; MOLECULAR SEQUENCE DATA; MUTATION; PHENOTYPE; PHOTOSYNTHESIS; PLANT LEAVES; PLANT ROOTS; PLANT SHOOTS; PLANTS, GENETICALLY MODIFIED; RNA SPLICING;

EID: 33645813183     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.105.071399     Document Type: Article

References (40)

1. Barton MK, Poethig RS (1993) Formation of the shoot apical meristem in Arabidopsis thaliana-an analysis of development in the wild-type and in the shoot meristemless mutant. Development 119: 823-831
2. Bauwe H, Kolukisaoglu U (2003) Genetic manipulation of glycine decarboxylation. J Exp Bot 54: 1523-1535
3. Beckmann K, Dzuibany C, Biehler K, Fock H, Hell R, Migge A, Becker TW (1997) Photosynthesis and fluorescence quenching, and the mRNA levels of plastidic glutamine synthetase or of mitochondrial serine hydroxymethyltransferase (SHMT) in the leaves of the wild-type and of the SHMT-deficient stm mutant of Arabidopsis thaliana in relation to the rate of photorespiration. Planta 202: 379-386
4. Blackwell RD, Murray AJS, Lea PJ, Kendall AC, Hall NP, Turner JC, Wallsgrove RM (1988) The value of mutants unable to carry out photorespiration. Photosynth Res 16: 155-176
5. Blanc G, Wolfe KH (2003) A recent paleopolyploidy superimposed on older large-scale duplications in the Arabidopsis genome. Genome Res 13: 137-144
6. Blanc G, Wolfe KH (2004) Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution. Plant Cell 16: 1679-1691
7. Boldt R, Edner C, Kolukisaoglu U, Hagemann M, Weckwerth W, Wienkoop S, Morgenthal K, Bauwe H (2005) D-Glycerate 3-kinase, the last unknown enzyme in the photorespiratory cycle in Arabidopsis, belongs to a novel kinase family. Plant Cell 17: 2413-2420
8. Bowes G, Ogren WL (1972) Oxygen inhibition and other properties of soybean ribulose 1,5-diphosphate carboxylase. J Biol Chem 247: 2171-2176
9. Bowes G, Ogren WL, Hageman RH (1971) Phosphoglycolate production catalyzed by ribulose diphosphate carboxylase. Biochem Biophys Res Commun 45: 716-722
10. Clough SJ, Bent AF (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16: 735-743
11. Douce R, Neuburger M (1999) Biochemical dissection of photorespiration. Curr Opin Plant Biol 2: 214-222
12. Edwards K, Johnstone C, Thompson C (1991) A simple and rapid method for the preparation of plant genomic DNA for PCR analysis. Nucleic Acids Res 19: 1349
13. Geller AM, Kotb MY (1989) A binding assay for serine hydroxymethyltransferase. Anal Biochem 180: 120-125
14. Hellens RP, Edwards EA, Leyland NR, Bean S, Mullineaux PM (2000) pGreen: a versatile and flexible binary Ti vector for Agrobacterium-mediated plant transformation. Plant Mol Biol 42: 819-832
15. Höfgen R, Willmitzer L (1990) Biochemical and genetic analysis of different patatin isoforms expressed in various organs of potato (Solanum tuberosum). Plant Sci 66: 221-230
16. Jefferson RA (1989) The GUS reporter gene system. Nature 342: 837-838
17. Jefferson RA, Kavanagh TA, Bevan MW (1987) GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J 6: 3901-3907
18. Konieczny A, Ausubel FM (1993) A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based marker. Plant J 4: 403-410
19. Leegood RC, Lea PJ, Adcock MD, Häusler RE (1995) The regulation and control of photorespiration. J Exp Bot 46: 1397-1414
20. Liepman AH, Olsen LJ (2001) Peroxisomal alanine: glyoxylate aminotransferase (AGT1) is a photorespiratory enzyme with multiple substrates in Arabidopsis thaliana. Plant J 25: 487-498
21. Liepman AH, Olsen LJ (2003) Alanine aminotransferase homologs catalyze the glutamate:glyoxylate aminotransferase reaction in peroxisomes of Arabidopsis. Plant Physiol 131: 215-227
22. Linka M, Weber AP (2005) Shuffling ammonia between mitochondria and plastids during photorespiration. Trends Plant Sci 10: 461-465
23. Lister C, Dean C (1993) Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana. Plant J 4: 745-750
24. Liu Y-G, Mitsukawa N, Oosumi T, Whittier RF (1995) Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J 8: 457-463
25. Logemann J, Schell J, Willmitzer L (1987) Improved method for the isolation of RNA from plant tissues. Anal Biochem 163: 16-20
26. McClung CR, Hsu M, Painter JE, Gagne JM, Karlsberg SD, Salome PA (2000) Integrated temporal regulation of the photorespiratory pathway. Circadian regulation of two Arabidopsis genes encoding serine hydroxymethyltransferase. Plant Physiol 123: 381-391
27. Moreno JI, Martin R, Castresana C (2005) Arabidopsis SHMT1, a serine hydroxymethyltransferase that functions in the photorespiratory pathway influences resistance to biotic and abiotic stress. Plant J 41: 451-463
28. Ogren WL (1984) Photorespiration: pathways, regulation, and modification. Annu Rev Plant Biol 35: 415-442
29. Ogren WL, Bowes G (1971) Ribulose diphosphate carboxylase regulates soybean photorespiration. Nat New Biol 230: 159-160
30. Renné P, Dreßen U, Hebbeker U, Hille D, Flügge UI, Westhoff P, Weber APM (2003) The Arabidopsis mutant dct is deficient in the plastidic glutamate/malate translocator DiT2. Plant J 35: 316-331
31. Somerville CR (2001) An early Arabidopsis demonstration: resolving a few issues concerning photorespiration. Plant Physiol 125: 20-24
32. Somerville CR, Ogren WL (1981) Photorespiration-deficient mutants of Arabidopsis thaliana lacking mitochondrial serine transhydroxymethylase activity. Plant Physiol 67: 666-671
33. Somerville CR, Ogren WL (1982) Isolation of photorespiratory mutants in Arabidopsis thaliana. In M Edelman, RB Hallik, NH Chua, eds, Methods in Chloroplast Molecular Biology. Elsevier, Amsterdam, pp 129-138
34. Steinhauser D, Junker BH, Luedemann A, Selbig J, Kopka J (2004a) Hypothesis-driven approach to predict transcriptional units from gene expression data. Bioinformatics 20: 1928-1939
35. Steinhauser D, Usadel B, Luedemann A, Thimm O, Kopka J (2004b) CSB.DB: a comprehensive systems-biology database. Bioinformatics 20: 3647-3651
36. Weber A, Flügge UI (2002) Interaction of cytosolic and plastidic nitrogen metabolism in plants. J Exp Bot 53: 865-874
37. Weber A, Menzlaff E, Arbinger B, Gutensohn M, Eckerskorn C, Flügge UI (1995) The 2-oxoglutarate/malate translocator of chloroplast envelope membranes: molecular cloning of a transporter containing a 12-helix motif and expression of the functional protein in yeast cells. Biochemistry 34: 2621-2627
38. Wingler A, Lea PJ, Leegood RC (1999) Photorespiratory metabolism of glyoxylate and formate in glycine-accumulating mutants of barley and Amaranthus edulis. Planta 207: 518-526
39. Wingler A, Lea PJ, Quick WP, Leegood RC (2000) Photorespiration: metabolic pathways and their role in stress protection. Philos Trans R Soc Lond B Biol Sci 355: 1517-1529
40. Zimmermann P, Hirsch-Hoffmann M, Hennig L, Gruissem W (2004) GENEVESTIGATOR: Arabidopsis microarray database and analysis toolbox. Plant Physiol 136: 2621-2632