메뉴 건너뛰기




Volumn 48, Issue 6, 2005, Pages 1061-1069

Microsatellite megatracts in the maize (Zea mays L.) genome

Author keywords

FISH; Maize; Markers; Microsatellites; SSR

Indexed keywords

MICROSATELLITE DNA;

EID: 33645779015     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/g05-061     Document Type: Article
Times cited : (15)

References (52)
  • 1
    • 0030888229 scopus 로고    scopus 로고
    • Oat-maize chromosome addition lines: A new system for mapping the maize genome
    • U.S.A.
    • Ananiev, E.V., Riera-Lizarazu, O., Rines, H.W., and Phillips, R.L. 1997. Oat-maize chromosome addition lines: a new system for mapping the maize genome. Proc. Natl. Acad. Sci. U.S.A. 94: 3524-3529.
    • (1997) Proc. Natl. Acad. Sci. , vol.94 , pp. 3524-3529
    • Ananiev, E.V.1    Riera-Lizarazu, O.2    Rines, H.W.3    Phillips, R.L.4
  • 2
    • 0032167917 scopus 로고    scopus 로고
    • A knob-associated tandem repeat in maize capable of forming fold-back DNA segments: Are chromosome knobs megatransposons?
    • U.S.A.
    • Ananiev, E.V., Phillips, R.L., and Rines, H.W. 1998a. A knob-associated tandem repeat in maize capable of forming fold-back DNA segments: are chromosome knobs megatransposons? Proc. Natl. Acad. Sci. U.S.A. 95: 10785-10790.
    • (1998) Proc. Natl. Acad. Sci. , vol.95 , pp. 10785-10790
    • Ananiev, E.V.1    Phillips, R.L.2    Rines, H.W.3
  • 3
    • 0032573174 scopus 로고    scopus 로고
    • Nucleotide chromosome-specific molecular organization of maize (Zea mays L.) centromeric regions
    • 19986. U.S.A.
    • Ananiev, E.V., Phillips, R.L., and Rines, H.W. 19986. Nucleotide chromosome-specific molecular organization of maize (Zea mays L.) centromeric regions. Proc. Natl. Acad. Sci. U.S.A. 95: 13073-13078.
    • Proc. Natl. Acad. Sci. , vol.95 , pp. 13073-13078
    • Ananiev, E.V.1    Phillips, R.L.2    Rines, H.W.3
  • 4
    • 0031950437 scopus 로고    scopus 로고
    • Complex structure of knob DNA on Maize chromosome 9. Retrotransposon invasion into heterochromatin
    • Ananiev, E.V., Phillips, R.L., and Rines, H.W. 1998c. Complex structure of knob DNA on Maize chromosome 9. Retrotransposon invasion into heterochromatin. Genetics, 149: 2025-2037.
    • (1998) Genetics , vol.149 , pp. 2025-2037
    • Ananiev, E.V.1    Phillips, R.L.2    Rines, H.W.3
  • 5
    • 0033150329 scopus 로고    scopus 로고
    • Long tomato microsatellites are predominantly associated with centromeric regions
    • Areshchenkova, T., and Ganal, M.W. 1999. Long tomato microsatellites are predominantly associated with centromeric regions. Genome, 42: 536-544.
    • (1999) Genome , vol.42 , pp. 536-544
    • Areshchenkova, T.1    Ganal, M.W.2
  • 6
    • 0029240189 scopus 로고
    • Barley microsatellites: Allele variation and mapping
    • Becker, J., and Heun, M. 1995. Barley microsatellites: allele variation and mapping. Plant Mol. Biol. 27: 835-845.
    • (1995) Plant Mol. Biol. , vol.27 , pp. 835-845
    • Becker, J.1    Heun, M.2
  • 7
    • 0028885373 scopus 로고
    • Chromosome size in maize and sorghum using EM serial reconstructed nuclei
    • Bennett, M.D., and Laurie, D.A. 1995. Chromosome size in maize and sorghum using EM serial reconstructed nuclei. Maydica, 40: 199-204.
    • (1995) Maydica , vol.40 , pp. 199-204
    • Bennett, M.D.1    Laurie, D.A.2
  • 8
    • 0029671228 scopus 로고    scopus 로고
    • Characterization and genetic mapping of simple repeat sequences in the tomato genome
    • Broun, P., and Tanksley, S.D. 1996. Characterization and genetic mapping of simple repeat sequences in the tomato genome. Mol. Gen. Genet. 250: 39-49.
    • (1996) Mol. Gen. Genet. , vol.250 , pp. 39-49
    • Broun, P.1    Tanksley, S.D.2
  • 10
    • 0030266285 scopus 로고    scopus 로고
    • Maize simple repetitive DNA sequences: Abundance and allele variation
    • Chin, E.C., Senior, M.L., Shu, H., and Smith, J.S. 1996. Maize simple repetitive DNA sequences: abundance and allele variation. Genome, 39: 866-873.
    • (1996) Genome , vol.39 , pp. 866-873
    • Chin, E.C.1    Senior, M.L.2    Shu, H.3    Smith, J.S.4
  • 11
    • 0032444285 scopus 로고    scopus 로고
    • The chromosomal organization of simple sequence repeats in wheat and rye genomes
    • Cuadrado, A., and Schwarzacher, T. 1998. The chromosomal organization of simple sequence repeats in wheat and rye genomes. Chromosoma, 107: 587-594.
    • (1998) Chromosoma , vol.107 , pp. 587-594
    • Cuadrado, A.1    Schwarzacher, T.2
  • 12
    • 0034640011 scopus 로고    scopus 로고
    • Fourteen and counting: Unraveling trinucleotide repeat diseases
    • Cummings, C.J., and Zoghbi, H.Y. 2000. Fourteen and counting: unraveling trinucleotide repeat diseases. Hum. Mol. Genet. 9: 909-916.
    • (2000) Hum. Mol. Genet. , vol.9 , pp. 909-916
    • Cummings, C.J.1    Zoghbi, H.Y.2
  • 13
    • 84966158671 scopus 로고
    • Identical polypyrimidine-polypurine satellite DNAs in wheat and barley
    • Dennis, E.S., Gerlach, W.L., and Peacock, W.J. 1980. Identical polypyrimidine-polypurine satellite DNAs in wheat and barley. Heredity, 44: 349-366.
    • (1980) Heredity , vol.44 , pp. 349-366
    • Dennis, E.S.1    Gerlach, W.L.2    Peacock, W.J.3
  • 16
    • 0030111335 scopus 로고    scopus 로고
    • High resolution physical mapping in Arabidopsis thaliana and tomato by fluorescence in situ hybridization to extended DNA fibres
    • Frantz, P.F., Alonso-Blanco, C., Liharska, T.B., Peeters, A.J.M., Zabel, P., and de Jong, J.H. 1996. High resolution physical mapping in Arabidopsis thaliana and tomato by fluorescence in situ hybridization to extended DNA fibres. Plant J. 9: 421-430.
    • (1996) Plant J. , vol.9 , pp. 421-430
    • Frantz, P.F.1    Alonso-Blanco, C.2    Liharska, T.B.3    Peeters, A.J.M.4    Zabel, P.5    De Jong, J.H.6
  • 17
    • 0034672110 scopus 로고    scopus 로고
    • Alleviating transcript insufficiency caused by Friedreich's ataxia triplet repeats
    • Grabczyk, E., and Usdin, K. 2000. Alleviating transcript insufficiency caused by Friedreich's ataxia triplet repeats. Nucleic Acids Res. 28: 4930-4937.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 4930-4937
    • Grabczyk, E.1    Usdin, K.2
  • 19
    • 0029084336 scopus 로고
    • Zeon-1, a member of a new maize Retrotransposon family
    • Hu, W., Das, O.P., and Messing, J. 1995. Zeon-1, a member of a new maize Retrotransposon family. Mol. Gen. Genet. 248: 471-80.
    • (1995) Mol. Gen. Genet. , vol.248 , pp. 471-480
    • Hu, W.1    Das, O.P.2    Messing, J.3
  • 20
    • 0030803875 scopus 로고    scopus 로고
    • Microsatellite polymorphism in natural populations of the wild plant Arabidopsis thaliana
    • Innan, H., Terauchi, R., and Miyashita, N.T. 1997. Microsatellite polymorphism in natural populations of the wild plant Arabidopsis thaliana. Genetics, 146: 1441-1452.
    • (1997) Genetics , vol.146 , pp. 1441-1452
    • Innan, H.1    Terauchi, R.2    Miyashita, N.T.3
  • 21
    • 33645787632 scopus 로고    scopus 로고
    • Application of fiber - FISH in physical mapping of Arabidopsis thaliana
    • Jackson, S.A., Wang, M.L., Goodman, H.M., and Jiang, J. 1998. Application of fiber - FISH in physical mapping of Arabidopsis thaliana. Genome, 30: 31-36.
    • (1998) Genome , vol.30 , pp. 31-36
    • Jackson, S.A.1    Wang, M.L.2    Goodman, H.M.3    Jiang, J.4
  • 22
    • 0027285192 scopus 로고
    • The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates
    • Lagercrantz, U., Ellegren, H., and Andersson, L. 1993. The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates. Nucleic Acids Res. 21: 1111-1115.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 1111-1115
    • Lagercrantz, U.1    Ellegren, H.2    Andersson, L.3
  • 24
    • 0347991996 scopus 로고    scopus 로고
    • Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites
    • Liu, K., Goodman, M., Spencer Muse, S., Smith, J.S., Buckler, E., and Doebley, J. 2003. Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites. Genetics, 165: 2117-2128.
    • (2003) Genetics , vol.165 , pp. 2117-2128
    • Liu, K.1    Goodman, M.2    Spencer Muse, S.3    Smith, J.S.4    Buckler, E.5    Doebley, J.6
  • 25
    • 0347579843 scopus 로고    scopus 로고
    • Microsatellites in Zea - Variability, patterns of mutations, and use for evolutionary studies
    • Matsuoka, Y., Mitchell, S.E., Kresovich, S., Goodman, M., and Doebley, J. 2002. Microsatellites in Zea - variability, patterns of mutations, and use for evolutionary studies. Theor. Appl. Genetics, 104: 436-450.
    • (2002) Theor. Appl. Genetics , vol.104 , pp. 436-450
    • Matsuoka, Y.1    Mitchell, S.E.2    Kresovich, S.3    Goodman, M.4    Doebley, J.5
  • 28
    • 0027357965 scopus 로고
    • PCR-amplified microsatellites as markers in plant genetics
    • Morgante, M., and Olivieri, A.M. 1993. PCR-amplified microsatellites as markers in plant genetics. Plant J. 3: 175-182.
    • (1993) Plant J. , vol.3 , pp. 175-182
    • Morgante, M.1    Olivieri, A.M.2
  • 29
    • 0036478903 scopus 로고    scopus 로고
    • Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes
    • Morgante, M., Hanafey, M., and Powell, W. 2002. Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes. Nature Genetics, 30: 194-200.
    • (2002) Nature Genetics , vol.30 , pp. 194-200
    • Morgante, M.1    Hanafey, M.2    Powell, W.3
  • 30
    • 0034815462 scopus 로고    scopus 로고
    • Characterization of a maize chromosome 4 centromeric sequence: Evidence for an evolutionary relationship with the B chromosome centromere
    • Page, B.T., Wanous, M.K., and Birchler, J.A. 2001. Characterization of a maize chromosome 4 centromeric sequence: evidence for an evolutionary relationship with the B chromosome centromere. Genetics, 159: 291-302.
    • (2001) Genetics , vol.159 , pp. 291-302
    • Page, B.T.1    Wanous, M.K.2    Birchler, J.A.3
  • 31
    • 0029883805 scopus 로고    scopus 로고
    • Alternative structures in duplex DNA formed within the trinucleotide repeats of the myotonic dystrophy and fragile X loci
    • Pearson, C.E., and Sinden, R.R. 1996. Alternative structures in duplex DNA formed within the trinucleotide repeats of the myotonic dystrophy and fragile X loci. Biochemistry, 35: 5041-5053.
    • (1996) Biochemistry , vol.35 , pp. 5041-5053
    • Pearson, C.E.1    Sinden, R.R.2
  • 32
    • 0032562132 scopus 로고    scopus 로고
    • Interruptions in the triplet repeats of SCA1 and FRAXA reduce the propensity and complexity of slipped strand DNA (S-DNA) formation
    • Pearson, C.E., Eichler, E.E., Lorenzetti, D., Kramer, S.F., Zoghbi, H.Y., Nelson, D.L., and Sinden, R.R. 1998. Interruptions in the triplet repeats of SCA1 and FRAXA reduce the propensity and complexity of slipped strand DNA (S-DNA) formation. Biochemistry, 37: 2701-2708.
    • (1998) Biochemistry , vol.37 , pp. 2701-2708
    • Pearson, C.E.1    Eichler, E.E.2    Lorenzetti, D.3    Kramer, S.F.4    Zoghbi, H.Y.5    Nelson, D.L.6    Sinden, R.R.7
  • 33
    • 0029910876 scopus 로고    scopus 로고
    • Microsatellite repeat variation within the y1 gene of maize and teosinte
    • Phelps, T.L., Hall, A.E., and Buckner, B. 1996. Microsatellite repeat variation within the y1 gene of maize and teosinte. J. Hered. 87: 396-399.
    • (1996) J. Hered. , vol.87 , pp. 396-399
    • Phelps, T.L.1    Hall, A.E.2    Buckner, B.3
  • 34
    • 0029792620 scopus 로고    scopus 로고
    • Genepool variation in genus Glycine subgenus Soja revealed by polymorphic nuclear and chloroplast microsatellites
    • Powell, W., Morgante, M., Doyle, J.J., McNicol, J.W., Tingey, S.V., and Rafalski, A.J. 1996. Genepool variation in genus Glycine subgenus Soja revealed by polymorphic nuclear and chloroplast microsatellites. Genetics, 144: 793-803.
    • (1996) Genetics , vol.144 , pp. 793-803
    • Powell, W.1    Morgante, M.2    Doyle, J.J.3    McNicol, J.W.4    Tingey, S.V.5    Rafalski, A.J.6
  • 35
    • 0033084050 scopus 로고    scopus 로고
    • Intimate association of microsatellite repeats with retrotransposons and other dispersed repetitive elements in barley
    • Ramsay, L., Macaulay, M., Cardle, L., Morgante, M., degli Ivanissevich, S., Maestri, E., Powell, W., and Waugh, R. 1999. Intimate association of microsatellite repeats with retrotransposons and other dispersed repetitive elements in barley. Plant J. 17: 415-425.
    • (1999) Plant J. , vol.17 , pp. 415-425
    • Ramsay, L.1    Macaulay, M.2    Cardle, L.3    Morgante, M.4    Degli Ivanissevich, S.5    Maestri, E.6    Powell, W.7    Waugh, R.8
  • 36
    • 0030664357 scopus 로고    scopus 로고
    • Dynamic mutation: Possible mechanisms and significance in human disease
    • Richards, R.I., and Sutherland, G.R. 1997. Dynamic mutation: possible mechanisms and significance in human disease. Trends Biochem. Sci. 22: 432-436.
    • (1997) Trends Biochem. Sci. , vol.22 , pp. 432-436
    • Richards, R.I.1    Sutherland, G.R.2
  • 38
    • 0033208568 scopus 로고    scopus 로고
    • Development of simple sequence repeat markers in rye (Secale cereale L.)
    • Saal, B., and Wricke, G. 1999. Development of simple sequence repeat markers in rye (Secale cereale L.). Genome, 42: 964-972.
    • (1999) Genome , vol.42 , pp. 964-972
    • Saal, B.1    Wricke, G.2
  • 39
    • 0035644663 scopus 로고    scopus 로고
    • Karyotype of maize (Zea mays L.). Mitotic metaphase chromosomes as revealed by fluorescence in situ hybridization (FISH) with cytogenetic DNA markers
    • Sadder, M.T., and Weber, G. 2001. Karyotype of maize (Zea mays L.). Mitotic metaphase chromosomes as revealed by fluorescence in situ hybridization (FISH) with cytogenetic DNA markers. Plant Mol. Biol. Rep. 19: 117-123.
    • (2001) Plant Mol. Biol. Rep. , vol.19 , pp. 117-123
    • Sadder, M.T.1    Weber, G.2
  • 40
    • 23444454614 scopus 로고
    • Extraordinarily polymorphic microsatellite DNA in barley: Species diversity, chromosomal locations, and population dynamics
    • U.S.A.
    • Saghai-Maroof, M.A., Biyashev, R.M., Yang, G.P., Zhang, Q., and Allard, R.W. 1994. Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations, and population dynamics. Proc. Natl. Acad. Sci. U.S.A. 91: 5466-5470.
    • (1994) Proc. Natl. Acad. Sci. , vol.91 , pp. 5466-5470
    • Saghai-Maroof, M.A.1    Biyashev, R.M.2    Yang, G.P.3    Zhang, Q.4    Allard, R.W.5
  • 43
  • 44
    • 0029757968 scopus 로고    scopus 로고
    • The physical and genomic organization of microsatellites in sugar beet
    • USA
    • Schmidt, T., and Heslop-Harrison, J.S. 1996. The physical and genomic organization of microsatellites in sugar beet. Proc. Natl. Acad. Sci. USA. 93: 8761-8765.
    • (1996) Proc. Natl. Acad. Sci. , vol.93 , pp. 8761-8765
    • Schmidt, T.1    Heslop-Harrison, J.S.2
  • 45
    • 0027138203 scopus 로고
    • Mapping maize microsatellites and polymerase chain reaction confirmation of the targeted repeats using a CT primer
    • Senior, M.L., and Heun, M. 1993. Mapping maize microsatellites and polymerase chain reaction confirmation of the targeted repeats using a CT primer. Genome, 36: 884-889.
    • (1993) Genome , vol.36 , pp. 884-889
    • Senior, M.L.1    Heun, M.2
  • 47
    • 0034881542 scopus 로고    scopus 로고
    • Genomic interspersions determine the size and complexity of transgene loci in transgenic plants produced by microprojectile bombardment
    • Svitashev, S.K., and Somers, D.A. 2001. Genomic interspersions determine the size and complexity of transgene loci in transgenic plants produced by microprojectile bombardment. Genome, 44: 691-697.
    • (2001) Genome , vol.44 , pp. 691-697
    • Svitashev, S.K.1    Somers, D.A.2
  • 48
    • 0030113221 scopus 로고    scopus 로고
    • Simple sequence repeats for germplasm analysis and mapping in maize
    • Taramino, G., and Tingey, S. 1996. Simple sequence repeats for germplasm analysis and mapping in maize. Genome, 39: 277-287.
    • (1996) Genome , vol.39 , pp. 277-287
    • Taramino, G.1    Tingey, S.2
  • 49
    • 0036136162 scopus 로고    scopus 로고
    • Direct estimation of mutation rate for 10 microsatellite loci in durum wheat, Triticum turgidum (L.) Thell. ssp durum desf
    • Thuillet, A., Bru, D., David, J., Roumet, P., Santoni, S., Sourdille, P., and Bataillon, T. 2002. Direct estimation of mutation rate for 10 microsatellite loci in durum wheat, Triticum turgidum (L.) Thell. ssp durum desf. Mol. Biol. Evol. 19: 122-125.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 122-125
    • Thuillet, A.1    Bru, D.2    David, J.3    Roumet, P.4    Santoni, S.5    Sourdille, P.6    Bataillon, T.7
  • 50
    • 0034916097 scopus 로고    scopus 로고
    • High mutation rate and mutational bias at (TAA)n microsatellite loci in chickpea (Cicer arietinum L.)
    • Udupa, S.M., and Baum, M. 2001. High mutation rate and mutational bias at (TAA)n microsatellite loci in chickpea (Cicer arietinum L.). Mol. Genet. Genomics, 265: 1097-103.
    • (2001) Mol. Genet. Genomics , vol.265 , pp. 1097-1103
    • Udupa, S.M.1    Baum, M.2
  • 51
    • 0031062308 scopus 로고    scopus 로고
    • Molecular characterization of GATA/GACA microsatellite repeats in tomato
    • Vosman, B., and Arens, P. 1997. Molecular characterization of GATA/GACA microsatellite repeats in tomato. Genome, 40: 25-33.
    • (1997) Genome , vol.40 , pp. 25-33
    • Vosman, B.1    Arens, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.