The return of the peroxisome

Journal of Cell Science

Volumn 119, Issue 6, 2006, Pages 989-994

  van der Zand, Adabella ^a   Braakman, Ineke ^a   Geuze, Hans J ^b   Tabak, Henk F ^a  

^a UTRECHT UNIVERSITY   (Netherlands)

^b UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

Author keywords

Endoplasmic reticulum; Maintenance; Organelle; Peroxisome biogenesis; Peroxisomes; Protein import

Indexed keywords

ADENOSINE TRIPHOSPHATASE; MEMBRANE PROTEIN; PROTEIN PEX15P; PROTEIN PEX19P; PROTEIN PEX3P; SNARE PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; CELL COMPARTMENTALIZATION; CELL DIVISION; CELL FUNCTION; CELL METABOLISM; CELL ORGANELLE; CELLULAR DISTRIBUTION; ENDOPLASMIC RETICULUM; FATTY ACID OXIDATION; MOLECULAR MECHANICS; NONHUMAN; PEROXISOME; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN LOCALIZATION; PROTEIN TRANSPORT; REGULATORY MECHANISM; UBIQUITINATION;

ANIMALS; ENDOPLASMIC RETICULUM; FATTY ACIDS; HUMANS; LIPID METABOLISM; PEROXISOMES; PROTEIN TRANSPORT;

EUKARYOTA;

EID: 33645727545     PISSN: 00219533     EISSN: None     Source Type: Journal    
DOI: 10.1242/jcs.02893     Document Type: Article

References (46)

1. Azevedo, J. E., Costa-Rodrigues, J., Guimaraes, C. P., Oliveira, M. E. and Sa-Miranda, C. (2004). Protein translocation across the peroxisomal membrane. Cell Biochem. Biophys. 41, 451-468.
2. Birschmann, I., Stroobants, A. K., van den, B. M., Schafer, A., Rosenkranz, K., Kunau, W. H. and Tabak, H. F. (2003). Pex15p of Saccharomyces cerevisiae provides a molecular basis for recruitment of the AAA peroxin Pex6p to peroxisomal membranes. Mol. Biol. Cell 14, 2226-2236.
3. DeDuve, C. (1996). The birth of complex cells. Sci. Am. 274, 50-57.
4. Eckert, J. H. and Erdmann, R. (2003). Peroxisome biogenesis. Rev. Physiol. Biochem. Pharmacol. 147, 75-121.
5. Erdmann, R. and Schliebs, W. (2005). Opinion: Peroxisomal matrix protein import: the transient pore model. Nat. Rev. Mol. Cell. Biol. 6, 738-742.
6. Erdmann, R., Veenhuis, M., Mertens, D. and Kunau, W. (1989). Isolation of peroxisomes-deficient mutants of Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 86, 5419-5423.
7. Fagarasanu, M., Fagarasanu, A., Tam, Y. Y., Aitchison, J. D. and Rachubinski, R. A. (2005). Inp1p is a peroxisomal membrane protein required for peroxisome inheritance in Saccharomyces cerevisiae. J. Cell Biol. 169, 765-775.
8. Fang, Y., Morrell, J. C., Jones, J. M. and Gould, S. J. (2004). PEX3 functions as a PEX19 docking factor in the import of class 1 peroxisomal membrane proteins. J. Cell Biol. 164, 863-875.
9. Geuze, H. J., Murk, J. L., Stroobants, A. K., Griffith, J. M., Kleijmeer, M. J., Koster, A. J., Verkleij, A. J., Distel, B. and Tabak, H. F. (2003). Involvement of the endoplasmic reticulum in peroxisome formation. Mol. Biol. Cell 14, 2900-2907.
10. Gould, S. J. and Valle, D. (2000). Peroxisome biogenesis disorders - genetics and cell biology. Trends Genet. 16, 340-345.
11. Gouveia, A. M., Reguenga, C., Oliveira, M. E., Sa-Miranda, C. and Azevedo, J. E. (2000). Characterization of peroxisomal Pex5p from rat liver. Pex5p in the Pex5p-Pex14p membrane complex is a transmembrane protein. J. Biol. Chem. 275, 32444-32451.
12. Gouveia, A. M., Guimaraes, C. P., Oliveira, M. E., Reguenga, C., Sa-Miranda, C. and Azevedo, J. E. (2003). Characterization of the peroxisomal cycling receptor, Pex5p, using a cell-free in vitro import system. J. Biol. Chem. 278, 226-232.
13. Hettema, E. H., Girzalsky, W., van den, B. M., Erdmann, R. and Distel, B. (2000). Saccharomyces cerevisiae pex3p and pex19p are required for proper localization and stability of peroxisomal membrane proteins. EMBO J. 19, 223-233.
14. Hoepfner, D., van den, B. M., Philippsen, P., Tabak, H. F. and Hettema, E. H. (2001). A role for Vps1p, actin, and the Myo2p motor in peroxisome abundance and inheritance in Saccharomyces cerevisiae. J. Cell Biol. 155, 979-990.
15. Hoepfner, D., Schildknegt, D., Braakman, I., Philippsen, P. and Tabak, H. F. (2005). Contribution of the endoplasmic reticulum to peroxisome formation. Cell 122, 85-95.
16. Huh, W. K., Falvo, J. V., Gerke, L. C., Carroll, A. S., Howson, R. W., Weissman, J. S. and O'Shea, E. K. (2003). Global analysis of protein localization in budding yeast. Nature 425, 686-691.
17. Jarosch, E., Taxis, C., Volkwein, C., Bordallo, J., Finley, D., Wolf, D. H. and Sommer, T. (2002). Protein dislocation from the ER requires polyubiquitination and the AAA-ATPase Cdc48. Nat. Cell Biol. 4, 134-139.
18. Kiel, J. A., Otzen, M., Veenhuis, M. and van der Klei, I. (2005a). Obstruction of polyubiquitination affects PTS1 peroxisomal matrix protein import. Biochim. Biophys. Acta 1745, 176-186.
19. Kiel, J. A., Emmrich, K., Meyer, H. E. and Kunau, W. H. (2005b). Ubiquitination of the peroxisomal targeting signal type 1 receptor, Pex5p, suggests the presence of a quality control mechanism during peroxisomal matrix protein import. J. Biol. Chem. 280, 1921-1930.
20. Kikuchi, M., Hatano, N., Yokota, S., Shimozawa, N., Imanaka, T. and Taniguchi, H. (2004). Proteomic analysis of rat liver peroxisome - Presence of peroxisome-specific isozyme of Lon protease. J. Biol. Chem. 279, 421-428.
21. Koch, A., Thiemann, M., Grabenbauer, M., Yoon, Y., McNiven, M. A. and Schrader, M. (2003). Dynamin-like protein 1 is involved in peroxisomal fission. J. Biol. Chem. 278, 8597-8605.
22. Koch, A., Schneider, G., Luers, G. H. and Schrader, M. (2004). Peroxisome elongation and constriction but not fission can occur independently of dynamin-like protein 1. J. Cell Sci. 117, 3995-4006.
23. Koch, A., Yoon, Y., Bonekamp, N. A., McNiven, M. A. and Schrader, M. (2005). A role for Fis1 in both mitochondrial and peroxisomal fission in mammalian cells. Mol. Biol. Cell 16, 5077-5086.
24. Koerkamp, M. G., Rep, M., Bussemaker, H. J., Hardy, G. P., Mul, A., Piekarska, K., Szigyarto, C. A., De Mattos, J. M. and Tabak, H. F. (2002). Dissection of transient oxidative stress response in Saccharomyces cerevisiae by using DNA microarrays. Mol. Biol. Cell 13, 2783-2794.
25. Kragt, A., Voorn-Brouwer, T., van den, B. M. and Distel, B. (2005a). Endoplasmic reticulum-directed Pex3p routes to peroxisomes and restores peroxisome formation in a Saccharomyces cerevisiae pex3 {Delta} strain. J. Biol. Chem. 280, 34350-34357.
26. Kragt, A., Voorn-Brouwer, T., van den, B. M. and Distel, B. (2005b). The Saccharomyces cerevisiae peroxisomal import receptor Pex5p is monoubiquitinated in wild type cells. J. Biol. Chem. 280, 7867-7874.
27. Lazarow, P. B. and Fujiki, Y. (1985). Biogenesis of peroxisomes. Annu. Rev. Cell Biol. 1, 489-530.
28. Li, X. and Gould, S. J. (2003). The dynamin-like GTPase DLP1 is essential for peroxisome division and is recruited to peroxisomes in part by PEX11. J. Biol. Chem. 278, 17012-17020.
29. Marelli, M., Smith, J. J., Jung, S., Yi, E., Nesvizhskii, A. I., Christmas, R. H., Saleem, R. A., Tam, Y. Y., Fagarasanu, A., Goodlett, D. R. et al. (2004). Quantitative mass spectrometry reveals a role for the GTPase Rho1p in actin organization on the peroxisome membrane. J. Cell Biol. 167, 1099-1112.
30. Novikoff, P. M. and Novikoff, A. B. (1972). Peroxisomes in absorptive cells of mammalian small intestine. J. Cell Biol. 53, 532-560.
31. Okamoto, K. and Shaw, J. M. (2005). Mitochondrial morphology and dynamics in yeast and multicellular eukaryotes. Annu. Rev. Genet. 39, 503-536.
32. Oliveira, M. E., Gouveia, A. M., Pinto, R. A., Sa-Miranda, C. and Azevedo, J. E. (2003). The energetics of Pex5p-mediated peroxisomal protein import. J. Biol. Chem. 278, 39483-39488.
33. Platta, H. W., Girzalsky, W. and Erdmann, R. (2004). Ubiquitination of the peroxisomal import receptor Pex5p. Biochem. J. 384, 37-45.
34. Platta, H. W., Grunau, S., Rosenkranz, K., Girzalsky, W. and Erdmann, R. (2005). Functional role of the AAA peroxins in dislocation of the cycling PTS1 receptor back to the cytosol. Nat. Cell Biol. 7, 817-822.
35. Purdue, P. E. and Lazarow, P. B. (2001). Peroxisome biogenesis. Annu. Rev. Cell Dev. Biol. 17, 701-752.
36. Rachubinski, R. A., Fujiki, Y., Mortensen, R. M. and Lazarow, P. B. (1994). Acyl-Coa oxidase and hydratase-dehydrogenase, two enzymes of the peroxisomal beta-oxidation system, are synthesized on free polysomes of clofibrate-treated rat liver. J. Cell Biol. 99, 2241-2246.
37. Reguenga, C., Oliveira, M. E., Gouveia, A. M., Sa-Miranda, C. and Azevedo, J. E. (2001). Characterization of the mammalian peroxisomal import machinery: Pex2p, Pex5p, Pex12p, and Pex14p are subunits of the same protein assembly. J. Biol. Chem. 276, 29935-29942.
38. Rottensteiner, H., Kramer, A., Lorenzen, S., Stein, K., Landgraf, C., Volkmer-Engert, R. and Erdmann, R. (2004). Peroxisomal membrane proteins contain common Pex19p-binding sites that are an integral part of their targeting signals. Mol. Biol. Cell 15, 3406-3417.
39. Schekman, R. (2005). Peroxisomes: another branch of the secretory pathway? Cell 122, 1-2.
40. South, S. T., Baumgart, E. and Gould, S. J. (2001). Inactivation of the endoplasmic reticulum protein translocation factor, Sec61p, or its homolog, Ssh1p, does not affect peroxisome biogenesis. Proc. Natl. Acad. Sci. USA 98, 12027-12031.
41. Subramani, S. (1998). Components involved in peroxisome import, biogenesis, proliferation, turnover, and movement. Physiol. Rev. 78, 171-188.
42. Tabak, H. F., Murk, J. L., Braakman, I. and Geuze, H. J. (2003). Peroxisomes start their life in the endoplasmic reticulum. Traffic 4, 512-518.
43. Tam, Y. Y., Fagarasanu, A., Fagarasanu, M. and Rachubinski, R. A. (2005). Pex3p initiates the formation of a preperoxisomal compartment from a subdomain of the endoplasmic reticulum in Saccharomyces cerevisiae. J. Biol. Chem. 280, 34933-34939.
44. Titorenko, V. I., Ogrydziak, D. M. and Rachubinski, R. A. (1997). Four distinct secretory pathways serve protein secretion, cell surface growth, and peroxisome biogenesis in the yeast Yarrowia lipolytica. Mol. Cell. Biol. 17, 5210-5226.
45. Vandenbosch, H., Schutgens, R. B. H., Wanders, R. J. A. and Tager, J. M. (1992). Biochemistry of peroxisomes. Annu. Rev. Biochem. 61, 157-197.
46. Voorn-Brouwer, T., Kargt, A., Tabak, H. F. and Distel, B. (2001). Peroxisomal membrane proteins are properly targeted to peroxisomes in the absence of COPI- and COPII-mediated vesicular transport. J. Cell Sci. 114, 2199-2204.