Solution structures of stomoxyn and spinigerin, two insect antimicrobial peptides with an α-helical conformation

Biopolymers

Volumn 81, Issue 2, 2006, Pages 92-103

  Landon, Céline ^a   Meudal, Hervé ^a   Boulanger, Nathalie ^b   Bulet, Philippe ^c   Vovelle, Françoise ^a  

^a UNIVERSITÉ D'ORLÉANS   (France)

^b UNIVERSITÉ DE STRASBOURG   (France)

^c ATHERIS LABORATORIES   (Switzerland)

Author keywords

Antimicrobial peptides; Cecropin; Circular dichroism; Helical peptide; Innate immunity; Insect; NNR structure; Spinigerin; Stomoxyn; TFE

Indexed keywords

BIOLOGICAL MEMBRANES; CONFORMATIONS; FUNGI; HYDROPHOBICITY; PROTEINS; VIRUSES;

ANTIMICROBIAL PEPTIDES; CECROPIN; CIRCULAR DICHROISM; HELICAL PEPTIDES; INNATE IMMUNITY; INSECTS; NNR STRUCTURES; SPINIGERIN; STOMOXYN; TFE;

AMINO ACIDS;

AMPHOPHILE; CECROPIN A; POLYPEPTIDE ANTIBIOTIC AGENT; SPINIGERIN; STOMOXYN; TRIFLUOROETHANOL; UNCLASSIFIED DRUG; WATER;

ALPHA HELIX; AMINO TERMINAL SEQUENCE; ANTIMICROBIAL ACTIVITY; AQUEOUS SOLUTION; ARTICLE; BACTERIAL MEMBRANE; CARBOXY TERMINAL SEQUENCE; CIRCULAR DICHROISM; DRUG CONFORMATION; DRUG STRUCTURE; FLY; HYDROPHOBICITY; INNATE IMMUNITY; ISOPTERA; MOLECULAR MODEL; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEAR OVERHAUSER EFFECT; PEPTIDE SYNTHESIS; SOLID PHASE SYNTHESIS; STOMOXYS CALCITRANS; SYMPATRY; TSETSE FLY;

AMINO ACID SEQUENCE; ANIMALS; ANTIMICROBIAL CATIONIC PEPTIDES; CIRCULAR DICHROISM; MAGNETIC RESONANCE SPECTROSCOPY; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUSCIDAE; PEPTIDES; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; SOLUTIONS; TRIFLUOROETHANOL;

BACTERIA (MICROORGANISMS); FUNGI; HEXAPODA; HYALOPHORA CECROPIA; INSECTA; ISOPTERA; MACROTERMITINAE; MAMMALIA; STOMOXYS CALCITRANS;

EID: 33645644372     PISSN: 00063525     EISSN: 10970282     Source Type: Journal    
DOI: 10.1002/bip.20370     Document Type: Article

References (74)

1. Nes, I. F.; Holo, H. Biopolymers 2000, 55, 50-61.
2. Zasloff, M. Nature 2002, 415, 389-395.
3. Hancock, R. E.; Patrzykat, A. Curr Drug Targets Infect Disord 2002, 2, 79-83.
4. Tossi, A.; Sandri, L. Curr Pharm Des 2002, 8, 743-761.
5. Boman, H. G. J Intern Med 2003, 254, 197-215.
6. Shai, Y. Curr Pharm Des 2002, 8, 715-725.
7. Peschel, A. Trends Microbiol 2002, 10, 179-186.
8. Steiner, H.; Hultmark, D.; Engstrom, A.; Bennich, H.; Boman, H. G. Nature 1981, 292, 246-248.
9. Hancock, R. E.; Falla, T.; Brown, M. Adv Microbiol Physiol 1995, 37, 135-175.
10. Nicolas, P.; Mor, A. Annu Rev Microbiol 1995, 49, 277-304.
11. Bechinger, B. J Membr Biol 1997, 156, 197-211.
12. Oren, Z.; Shai, Y. Biopolymers 1998, 47, 451-463.
13. Bulet, P.; Stocklin, R.; Menin, L. Immunol Rev 2004, 198, 169-184.
14. Holak, T. A.; Engstrom, A.; Kraulis, P. J.; Lindeberg, G.; Bennich, H.; Jones, T. A.; Gronenborn, A. M.; Clore, G. M. Biochemistry 1988, 27, 7620-7629.
15. Maloy, W. L.; Kari, U. P. Biopolymers 1995, 37, 105-122.
16. Terwilliger, T. C.; Eisenberg, D. J Biol Chem 1981, 257, 6016-6022.
17. Habermann, E. Science 1972, 177, 314-322.
18. Boulanger, N.; Munks, R. J.; Hamilton, J. V.; Vovelle, F.; Brun, R.; Lehane, M. J.; Bulet, P. J Biol Chem 2002, 277, 49921-49926.
19. Haines L. R., H. R. E., Pearson T. Vector-Borne Zoonotic Dis 2003, 3, 175-186.
20. Lamberty, M.; Zachary, D.; Lanot, R.; Bordereau, C.; Robert, A.; Hoffmann, J. A.; Bulet, P. J Biol Chem 2001, 276, 4085-4092.
21. Lee, K. H.; Shin, S. Y.; Hong, J. E.; Yang, S. T.; Kim, J. I.; Hahm, K. S.; Kim, Y. Biochem Biophys Res Commun 2003, 309, 591-597.
22. Rance, M.; Sorensen, O. W.; Bodenhausen, G.; Wagner, G.; Ernst, R. R.; Wuthrich, K. Biochem Biophys Res Commun 1983, 117, 479-485.
23. Griesinger, C.; Otting, G.; Wüthrich, K.; Ernst, R. R. J Am Chem Soc 1988, 110, 7870-7872.
24. Jeener, J.; Meier, B. H.; Bachmann, P.; Ernst, R. R. J Chem Phys 1979, 71, 4546-4553.
25. Delaglio, F.; Grzesiek, S.; Vuister, G. W.; Zhu, G.; Pfeifer, J.; Bax, A. J Biomol NMR 1995, 6, 277-293.
26. Johnson, B. A.; Blevins, R. A. J Biomol NMR 1994, 4, 603-614.
27. Wuthrich, K. NMR of Proteins and Nucleic Acids; Wiley, Interscience: New York, 1986.
28. Linge, J. P.; O'Donoghue, S. I.; Nilges, M. Methods Enzymol 2001, 339, 71-90.
29. Brünger, A. T.; Adams, P. D.; Clore, G. M.; De Lano, W. L.; Gros, P.; Grosse-Kuntsleve, R. W.; Jiang, J. S.; Kuszewski, J.; Nilges, M.; Pannu, N. S.; Read, R. J.; Rice, L. M.; Simonson, T.; Warren, G. L. Acta Crystallogr D Biol Crystallogr 1998, 54, 905-921.
30. Laskowski, R. A.; Rullmannn, J. A.; MacArthur, M. W.; Kaptein, R.; Thornton, J. M. J Biomol NMR 1996, 8, 477-486.
31. Hutchinson, E. G.; Thornton, J. M. Protein Sci 1996, 5, 212-220.
32. Koradi, R.; Billeter, M.; Wuthrich, K. J Mol Graph 1996, 14, 51-55.
33. Iwai, H.; Nakajima, Y.; Natori, S.; Arata, Y.; Shimada, I. Eur J Biochem 1993, 217, 639-644.
34. Srisailam, S.; Arunkumar, A. I.; Wang, W.; Yu, C.; Chen, H. M. Biochim Biophys Acta 2000, 1479, 275-285.
35. Wang, Y.; Henz, M. E.; Gallagher, N. L.; Chai, S.; Gibbs, A. C.; Yan, L. Z.; Stiles, M. E.; Wishart, D. S.; Vederas, J. C. Biochemistry 1999, 38, 15438-15447.
36. Boisbouvier, J.; Prochnicka-Chalufour, A.; Nieto, A. R.; Torres, J. A.; Nanard, N.; Rodriguez, M. H.; Possani, L. D.; Delepierre, M. Eur J Biochem 1998, 257, 263-273.
37. Park, S. H.; Kim, Y. K.; Park, J. W.; Lee, B.; Lee, B. J. Eur J Biochem 2000, 267, 2695-2704.
38. Oh, D.; Shin, S. Y.; Kang, J. H.; Hahm, K. S.; Kim, K. L.; Kim, Y. J Pept Res 1999, 53, 578-589.
39. Gesell, J.; Zasloff, M.; Opella, S. J. J Biomol NMR 1997, 9, 127-135.
40. Yi, G. S.; Park, C. B.; Kim, S. C.; Cheong, C. FEBS Lett 1996, 398, 87-90.
41. Wegener, K. L.; Carver, J. A.; Bowie, J. H. Biopolymers 2003, 69, 42-59.
42. Corzo, G.; Escoubas, P.; Villegas, E.; Barnham, K. J.; He, W.; Norton, R. S.; Nakajima, T. Biochem J 2001, 359, 35-45.
43. Lee, K.; Shin, S. Y.; Kim, K.; Lim, S. S.; Hahm, K. S.; Kim, Y. Biochem Biophys Res Commun 2004, 323, 712-719.
44. Chorev, M.; Gurrath, M.; Behar, V.; Mammi, S.; Tonello, A.; Peggion, E. Biopolymers 1995, 36, 473-484.
45. Ragona, L.; Molinari, H.; Zetta, L.; Longhi, R.; Marchini, D.; Dallai, R.; Bernini, L. F.; Lozzi, L.; Scarselli, M.; Niccolai, N. Biopolymers 1996, 39, 653-664.
46. Matthews, B. W.; Nicholson, H.; Becktel, W. J. Proc Natl Acad Sci U S A 1987, 84, 6663-6667.
47. Fersht, A. W. H. Structure and Mechanism in Protein Science, Freeman and Company: New York, 1998, pp 508-539.
48. Christensen, B.; Fink, J.; Merrifield, R. B.; Mauzerall, D. Proc Natl Acad Sci USA 1988, 85, 5072-5076.
49. Durell, S. R.; Guy, H. R. Biophys J 1992, 62, 238-247; discussion 247-250.
50. Durell, S. R.; Raghunathan, G.; Guy, H. R. Biophys J 1992, 63, 1623-1631.
51. Lockey, T. D.; Ourth, D. D. Eur J Biochem 1996, 236, 263-271.
52. Gazit, E.; Miller, I. R.; Biggin, P. C.; Sansom, M. S.; Shai, Y. J Mol Biol 1996, 258, 860-870.
53. Gwadz, R. W.; Kaslow, D.; Lee, J. Y.; Maloy, W. L.; Zasloff, M.; Miller, L. H. Infect Immun 1989, 57, 2628-2633.
54. Akuffo, H.; Hultmark, D.; Engstom, A.; Frohlich, D.; Kimbrell, D. Int J Mol Med 1998, 1, 77-82.
55. Durvasula, R. V.; Gumbs, A.; Panackal, A.; Kruglov, O.; Aksoy, S.; Merrifield, R. B.; Richards, F. F.; Beard, C. B. Proc Natl Acad Sci USA 1997, 94, 3274-3278.
56. McGwire, B. S.; Olson, C. L.; Tack, B. F.; Engman, D. M. J Infect Dis 2003, 188, 146-152.
57. Aksoy, S.; Maudlin, I.; Dale, C.; Robinson, A. S.; O'Neill, S. L. Trends Parasitol 2001, 17, 29-35.
58. Hicks, R. P.; Mones, F.; Kim, H.; Koser, B. W.; Nichols, D. A.; Bhattacharjee, A. K. Biopolymers 2003, 68, 459-470.
59. Uteng, M.; Hauge, H. H.; Markwick, P. R.; Fimland, G.; Mantzilas, D.; Nissen-Meyer, J.; Muhle-Goll, C. Biochemistry 2003, 42, 11417-11426.
60. Matsuzaki, K. Biochim Biophys Acta 1999, 1462, 1-10.
61. Bechinger, B. Biochim Biophys Acta 1999, 1462, 157-183.
62. Hirsh, D. J.; Hammer, J.; Maloy, W. L.; Blazyk, J.; Schaefer, J. Biochemistry 1996, 35, 12733-12741.
63. Ludtke, S. J.; He, K.; Heller, W. T.; Harroun, T. A.; Yang, L.; Huang, H. W. Biochemistry 1996, 35, 13723-13728.
64. Ludtke, S. J.; He, K.; Wu, Y.; Huang, H. W. Biochim Biophys Acta 1994, 1190, 181-184.
65. Matsuzaki, K.; Murase, O.; Fujii, N.; Miyajima, K. Biochemistry 1996, 35, 11361-11368.
66. Nomura, K.; Corzo, G.; Nakajima, T.; Iwashita, T. Biophys J 2004, 87, 2497-2507.
67. Dyson, H. J.; Sayre, J. R.; Merutka, G.; Shin, H. C.; Lerner, R. A.; Wright, P. E. J Mol Biol 1992, 226, 819-835.
68. Rajan, R.; Balaram, P. Int J Pept Protein Res 1996, 48, 328-336.
69. Rohl, C. A.; Chakrabartty, A.; Baldwin, R. L. Protein Sci 1996, 5, 2623-2637.
70. McGuffin, L. J.; Bryson, K.; Jones, D. T. Bioinformatics 2000, 16, 404-405.
71. Cuff, J. A.; Barton, G. J. Proteins 1999, 34, 508-519.
72. Rost, B. Methods Enzymol 1996, 266, 525-539.
73. Punta, M.; Rost, B. Bioinformatics 2005, 21, 2960-2968.
74. Pollastri, G.; Przybylski, D.; Rost, B.; Baldi, P. Proteins 2002, 47, 228-235.