Parallel dual-color fluorescence cross-correlation spectroscopy using diffractive optical elements

Journal of Biomedical Optics

Volumn 10, Issue 5, 2005, Pages

  Gösch, Michael ^a,b   Blom, Hans ^a,b   Anderegg, Sylvain ^a,b   Korn, Kerstin ^a,b   Thyberg, Per ^a,b   Wells, Mona ^a,b   Lasser, Theo ^a,b   Rigler, Rudolf ^a,b   Magnusson, Anders ^c   Hård, Sverker ^c  

^a KAROLINSKA INSTITUTE   (Sweden)

^b EPFL   (Switzerland)

^c CHALMERS UNIVERSITY OF TECHNOLOGY   (Sweden)

Author keywords

Cross correlation; Fluorescence correlation spectroscopy; Parallel

Indexed keywords

ARTICLE; DNA MICROARRAY; EQUIPMENT; EQUIPMENT DESIGN; EVALUATION; FEASIBILITY STUDY; INSTRUMENTATION; METHODOLOGY; MULTIPHOTON MICROSCOPY; REFRACTOMETRY; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; SPECTROFLUOROMETRY;

EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; FEASIBILITY STUDIES; MICROSCOPY, FLUORESCENCE, MULTIPHOTON; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REFRACTOMETRY; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SPECTROMETRY, FLUORESCENCE;

AVALANCHE DIODES; DIFFRACTIVE OPTICS; OPTICAL DEVICES; PHOTODIODES; SPECTROSCOPY;

CROSS-CORRELATION; DUAL-COLOR SPECTROSCOPIC CONFIGURATION; FLUORESCENCE CORRELATION SPECTROSCOPY; MULTIFOCAL DUAL-COLOR EXCITATION;

FLUORESCENCE;

EID: 33645458718     PISSN: 10833668     EISSN: 15602281     Source Type: Journal    
DOI: 10.1117/1.2080707     Document Type: Article

References (25)

1. N. S. Gray, L. Wodicka, A. M. W. H. Thunnissen, T. C. Norman, S. Kwon, F. H. Espinoza, D. O. Morgan, G. Barnes, S. LeClerc, L. Meijer, S. H. Kim, D. J. Lockhart, and P. G. Schultz, "Exploiting chemical libraries, structure, and genomics in the search for kinase inhibitors," Science 281, 233-538 (1998).
2. D. Whitecomb, C. R. Newton, and S. Little, "Advantages in approaches to DNA-based diagnostics," Curr. Opin. Biotechnol. 9, 602-608 (1998).
3. A. Holmberg, "DNA-microarrays: novel techniques to study aging and guide gerontologic medicine," Exp. Gerontol. 36, 1189-1198 (2000).
4. D. J. Lockhart and E. A. Winzeler, "Genomics, gene expression and DNA arrays," Nature (London) 405, 827-836 (2000). (Pubitemid 30407861)
5. M. Schena, D. Shalon, R. W. Davis, and P. O. Brown, "Quantitative monitoring of gene expression patterns with a complementary DNA microarray," Science 270, 467-470 (1995).
6. J. Wölcke and D. Ullmann, "Miniaturized HTS technologies- μHTS," Drug Discov. Today 6, 637-646 (2001).
7. R. Rigler, Z. Földes-Papp, F. J. Meyer-Alme, C. Sammet, M. Volcker, and A. Schnetz, "Fluorescence cross-correlation: A new concept for polymerase chain reaction," J. Biotechnol. 63, 97-109 (1998). (Pubitemid 29023119)
8. A. Koltermann, U. Kettling, J. Bieschke, T. Winkler, and M. Eigen, "Rapid assay processing by integration of dual-color fluorescence cross-correlation spectroscopy: High throughput screening for enzyme activity," Proc. Natl. Acad. Sci. U.S.A. 95, 1421-1426 (1998).
9. M. Kinjo and R. Rigler, "Ultrasensitive hybridization analysis using fluorescence correlation spectroscopy," Nucleic Acids Res. 23, 1795-1799 (1995).
10. P. Schwille, F. J. MeyerAlmes, and R. Rigler, "Dual-color fluorescence cross-correlation spectroscopy for multicomponent diffusional analysis in solution," Biophys. J. 72, 1878-1886 (1997). (Pubitemid 27133126)
11. R. Rigler, U. Mets, J. Widengren, and P. Kask, "Fluorescence correlation spectroscopy with high count rate and low-background- Analysis of translational diffusion," Eur. Biophys. J. 22, 169-175 (1993). (Pubitemid 23279495)
12. H. Qian, "On the statistics of fluorescence correlation spectroscopy," Biophys. Chem. 38, 49-57 (1990). (Pubitemid 20384560)
13. D. E. Koppel,' "Statistical accuracy in fluorescence correlation spectroscopy," Phys. Rev. A 10, 1938-1945 (1974).
14. P. Kask, R. Gunther, and P. Axhausen, "Statistical accuracy in fluorescence fluctuation experiments," Eur. Biophys. J. 25, 163-169 (1997). (Pubitemid 27055915)
15. H. Blom, M. Johansson, A. S. Hedman, L. Lundberg, A. Hanning, S. Hard, and R. Rigler, "Parallel fluorescence detection of single biomolecules in microarrays by a diffractive-optical-designed 22 fanout element," Appl. Opt. 41, 3336-3342 (2002). (Pubitemid 34685235)
16. H. Blom, M. Johansson, M. Gösch, T. Sigmundsson, J. Holm, S. Hard, and R. Rigler, "Parallel flow measurements in microstructures by use of a multifocal 41 diffractive optical fan-out element," Appl. Opt. 41, 6614-6620 (2002). (Pubitemid 35355092)
17. M. Gösch, A. Serov, T. Anhut, T. Lasser, A. Rochas, P. A. Besse, R. S. Popovic, H. Blom, and R. Rigler, "Parallel single molecule detection with a fully integrated single-photon 22 CMOS detector array," J. Biomed. Opt. 95, 913-921 (2004). (Pubitemid 41268672)
18. M. W. Farn, "New iterative algorithm for the design of phase-only gratings," Proc. SPIE 1555, 34-42 (1991).
19. R. Rigler and E. S. Elson, Fluorescence Correlation Spectroscopy, Theory and Applications, Springer-Verlag, Berlin (2001).
20. O. Krichevsky and G. Bonnet, "Fluorescence correlation spectroscopy: the technique and its applications," Rep. Prog. Phys. 65, 251-297 (2002).
21. M. Gösch and R. Rigler, "Fluorescence correlation spectroscopy of molecular motions and kinetics," Adv. Drug Delivery Rev. 57, 169-190 (2005). (Pubitemid 39424071)
22. E. L. Elson and D. Magde, "Fluorescence correlation spectroscopy I: Conceptual basis and theory," Biopolymers 13, 1-27 (1974).
23. P. F. Lenne, D. Colombo, H. Giovannini, and H. Rigneault, "Flow profiles and directionality in microcapillaries measured by fluorescence correlation spectroscopy," Single Mol. 3, 194-200 (2002).
24. J. Widengren, E. Schweinberger, S. Berger, and C. A. M. Seidel, "Two new concepts to measure fluorescence resonance energy transfer via fluorescence correlation spectroscopy: Theory and experimental realizations," J. Phys. Chem. A 105, 6851-6866 (2001). (Pubitemid 35378068)
25. K. Korn, P. Gardellin, B. Liao, M. Amacker, Å. Bergström, H. Björkman, A. Camacho, S. Dörhöfer, K. Dörre, J. Enström, T. Ericson, M. Gösch, A. Honegger, S. Jaccoud, M. Lapczyna, E. Litborn, P. Thyberg, H. Winter, and R. Rigler, "Gene expression analysis using single molecule detection," Nucleic Acids Res. 31, e89 (2003).