메뉴 건너뛰기




Volumn 90, Issue 2, 2006, Pages 544-551

Conformational changes in single-strand DNA as a function of temperature by SANS

Author keywords

[No Author keywords available]

Indexed keywords

BUFFER; SINGLE STRANDED DNA; SODIUM DIHYDROGEN PHOSPHATE;

EID: 33645297711     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.105.071290     Document Type: Article
Times cited : (38)

References (17)
  • 1
    • 0032539693 scopus 로고    scopus 로고
    • A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
    • SantaLucia, J. 1998. A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc. Natl. Acad. Sci. USA. 95:1460-1465.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 1460-1465
    • Santalucia, J.1
  • 2
    • 0025875214 scopus 로고
    • The contribution of DNA single-stranded order to the thermodynamics of duplex formation
    • Vesnaver, G., and K. J. Breslauer. 1991. The contribution of DNA single-stranded order to the thermodynamics of duplex formation. Proc. Natl. Acad. Sci. USA. 88:3569-3573.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 3569-3573
    • Vesnaver, G.1    Breslauer, K.J.2
  • 3
    • 0033572750 scopus 로고    scopus 로고
    • Thermal stabilities of PNA/DNA and DNA/DNA duplexes by differential scanning calorimetry
    • Chakrabarti, M. C., and F. P. Schwarz. 1999. Thermal stabilities of PNA/DNA and DNA/DNA duplexes by differential scanning calorimetry. Nucleic Acids Res. 27:4801-4806.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 4801-4806
    • Chakrabarti, M.C.1    Schwarz, F.P.2
  • 4
    • 0033614819 scopus 로고    scopus 로고
    • Enthalpy and heat capacity changes for formation of an oligomeric DNA duplex: Interpretation in terms of coupled processes of formation and association of single-stranded helices
    • Holbrook, J. A., M. W. Capp, R. M. Saecker, and M. T. Record. 1999. Enthalpy and heat capacity changes for formation of an oligomeric DNA duplex: interpretation in terms of coupled processes of formation and association of single-stranded helices. Biochemistry. 38:8409-8422.
    • (1999) Biochemistry , vol.38 , pp. 8409-8422
    • Holbrook, J.A.1    Capp, M.W.2    Saecker, R.M.3    Record, M.T.4
  • 5
    • 0002263171 scopus 로고
    • Theory of the melting transition of synthetic polynucleotides: Evaluation of the stacking free energy
    • Crothers, D. M., and B. H. Zimm. 1964. Theory of the melting transition of synthetic polynucleotides: evaluation of the stacking free energy. J. Mol. Biol. 9:1-9.
    • (1964) J. Mol. Biol. , vol.9 , pp. 1-9
    • Crothers, D.M.1    Zimm, B.H.2
  • 6
    • 21644440950 scopus 로고    scopus 로고
    • LORES: Low resolution shape program for the calculation of small-angle scattering profiles for biological macromolecules in solution
    • Zhou, J., A. Deyheim, S. Krueger, and S. K. Gregurick. 2005. LORES: low resolution shape program for the calculation of small-angle scattering profiles for biological macromolecules in solution. Comput. Phys. Comm. 170:186-204.
    • (2005) Comput. Phys. Comm. , vol.170 , pp. 186-204
    • Zhou, J.1    Deyheim, A.2    Krueger, S.3    Gregurick, S.K.4
  • 7
    • 0033572925 scopus 로고    scopus 로고
    • Thermodynamic comparison of PNA/DNA and DNA/DNA hybridization reactions at ambient temperatures
    • Schwarz, F. P., S. Robinson, and J. M. Butler. 1999. Thermodynamic comparison of PNA/DNA and DNA/DNA hybridization reactions at ambient temperatures. Nucleic Acids Res. 27:4792-4800.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 4792-4800
    • Schwarz, F.P.1    Robinson, S.2    Butler, J.M.3
  • 8
    • 0542443295 scopus 로고    scopus 로고
    • The 30-meter small angle neutron scattering instruments at the National Institute of Standards and Technology
    • Glinka, C. J., J. G. Barker, B. Hammouda, S. Krueger, J. J. Moyer, and W. J. Orts. 1998. The 30-meter small angle neutron scattering instruments at the National Institute of Standards and Technology. J. Appl. Crystallogr. 31:430-445.
    • (1998) J. Appl. Crystallogr. , vol.31 , pp. 430-445
    • Glinka, C.J.1    Barker, J.G.2    Hammouda, B.3    Krueger, S.4    Moyer, J.J.5    Orts, W.J.6
  • 9
    • 0000933071 scopus 로고
    • Calculation of small-angle scattering profiles using Monte Carlo simulation
    • Hansen, S. 1990. Calculation of small-angle scattering profiles using Monte Carlo simulation. J. Appl. Crystallogr. 23:344-346.
    • (1990) J. Appl. Crystallogr. , vol.23 , pp. 344-346
    • Hansen, S.1
  • 10
    • 0029975888 scopus 로고    scopus 로고
    • Monte Carlo modeling of small-angle scattering data from non-interacting homogeneous and heterogeneous particles in solution
    • Henderson, S. 1996. Monte Carlo modeling of small-angle scattering data from non-interacting homogeneous and heterogeneous particles in solution. Biophys. J. 70:1618-1627.
    • (1996) Biophys. J. , vol.70 , pp. 1618-1627
    • Henderson, S.1
  • 11
    • 0001268879 scopus 로고
    • Scattering from non-crystalline substances
    • Debye, P. 1915. Scattering from non-crystalline substances. Ann. Phys. 46:809-823.
    • (1915) Ann. Phys. , vol.46 , pp. 809-823
    • Debye, P.1
  • 12
    • 0007300482 scopus 로고
    • Correlations in space and time and Born approximation scattering in systems of interacting particles
    • Van Hove, L. 1954. Correlations in space and time and Born approximation scattering in systems of interacting particles. Phys. Rev. 95:249-262.
    • (1954) Phys. Rev. , vol.95 , pp. 249-262
    • Van Hove, L.1
  • 13
    • 0002346446 scopus 로고
    • Exam: A Two-State Thermodynamic Analysis Program
    • U.S. Government Printing Office, Washington, DC
    • Kirchhoff, W. H. 1993. Exam: A Two-State Thermodynamic Analysis Program. NIST Tech. Note 1401. U.S. Government Printing Office, Washington, DC. 1-103.
    • (1993) NIST Tech. Note 1401 , pp. 1-103
    • Kirchhoff, W.H.1
  • 14
    • 0013879115 scopus 로고
    • A study of polyadenylic acid at neutral pH
    • Leng, M., and G. Felsenfeld. 1966. A study of polyadenylic acid at neutral pH. J. Mol. Biol. 15:455-466.
    • (1966) J. Mol. Biol. , vol.15 , pp. 455-466
    • Leng, M.1    Felsenfeld, G.2
  • 15
    • 0019883234 scopus 로고
    • Solvent effects on the kinetics and thermodynamics of stacking in poly(cytidylic acid)
    • Freier, S. M., K. O. Hill, T. G. Dewey, L. A. Marky, K. J. Breslauer, and D. H. Turner. 1981. Solvent effects on the kinetics and thermodynamics of stacking in poly(cytidylic acid). Biochemistry. 20:1419-1426.
    • (1981) Biochemistry , vol.20 , pp. 1419-1426
    • Freier, S.M.1    Hill, K.O.2    Dewey, T.G.3    Marky, L.A.4    Breslauer, K.J.5    Turner, D.H.6
  • 16
    • 0026684671 scopus 로고
    • Use of liquid hydrocarbon and amide transfer data to estimate contributions to thermodynamic functions of protein unfolding from the removal of nonpolar and polar surface from water
    • Spolar, R. S., J. R. Livingston, and M. T. Record, Jr. 1992. Use of liquid hydrocarbon and amide transfer data to estimate contributions to thermodynamic functions of protein unfolding from the removal of nonpolar and polar surface from water. Biochemistry. 31:3947-3955.
    • (1992) Biochemistry , vol.31 , pp. 3947-3955
    • Spolar, R.S.1    Livingston, J.R.2    Record Jr., M.T.3
  • 17
    • 0026756702 scopus 로고
    • Thermodynamics of structural stability and cooperative folding behavior in proteins
    • Murphy, K. P., and E. Freire. 1992. Thermodynamics of structural stability and cooperative folding behavior in proteins. Adv. Protein Chem. 43:313-361.
    • (1992) Adv. Protein Chem. , vol.43 , pp. 313-361
    • Murphy, K.P.1    Freire, E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.