Sequential injection analysis system for the sandwich hybridization-based detection of nucleic acids

Analytical Chemistry

Volumn 78, Issue 6, 2006, Pages 1958-1966

  Edwards, Katie A ^a   Baeumner, Antje J ^a  

^a Department of Biological and Environmental Engineering   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOTINYLATED; DYE-ENCAPSULATING; FLUOROPHORE; LIPOSOMES; OLIGONUCLEOTIDE HYBRIDIZATION; SANDWICH HYBRIDIZATION-BASED DETECTION; SEQUENTIAL INJECTION ANALYSIS LAB-ON-VALVE (SIA-LOV) SYSTEM; STREPTAVIDIN-COATED POROUS BEADS;

DNA; ENCAPSULATION; FLUORESCENCE; ULTRAVIOLET DETECTORS;

NUCLEIC ACIDS;

BIOTIN; DNA; DNA DIRECTED RNA POLYMERASE; FLUORESCEIN; FORMAMIDE; LIPOSOME; MESSENGER RNA; NUCLEIC ACID; OLIGONUCLEOTIDE; RNA DIRECTED DNA POLYMERASE;

ARTICLE; BACILLUS ANTHRACIS; BACTERIUM IDENTIFICATION; BIOTINYLATION; DNA PROBE; DNA SEQUENCE; ESCHERICHIA COLI; FLUORESCENCE; NONHUMAN; NUCLEIC ACID ANALYSIS; NUCLEIC ACID SEQUENCE BASED AMPLIFICATION; NUCLEOTIDE SEQUENCE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA SEQUENCE; SEQUENTIAL INJECTION ANALYSIS; ULTRAVIOLET RADIATION;

BIOSENSING TECHNIQUES; FLOW INJECTION ANALYSIS; NUCLEIC ACID HYBRIDIZATION; NUCLEIC ACIDS; SENSITIVITY AND SPECIFICITY; TIME FACTORS;

EID: 33645224021     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac051768a     Document Type: Article

References (42)

1. Peters, R.; van Agtmael, M.; Danner, S.; Savelkoul, P.; Vandenbroucke-Grauls, C. Lancet Infect. Dis. 2004, 4, 751-760.
2. Iqbal, S.; Mayo, M.; Bruno, J.; Bronk, B.; Batt, C.; Chambers, J. Biosens. Bioelectron. 2000, 15, 549-578.
3. Higgins, J.; Ibrahim, M.; Knauert, F.; Ludwig, G.; Kijek, T.; Ezzell, J.; Courtney, B.; Henchal, E. Ann. N. Y. Acad. Sci. 1999, 894, 130-148.
4. Ehlers, M.; Grabow, W.; Pavlov, D. Water Res. 2005, 39, 2253-2258.
5. Ellis, D.; Goodacre, R. Trends Food Sci. Technol. 2001, 12, 414-424.
6. de Boer, E.; Beumer, R. Int. J. Food Microbiol. 1999, 50, 119-130.
7. Li, Y.; Zhuang, S.; Mustapha, A. Meat Sci. 2005, 71, 402-406.
8. Malorny, B.; Tassios, P.; Rådström, P.; Cook, N.; Wagner, M.; Hoorfar, J. Int. J. Food Microbiol. 2003, 83, 39-48.
9. Pérez-Olmos, R.; Soto, J.; Zárate, N.; Araujo, N.; Lima, J.; Saraiva, M. Food Chem. 2005, 90, 471-490.
10. Reis Lima, M.; Fernandes, S.; Rangel, A. J. Agric. Food Chem. 2004, 52, 6887-6890.
11. Solich, P.; Polásek, M.; Klimundová, J.; Ruzicka, J. TrAC, Trends Anal. Chem. 2004, 23, 116-126.
12. Paula, C. A. G.; Pinto, M.; Lúcia, M. F. S.; Saraiva, Joāo L. M. Santos; Lima, J. L. F. C. Anal Chim. Acta 2005, 539, 173-179.
13. Echols, R. T.; Christensen, M. M.; Krisko, P. M.; Aldstadt, J. H. Anal Chem. 1999, 71, 2739-2744.
14. Cerdà, V.; Cerdà, A.; Cladera, A; Oms, M. T.; Mas, F.; Gómez, E.; Bauzá, F.; Miró, M.; Forteza, R.; Estela, J. M. TrAC, Trends Anal. Chem, 2001, 20, 407-418.
15. Hu, Y.; He, Y.; Qian, L.; Wang, L. Anal. Chim. Acta, 2005, 536, 251-257.
16. Economou, A. TrAC, Trends Anal. Chem, 2005, 24, 416-425.
17. Alerm, L.; Bartroli, J. Anal Chem. 1996, 68, 1394-1400.
18. Thordarson, E.; Jonsson, J. A.; Emneus, J. Anal. Chem. 2000, 72, 5280-5284.
19. Pollema, C. H.; Ruzicka, J.; Christian, G. D.; Lernmark, A. Anal. Chem. 1992, 64, 1356-1361.
20. Baxter, P. J.; Christian, G. D. Acc. Chem. Res. 1996, 29, 515-521.
21. Barnett, N.; Lenehan, C.; Lewis, S. Sequential injection analysis: an alternative approach to process analytical chemistry, TrAC, Trends Anal. Chem. 1999, 18, 346-353.
22. Ruzicka, J.; Scampavia, L. Anal Chem. 1999, 71, 257A-263A.
23. Bruckner-Lea, C.; Tsukado, T.; Dockendorff, B.; Follansbee, J.; Kingsley, M.; Ocampo, C.; Stults, J.; Chandler, D. Anal. Chim. Acta 2002, 469, 129-140.
24. Chandler, D.; Schuck, B.; Brockman, F.; Bruckner-Lea, C. Talanta 1999, 49, 969-983.
25. Bruckner-Lea, C.; Stottlemyre, M.; Holman, D.; Grate, J.; Brockman, F.; Chandler, D. Anal. Chem. 2000, 72, 4135-4141.
26. Chandler, D.; Brockman, F.; Holman, D.; Grate, J.; Bruckner-Lea, C. TrAC, Trends Anal. Chem. 2000, 19, 314-321.
27. Chandler, D.; Jarrell, A. Anal. Biochem. 2003, 312, 182-190.
28. Ruzicka, J. Analyst 2000, 125, 1053-1060.
29. Deiman, B.; van Aarle, O.; Sillekens, P. Mol. Biotechnol. 2002, 20, 163-179.
30. Cook, N. J. Microbial Methods 2003, 53, 165-174.
31. Keer, J.; Birch, L. J. Microbiol. Methods 2003, 1764, 1-9.
32. Amersham Biosciences, Sepharose and Sepharose CL instruction sheet, 71-7098-00.
33. Zymed Laboratories. Sepharose-Streptavidin Conjugate, product specification sheet.
34. Molecular Probes, MP07582, OliGreen ssDNA Quantitation Reagent and Kit, Product Information. January 13, 2001.
35. Erxleben, H.; Manion, M.; Hockenberry, D.; Scampavia, L.; Ruzicka, J. Analyst 2004, 129, 205-212.
36. Hartley, H. A rapid and sensitive Bacillus anthracis biosensor. Masters Thesis. Cornell University, Ithaca, NY, 2002.
37. Boom, R.; Sol, C.; Salimans, M.; Jansen, C.; Wertheim van Dillen, P. J. Clin. Microbiol. 1990, 28, 495-503.
38. Hartley, H.; Baeumner, A. Anal. Bioanal. Chem. 2003, 376, 319-327.
39. Gingeras, T.; Kwoh, D.; Davis, G. Nucleic Acids Res. 1987, 15, 5373-5390.
40. Peterson, A.; Wolf, L.; Georgiadis, R. J. Am. Chem. Soc. 2002, 124, 14601-14607.
41. Yu, F.; Yao, D.; Knoll, W. Nucleic Acids Res. 2004, 32, e75.
42. Keller, G.; Manak, M. DNA Probes, 2nd ed.; Macmillan Publishers Ltd.: New York, 1993; pp 1-26,