메뉴 건너뛰기




Volumn 49, Issue 1, 2006, Pages 79-86

Molecular characterization and chromosomal mapping of the 5S rRNA gene in Solea senegalensis: A new linkage to the U1, U2, and U5 small nuclear RNA genes

Author keywords

5S rDNA; Pleuronectiformes; snRNAs linkage; Solea; Soleidae

Indexed keywords

RIBOSOME DNA; RNA 5S; SMALL NUCLEAR RNA; U1 SMALL NUCLEAR RNA; U2 SMALL NUCLEAR RNA; U5 SMALL NUCLEAR RNA;

EID: 33644950327     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/g05-068     Document Type: Article
Times cited : (49)

References (40)
  • 1
    • 0023065462 scopus 로고
    • Interspersion of histone and 5S RNA genes in Artemia
    • Andrews, M., Vaughn, J., Perry, B., and Bagshaw, J. 1987. Interspersion of histone and 5S RNA genes in Artemia. Gene, 51: 61-67.
    • (1987) Gene , vol.51 , pp. 61-67
    • Andrews, M.1    Vaughn, J.2    Perry, B.3    Bagshaw, J.4
  • 3
    • 0034042124 scopus 로고    scopus 로고
    • Organization, nucleotide sequence and chromosomal mapping of a tandemly repeated unit containing the four histone genes and a 5S rRNA gene in an isopod crustacean species
    • Barzotti, R., Pelliccia, F., Bucciarelli, E., and Rocchi, A. 2000. Organization, nucleotide sequence and chromosomal mapping of a tandemly repeated unit containing the four histone genes and a 5S rRNA gene in an isopod crustacean species. Genome, 43: 341-345.
    • (2000) Genome , vol.43 , pp. 341-345
    • Barzotti, R.1    Pelliccia, F.2    Bucciarelli, E.3    Rocchi, A.4
  • 4
    • 0038779958 scopus 로고    scopus 로고
    • Identification and characterization of U1 small nuclear RNA genes from two crustacean isopod species
    • Barzotti, R., Pelliccia, F., and Rocchi, A. 2003. Identification and characterization of U1 small nuclear RNA genes from two crustacean isopod species. Chromosome Res. 11: 365-373.
    • (2003) Chromosome Res. , vol.11 , pp. 365-373
    • Barzotti, R.1    Pelliccia, F.2    Rocchi, A.3
  • 5
    • 0018890841 scopus 로고
    • A control region in the center of the 5S RNA gene directs specific initiation of transcription. II. The 3′ border of the region
    • Bogenhagen, D., Sakonju, S., and Brown, D. 1980. A control region in the center of the 5S RNA gene directs specific initiation of transcription. II. The 3′ border of the region. Cell, 19: 27-35.
    • (1980) Cell , vol.19 , pp. 27-35
    • Bogenhagen, D.1    Sakonju, S.2    Brown, D.3
  • 6
    • 0024256850 scopus 로고
    • U2 small nuclear RNA is remarkably conserved between Schizosaccharomyces pombe and Mammals
    • Brennwald, P., Porter, G., and Wise, J. 1988. U2 small nuclear RNA is remarkably conserved between Schizosaccharomyces pombe and Mammals. Mol. Cell Biol. 8: 5575-5580.
    • (1988) Mol. Cell Biol. , vol.8 , pp. 5575-5580
    • Brennwald, P.1    Porter, G.2    Wise, J.3
  • 8
    • 0041642243 scopus 로고    scopus 로고
    • Identification of sole (Solea solea) and greenland halibut (Reinhardtius hippoglossoides) by PCR amplification of the 5S rDNA gene
    • Céspedes, A., García, T., Carrera, E., González, I., Fernández, A., Hernández, P., and Martín, R. 1999. Identification of sole (Solea solea) and greenland halibut (Reinhardtius hippoglossoides) by PCR amplification of the 5S rDNA gene. J. Agric. Food Chem. 47: 1046-1050.
    • (1999) J. Agric. Food Chem. , vol.47 , pp. 1046-1050
    • Céspedes, A.1    García, T.2    Carrera, E.3    González, I.4    Fernández, A.5    Hernández, P.6    Martín, R.7
  • 9
    • 0038041341 scopus 로고    scopus 로고
    • Nucleolar organizing regions in Crassostrea angulata: Chromosomal location and polymorphism
    • Cross, I., Vega, L., and Rebordinos, L. 2003. Nucleolar organizing regions in Crassostrea angulata: chromosomal location and polymorphism. Genetica, 119: 65-74.
    • (2003) Genetica , vol.119 , pp. 65-74
    • Cross, I.1    Vega, L.2    Rebordinos, L.3
  • 10
    • 0033577767 scopus 로고    scopus 로고
    • Transcription of the human U2 snRNA genes continues beyond the 3′ box in vivo
    • Cuello, P., Boyd, D., Dye, M., Proudfoot, N., and Murphy, S. 1999. Transcription of the human U2 snRNA genes continues beyond the 3′ box in vivo. EMBO J. 18: 2867-2877.
    • (1999) EMBO J. , vol.18 , pp. 2867-2877
    • Cuello, P.1    Boyd, D.2    Dye, M.3    Proudfoot, N.4    Murphy, S.5
  • 11
    • 0018177693 scopus 로고
    • Evolution of the 5S RNA genes in vertebrates
    • Denis, H., and Wegnez, M. 1978. Evolution of the 5S RNA genes in vertebrates. J. Mol. Evol. 12: 11-15.
    • (1978) J. Mol. Evol. , vol.12 , pp. 11-15
    • Denis, H.1    Wegnez, M.2
  • 12
    • 0028919668 scopus 로고
    • The concerted evolution of 5S ribosomal RNA genes linked to the repeat units of other multigene families
    • Drouin, G., and Moniz de Sá, M. 1995. The concerted evolution of 5S ribosomal RNA genes linked to the repeat units of other multigene families. Mol. Biol. Evol. 12: 481-493.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 481-493
    • Drouin, G.1    Moniz De Sá, M.2
  • 13
    • 0026675037 scopus 로고
    • Variable arrangement of 5S ribosomal genes within the ribosomal DNA repeats of arthropods
    • Drouin, G., Sévigny, J., McLaren, I., Hofman, J., and Doolitle, W. 1992. Variable arrangement of 5S ribosomal genes within the ribosomal DNA repeats of arthropods. Mol. Biol. Evol. 9: 826-835.
    • (1992) Mol. Biol. Evol. , vol.9 , pp. 826-835
    • Drouin, G.1    Sévigny, J.2    McLaren, I.3    Hofman, J.4    Doolitle, W.5
  • 14
    • 0032996736 scopus 로고    scopus 로고
    • Trans-splicing and cis-splicing in the colourless Euglenoid, Entosiphon sulcatum
    • Ebel, C., Frantz, C., Paulus, F., and Imbault, P. 1999. Trans-splicing and cis-splicing in the colourless Euglenoid, Entosiphon sulcatum. Curr. Genet. 35: 542-550.
    • (1999) Curr. Genet. , vol.35 , pp. 542-550
    • Ebel, C.1    Frantz, C.2    Paulus, F.3    Imbault, P.4
  • 15
    • 0024989803 scopus 로고
    • The 5′ flanking sequence of the loach oocyte 5S rRNA gene contains a signal for effective transcription
    • Felgenhauer, P., Sedman, J., Shostak, N., Timofeeva, M., Lind, A., and Bayev, A. 1990. The 5′ flanking sequence of the loach oocyte 5S rRNA gene contains a signal for effective transcription. Gene, 90: 243-248.
    • (1990) Gene , vol.90 , pp. 243-248
    • Felgenhauer, P.1    Sedman, J.2    Shostak, N.3    Timofeeva, M.4    Lind, A.5    Bayev, A.6
  • 16
    • 0028293919 scopus 로고
    • Architecture of the U5 small nuclear RNA
    • Frank, D., Roiha, H., and Guthrie, C. 1994. Architecture of the U5 small nuclear RNA. Mol. Cell Biol. 14: 2180-2190.
    • (1994) Mol. Cell Biol. , vol.14 , pp. 2180-2190
    • Frank, D.1    Roiha, H.2    Guthrie, C.3
  • 17
    • 0003706632 scopus 로고    scopus 로고
    • Gene duplication, exon shuffling and concerted evolution
    • Edited by W.H. Li and D. Graur. Sinauer Associates, Inc. Sunderland, Mass., USA. pp
    • Graur, D., and Li, W. 2000. Gene duplication, exon shuffling and concerted evolution. In Fundamentals of molecular evolution. Edited by W.H. Li and D. Graur. Sinauer Associates, Inc. Sunderland, Mass., USA. pp.
    • (2000) Fundamentals of Molecular Evolution
    • Graur, D.1    Li, W.2
  • 18
    • 8544257378 scopus 로고    scopus 로고
    • Mapping of the 18S and 5S ribosomal RNA genes in the fish Prochilodus argenteus Agassiz, 1829 (Characiformes, Prochilodontidae)
    • Hatanaka, T., and Galetti, P.J. 2004. Mapping of the 18S and 5S ribosomal RNA genes in the fish Prochilodus argenteus Agassiz, 1829 (Characiformes, Prochilodontidae). Genetica, 122: 239-244.
    • (2004) Genetica , vol.122 , pp. 239-244
    • Hatanaka, T.1    Galetti, P.J.2
  • 19
    • 19944383832 scopus 로고    scopus 로고
    • Phylogenetic relationships among ten sole species (Soleidae, Pleuronectiformes) from the Gulf of Cadiz (Spain) based on mitochondrial DNA sequences
    • Infante, C., Catanese, G., and Manchado, M. 2004. Phylogenetic relationships among ten sole species (Soleidae, Pleuronectiformes) from the Gulf of Cadiz (Spain) based on mitochondrial DNA sequences. Mar. Biotechnol. 6: 612-624.
    • (2004) Mar. Biotechnol. , vol.6 , pp. 612-624
    • Infante, C.1    Catanese, G.2    Manchado, M.3
  • 20
    • 0242579633 scopus 로고    scopus 로고
    • Chromosomal characteristics or rDNA in European grayling Thymallus thymallus (Salmonidae)
    • Jankun, M., Ocalewicz, K., Pardo, B., Martínez, P., Woznicki, P., and Sánchez, L. 2003. Chromosomal characteristics or rDNA in European grayling Thymallus thymallus (Salmonidae). Genetica, 119: 219-224.
    • (2003) Genetica , vol.119 , pp. 219-224
    • Jankun, M.1    Ocalewicz, K.2    Pardo, B.3    Martínez, P.4    Woznicki, P.5    Sánchez, L.6
  • 21
    • 0030845678 scopus 로고    scopus 로고
    • Linkage of 5S ribosomal DNA to other rDNAs in the chromophytic algae and related taxa
    • Kawai, H., Nakayama, T., Inouye, I., and Kato, A. 1997. Linkage of 5S ribosomal DNA to other rDNAs in the chromophytic algae and related taxa. J. Phycol. 33: 505-511.
    • (1997) J. Phycol. , vol.33 , pp. 505-511
    • Kawai, H.1    Nakayama, T.2    Inouye, I.3    Kato, A.4
  • 22
    • 33644956679 scopus 로고
    • Differentiation of oocyte- and somatic-type 5S rRNAs in animals
    • Komiya, H., Hasegawa, M., and Takemura, S. 1986. Differentiation of oocyte- and somatic-type 5S rRNAs in animals. J. Biochem. 86: 1067-1080.
    • (1986) J. Biochem. , vol.86 , pp. 1067-1080
    • Komiya, H.1    Hasegawa, M.2    Takemura, S.3
  • 23
    • 0031033604 scopus 로고    scopus 로고
    • Concerted evolution of the tandemly repeated genes encoding human U2 snRNA (the RNU2 locus) involves rapid intrachromosomal homogenization and rare interchromosomal gene conversion
    • Liao, D., Pavelitz, T., Kidd, J., Kidd, K., and Weiner, A. 1997. Concerted evolution of the tandemly repeated genes encoding human U2 snRNA (the RNU2 locus) involves rapid intrachromosomal homogenization and rare interchromosomal gene conversion. EMBO J. 16: 588-598.
    • (1997) EMBO J. , vol.16 , pp. 588-598
    • Liao, D.1    Pavelitz, T.2    Kidd, J.3    Kidd, K.4    Weiner, A.5
  • 24
    • 0032858692 scopus 로고    scopus 로고
    • Chromosomal localization of 5S rDNA genes in Leporinus fish (Anostomidae, Characiformes)
    • Martins, C., and Galetti, P.J. 1999. Chromosomal localization of 5S rDNA genes in Leporinus fish (Anostomidae, Characiformes). Chromosome Res. 7.
    • (1999) Chromosome Res. , vol.7
    • Martins, C.1    Galetti, P.J.2
  • 25
    • 0034752520 scopus 로고    scopus 로고
    • Organization of 5S rDNA in species of the fish Leporinus: Two different genomic locations are characterized by distinct nontrancribed spacers
    • Martins, C., and Galetti, P.J. 2001. Organization of 5S rDNA in species of the fish Leporinus: two different genomic locations are characterized by distinct nontrancribed spacers. Genome, 44: 903-910.
    • (2001) Genome , vol.44 , pp. 903-910
    • Martins, C.1    Galetti, P.J.2
  • 26
    • 33644947915 scopus 로고    scopus 로고
    • Nucleotide sequence of 5S rDNA and localization of the ribosomal RNA genes to metaphase cromosomes of the tilapiine cichlid fish, Oreochromis niloticus
    • Martins, C., Wasko, A., Oliveira, C., and Wright, J. 2000. Nucleotide sequence of 5S rDNA and localization of the ribosomal RNA genes to metaphase cromosomes of the tilapiine cichlid fish, Oreochromis niloticus. Hereditas, 124: 95-97.
    • (2000) Hereditas , vol.124 , pp. 95-97
    • Martins, C.1    Wasko, A.2    Oliveira, C.3    Wright, J.4
  • 29
    • 1042292683 scopus 로고    scopus 로고
    • 5S rDNA organization in the fish Synbranchus marmoratus (Synbranchidae, Synbranchiformes)
    • Messias, L., Ferreira, D., Wasko, A., Oliveira, C., Foresti, F., and Martins, C. 2003. 5S rDNA organization in the fish Synbranchus marmoratus (Synbranchidae, Synbranchiformes). Hereditas, 139: 228-231.
    • (2003) Hereditas , vol.139 , pp. 228-231
    • Messias, L.1    Ferreira, D.2    Wasko, A.3    Oliveira, C.4    Foresti, F.5    Martins, C.6
  • 30
    • 0019878355 scopus 로고
    • Sequence of U1 RNA from Drosophila melanogaster: Implications for U1 secondary structure and possible involvement in splicing
    • Mount, S., and Steiz, J. 1981. Sequence of U1 RNA from Drosophila melanogaster: implications for U1 secondary structure and possible involvement in splicing. Nucleic Acids Res. 9: 6351-6368.
    • (1981) Nucleic Acids Res. , vol.9 , pp. 6351-6368
    • Mount, S.1    Steiz, J.2
  • 31
    • 0024316419 scopus 로고
    • The Xenopus U2 gene PSE is a single, compact element required for transcription initiation and 3′ end formation
    • Parry, H., Tebb, G., and Mattaj, I. 1989. The Xenopus U2 gene PSE is a single, compact element required for transcription initiation and 3′ end formation. Nucleic Acids Res. 17: 3633-3644.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 3633-3644
    • Parry, H.1    Tebb, G.2    Mattaj, I.3
  • 32
    • 0034884568 scopus 로고    scopus 로고
    • 5S ribosomal and U1 small nuclear RNA genes: A new linkage type in the genome of a crustacean that has three different tandemly repeated units containing 5S ribosomal DNA sequences
    • Pelliccia, F., Barzotti, R., Bucciarelli, E., and Rocchi, A. 2001. 5S ribosomal and U1 small nuclear RNA genes: a new linkage type in the genome of a crustacean that has three different tandemly repeated units containing 5S ribosomal DNA sequences. Genome, 44: 331-335.
    • (2001) Genome , vol.44 , pp. 331-335
    • Pelliccia, F.1    Barzotti, R.2    Bucciarelli, E.3    Rocchi, A.4
  • 33
    • 0028365976 scopus 로고
    • Chromosomal mapping and nucleotide sequence of two tandem repeats of Atlantic salmon 5S rDNA
    • Pendás, A., Morán, P., Freije, J., and García- Vázquez, E. 1994. Chromosomal mapping and nucleotide sequence of two tandem repeats of Atlantic salmon 5S rDNA. Cytogenet. Cell Genet. 67: 31-36.
    • (1994) Cytogenet. Cell Genet. , vol.67 , pp. 31-36
    • Pendás, A.1    Morán, P.2    Freije, J.3    García-Vázquez, E.4
  • 34
    • 0033850577 scopus 로고    scopus 로고
    • On the variability of MboI repeated sequences and 5S rDNA in Muraena helena and Gymnothorax unicolor (Anguilliformes, Muraenidae)
    • Pichiri, G., Coni, P., Deiana, A., Nieddu, M., and Mezzanotte, R. 2000. On the variability of MboI repeated sequences and 5S rDNA in Muraena helena and Gymnothorax unicolor (Anguilliformes, Muraenidae). Chromosome Res. 8: 443-445.
    • (2000) Chromosome Res. , vol.8 , pp. 443-445
    • Pichiri, G.1    Coni, P.2    Deiana, A.3    Nieddu, M.4    Mezzanotte, R.5
  • 35
    • 0023657449 scopus 로고
    • The 5S gene internal control region is composed of three distinct sequence elements, organized as two functional domains with variable spacing
    • Pieler, T., Hamm, J., and Roeder, R. 1987. The 5S gene internal control region is composed of three distinct sequence elements, organized as two functional domains with variable spacing. Cell, 48: 91-100.
    • (1987) Cell , vol.48 , pp. 91-100
    • Pieler, T.1    Hamm, J.2    Roeder, R.3
  • 37
    • 0031838692 scopus 로고    scopus 로고
    • Intraindividual and interspecies variation in the 5S rDNA of Coregonid fish
    • Sajdak, S., Reed, K., and Phillips, R. 1998. Intraindividual and interspecies variation in the 5S rDNA of Coregonid fish. J. Mol. Evol. 46: 680-688.
    • (1998) J. Mol. Evol. , vol.46 , pp. 680-688
    • Sajdak, S.1    Reed, K.2    Phillips, R.3
  • 38
    • 0034190182 scopus 로고    scopus 로고
    • Mitochondrial DNA variation, phylogenetic relationships, and evolution of four Mediterranean genera of soles (Soleidae, Pleuronectiformes)
    • Tinti, F., Piccinetti, C., Tommasini, S., and Vallisneri, M. 2000. Mitochondrial DNA variation, phylogenetic relationships, and evolution of four Mediterranean genera of soles (Soleidae, Pleuronectiformes). Mar. Biotechnol. 2: 274-284.
    • (2000) Mar. Biotechnol. , vol.2 , pp. 274-284
    • Tinti, F.1    Piccinetti, C.2    Tommasini, S.3    Vallisneri, M.4
  • 39
    • 0034752663 scopus 로고    scopus 로고
    • Molecular organization of 5S rDNA in fishes of the genus Brycon
    • Wasko, A., Martins, C., Wright, J., and Galetti, P.J. 2001. Molecular organization of 5S rDNA in fishes of the genus Brycon. Genome, 44: 893-902.
    • (2001) Genome , vol.44 , pp. 893-902
    • Wasko, A.1    Martins, C.2    Wright, J.3    Galetti, P.J.4
  • 40
    • 0021433228 scopus 로고
    • Xenopus laevis U1 snRNA genes: Characterization of transcriptionally active genes reveals major and minor repeated gene families
    • Zeller, R., Carri, M., Mattaj, I., and De Robertis, E. 1984. Xenopus laevis U1 snRNA genes: characterization of transcriptionally active genes reveals major and minor repeated gene families. EMBO J. 3: 1075-1081.
    • (1984) EMBO J. , vol.3 , pp. 1075-1081
    • Zeller, R.1    Carri, M.2    Mattaj, I.3    De Robertis, E.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.