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Volumn 6, Issue , 2006, Pages

Sca1, a previously undescribed paralog from autotransporter protein-encoding genes in Rickettsia species

Author keywords

[No Author keywords available]

Indexed keywords

ALPHA AMINO 3 HYDROXY 5 METHYL 4 ISOXAZOLEPROPIONIC ACID; ATAXIN 1; CELL ANTIGEN; BACTERIAL PROTEIN; MEMBRANE ANTIGEN; MULTIENZYME COMPLEX; OUTER MEMBRANE PROTEIN;

EID: 33644768306     PISSN: 14712180     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-6-12     Document Type: Article
Times cited : (46)

References (40)
  • 1
    • 0347783143 scopus 로고
    • Ultrastucture of the surface of Rickettsia prowazeki and Rickettsia akari
    • Palmer EL, Martin ML, Mallavia L: Ultrastucture of the surface of Rickettsia prowazeki and Rickettsia akari. Appl Microbiol 1974, 28:713-716.
    • (1974) Appl Microbiol , vol.28 , pp. 713-716
    • Palmer, E.L.1    Martin, M.L.2    Mallavia, L.3
  • 2
    • 0029879718 scopus 로고    scopus 로고
    • Identification and characterization of epitopes on the 120- Kilodalton surface protein antigen of Rickettsiaprowazekii with synthetic peptides
    • Ching WM, Wang H, Jan B, Dasch GA: Identification and characterization of epitopes on the 120- kilodalton surface protein antigen of Rickettsiaprowazekii with synthetic peptides. Infect Immun 1996, 64:1413-1419.
    • (1996) Infect Immun , vol.64 , pp. 1413-1419
    • Ching, W.M.1    Wang, H.2    Jan, B.3    Dasch, G.A.4
  • 3
    • 0026584562 scopus 로고
    • Mapping of monoclonal antibody binding sites on CNBr fragments of the S- layerprotein antigens of Rickettsia typhi and Rickettsia prowazekii
    • Ching WM, Carl M, Dasch GA: Mapping of monoclonal antibody binding sites on CNBr fragments of the S- layerprotein antigens of Rickettsia typhi and Rickettsia prowazekii. Molecular Immunology 1992, 29:95-105.
    • (1992) Molecular Immunology , vol.29 , pp. 95-105
    • Ching, W.M.1    Carl, M.2    Dasch, G.A.3
  • 4
    • 0024989330 scopus 로고
    • Structural analyses of the 120-kDa serotype protein antigens of typhus group rickettsiae. Comparison with other S-layer proteins
    • Ching WM, Dasch GA, Carl M, Dobson ME: Structural analyses of the 120-kDa serotype protein antigens of typhus group rickettsiae. Comparison with other S-layer proteins. Ann N Y Acad Sci 1990, 590:334-351.
    • (1990) Ann N Y Acad Sci , vol.590 , pp. 334-351
    • Ching, W.M.1    Dasch, G.A.2    Carl, M.3    Dobson, M.E.4
  • 5
    • 0019417682 scopus 로고
    • Isolation of species-specific protein antigens of Rickettsia typhi and Rickettsia prowazekii for immunodiagnosis and immunoprophylaxis
    • Dasch GA: Isolation of species-specific protein antigens of Rickettsia typhi and Rickettsia prowazekii for immunodiagnosis and immunoprophylaxis. J Clin Microbiol 1981, 14:333-341.
    • (1981) J Clin Microbiol , vol.14 , pp. 333-341
    • Dasch, G.A.1
  • 6
    • 0023107123 scopus 로고
    • Neutralizing activity of monoclonal antibodies to heat-sensitive and heat-resistant epitopes of Rickettsia rickettsii surface proteins
    • Anacker RL, McDonald GA, List RH, Mann RE: Neutralizing activity of monoclonal antibodies to heat-sensitive and heat-resistant epitopes of Rickettsia rickettsii surface proteins. Infect immun 1987, 55:825-827.
    • (1987) Infect Immun , vol.55 , pp. 825-827
    • Anacker, R.L.1    McDonald, G.A.2    List, R.H.3    Mann, R.E.4
  • 7
    • 0025191007 scopus 로고
    • A recombinant Rickettsia conorii vaccine protects guinea pigs from experimental boutonneuse fever and Rocky Mountain spotted fever
    • Vishwanath S, McDonald GA, Watkins NG: A recombinant Rickettsia conorii vaccine protects guinea pigs from experimental boutonneuse fever and Rocky Mountain spotted fever. Infect Immun 1990, 58:646-653.
    • (1990) Infect Immun , vol.58 , pp. 646-653
    • Vishwanath, S.1    McDonald, G.A.2    Watkins, N.G.3
  • 8
    • 0024377313 scopus 로고
    • Cloning, expression and sequence analysis of the gene encoding the 120 kD surface-exposed protein of Rickettsia rickettsii
    • Gilmore RDJ, Joste N, McDonald GA: Cloning, expression and sequence analysis of the gene encoding the 120 kD surface-exposed protein of Rickettsia rickettsii. Mol Microbiol 1989, 3:1579-1586.
    • (1989) Mol Microbiol , vol.3 , pp. 1579-1586
    • Gilmore, R.D.J.1    Joste, N.2    McDonald, G.A.3
  • 9
    • 0026095617 scopus 로고
    • The 120 kilodalton outer membrane protein (rOmpB) of Rickettsia rickettsii is encoded by an unusually long open reading frame. Evidence for protein processing from a large precursor
    • Gilmore RD, Cieplak W, Policastro PF, Hackstadt T: The 120 kilodalton outer membrane protein (rOmpB) of Rickettsia rickettsii is encoded by an unusually long open reading frame. Evidence for protein processing from a large precursor. Mol Microbiol 1991, 5:2361-2370.
    • (1991) Mol Microbiol , vol.5 , pp. 2361-2370
    • Gilmore, R.D.1    Cieplak, W.2    Policastro, P.F.3    Hackstadt, T.4
  • 10
    • 0026536537 scopus 로고
    • Comparison of Western immunoblotting and microimmunofluoresence for diagnosis of Mediterranean spotted fever
    • Teysseire N, Raoult D: Comparison of Western immunoblotting and microimmunofluoresence for diagnosis of Mediterranean spotted fever. J Clin Microbiol 1992, 30:455-460.
    • (1992) J Clin Microbiol , vol.30 , pp. 455-460
    • Teysseire, N.1    Raoult, D.2
  • 11
    • 0031803204 scopus 로고    scopus 로고
    • RompA is a critical protein for the adhesion of Rickettsia rickettsii to host cells
    • Li H, Walker DH: RompA is a critical protein for the adhesion of Rickettsia rickettsii to host cells. Microbial Pathogenesis 1998, 24:289-298.
    • (1998) Microbial Pathogenesis , vol.24 , pp. 289-298
    • Li, H.1    Walker, D.H.2
  • 12
    • 0001655725 scopus 로고    scopus 로고
    • Role of major surface antigens of Rickettsia japonica in the attachment to host cell
    • Edited by: Kazar J and Raoult D. Bratislava, Publishing house of the Slovak Academy of Sciences
    • Uchiyama T: Role of major surface antigens of Rickettsia japonica in the attachment to host cell. In Rickettsiae and rickettsial diseases Edited by: Kazar J and Raoult D. Bratislava, Publishing house of the Slovak Academy of Sciences; 1999:182-188.
    • (1999) Rickettsiae and Rickettsial Diseases , pp. 182-188
    • Uchiyama, T.1
  • 13
    • 0025896984 scopus 로고
    • A family of clostridial and streptococcal ligand-binding proteins with conserved C-terminal repeat sequences
    • Wren BW: A family of clostridial and streptococcal ligand-binding proteins with conserved C-terminal repeat sequences. Mol Microbiol 1991, 5:797-803.
    • (1991) Mol Microbiol , vol.5 , pp. 797-803
    • Wren, B.W.1
  • 14
    • 0031827675 scopus 로고    scopus 로고
    • Phylogenetic analysis of spotted fever group rickettsiae by study of the outer surface protein rOmpA
    • Fournier PE, Roux V, Raoult D: Phylogenetic analysis of spotted fever group rickettsiae by study of the outer surface protein rOmpA. Int J Syst Bacteriol 1998, 48:839-849.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 839-849
    • Fournier, P.E.1    Roux, V.2    Raoult, D.3
  • 15
    • 0033859965 scopus 로고    scopus 로고
    • Phylogenetic analysis of members of the genus Rickettsia using the gene encoding the outer-membrane protein rOmpB (ompB)
    • Roux V, Raoult D: Phylogenetic analysis of members of the genus Rickettsia using the gene encoding the outer-membrane protein rOmpB (ompB). Int J Syst Evol Microbiol 2000, 50:1449-1455.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 1449-1455
    • Roux, V.1    Raoult, D.2
  • 16
    • 0032169654 scopus 로고    scopus 로고
    • The great escape: Structure and function of the autotransporter proteins
    • Henderson IR, Navarro-Garcia F, Nataro JP: The great escape: structure and function of the autotransporter proteins. Trends Microbiol 1998, 6:370-378.
    • (1998) Trends Microbiol , vol.6 , pp. 370-378
    • Henderson, I.R.1    Navarro-Garcia, F.2    Nataro, J.P.3
  • 17
    • 0026569711 scopus 로고
    • Evidence for proteolytic cleavage of the 120-Kilodalton outer membrane protein of Rickettsiae: Identification of an avirulent mutant deficient in processing
    • Hackstadt T, Messer R, Cieplak W, Peacock MG: Evidence for proteolytic cleavage of the 120-Kilodalton outer membrane protein of Rickettsiae : identification of an avirulent mutant deficient in processing. Infect Immun 1992, 60:159-165.
    • (1992) Infect Immun , vol.60 , pp. 159-165
    • Hackstadt, T.1    Messer, R.2    Cieplak, W.3    Peacock, M.G.4
  • 19
    • 0034921729 scopus 로고    scopus 로고
    • Phylogeny of Rickettsia spp. inferred by comparing sequences of 'gene D', which encodes an intracytoplasmic protein
    • Sekeyova Z, Roux V, Raoult D: Phylogeny of Rickettsia spp. inferred by comparing sequences of 'gene D', which encodes an intracytoplasmic protein. Int J Syst Evol Microbiol 2001, 51:1353-1360.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 1353-1360
    • Sekeyova, Z.1    Roux, V.2    Raoult, D.3
  • 20
    • 0030049798 scopus 로고    scopus 로고
    • Demonstration of a heat-stable 120-kilodalton protein of Rickettsia japonica as a spotted fever group-common antigen
    • Uchiyama T, Zhao LC, Uchida T: Demonstration of a heat-stable 120-kilodalton protein of Rickettsia japonica as a spotted fever group-common antigen. Microbiol Immunol 1996, 40:133-139.
    • (1996) Microbiol Immunol , vol.40 , pp. 133-139
    • Uchiyama, T.1    Zhao, L.C.2    Uchida, T.3
  • 21
    • 33644785303 scopus 로고    scopus 로고
    • Phylogenetic study of Rickettsia species using sequences of the autotransporter protein-encoding gene sca2
    • in press
    • Ngwamidiba M, Blanc G, Ogata H, Raoult D, Fournier PE: Phylogenetic study of Rickettsia species using sequences of the autotransporter protein-encoding gene sca2. Ann N Y Acad Sci 2005, in press:.
    • (2005) Ann N Y Acad Sci
    • Ngwamidiba, M.1    Blanc, G.2    Ogata, H.3    Raoult, D.4    Fournier, P.E.5
  • 22
    • 0030894532 scopus 로고    scopus 로고
    • Citrate synthase gene comparison, a new tool for phylogenetic analysis, and its application for the rickettsiae
    • Roux V, Rydkina E, Eremeeva M, Raoult D: Citrate synthase gene comparison, a new tool for phylogenetic analysis, and its application for the rickettsiae. Int J Syst Bact 1997, 47:252-261.
    • (1997) Int J Syst Bact , vol.47 , pp. 252-261
    • Roux, V.1    Rydkina, E.2    Eremeeva, M.3    Raoult, D.4
  • 23
    • 0029027527 scopus 로고
    • Phylogenetic analysis of the genusRickettsia by 16S rDNA sequencing
    • Roux V, Raoult D: Phylogenetic analysis of the genusRickettsia by 16S rDNA sequencing. Res Microbiol 1995, 146:385-396.
    • (1995) Res Microbiol , vol.146 , pp. 385-396
    • Roux, V.1    Raoult, D.2
  • 24
    • 0028209927 scopus 로고
    • Sequence analysis of the 190 kDa antigen encoding gene of Rickettsia conorii (Malish 7 strain)
    • Crocquet-Valdes PA, Weiss K, Walker DH: Sequence analysis of the 190 kDa antigen encoding gene of Rickettsia conorii (Malish 7 strain). Gene 1994, 140:115-119.
    • (1994) Gene , vol.140 , pp. 115-119
    • Crocquet-Valdes, P.A.1    Weiss, K.2    Walker, D.H.3
  • 25
    • 0142222533 scopus 로고    scopus 로고
    • Birth and death of orphan genes in Rickettsia
    • Amiri H, Davids W, Andersson SG: Birth and death of orphan genes in Rickettsia. Mol Biol Evol 2003, 20:1575-1587.
    • (2003) Mol Biol Evol , vol.20 , pp. 1575-1587
    • Amiri, H.1    Davids, W.2    Andersson, S.G.3
  • 26
    • 0003131737 scopus 로고    scopus 로고
    • Phylogenetic analysis and taxonomic relationships among the genus Rickettsia
    • Edited by: Raoult D and Brouqui P. Marseille, Elsevier
    • Roux V: Phylogenetic analysis and taxonomic relationships among the genus Rickettsia. In Rickettsiae and Rickettsial diseases at the turn of the third millinium Edited by: Raoult D and Brouqui P. Marseille, Elsevier; 1999:52-66.
    • (1999) Rickettsiae and Rickettsial Diseases at the Turn of the Third Millinium , pp. 52-66
    • Roux, V.1
  • 27
    • 0028906959 scopus 로고
    • Sequence evolution of the porB gene of Neisseria gonorrhoeae and Neisseria meningitidis: Evidence of positive Darwinian selection
    • Smith NH, Maynard Smith J, Spratt BG: Sequence evolution of the porB gene of Neisseria gonorrhoeae and Neisseria meningitidis : evidence of positive Darwinian selection. Mol Biol Evol 1995, 12:363-376.
    • (1995) Mol Biol Evol , vol.12 , pp. 363-376
    • Smith, N.H.1    Maynard Smith, J.2    Spratt, B.G.3
  • 28
    • 2442440750 scopus 로고    scopus 로고
    • Proteome analysis of Madrid E strain of Rickettsia prowazekii
    • Chao CC, Chelius D, Zhang T, Daggle L, Ching WM: Proteome analysis of Madrid E strain of Rickettsia prowazekii. Proteomics 2004, 4:1280-1292.
    • (2004) Proteomics , vol.4 , pp. 1280-1292
    • Chao, C.C.1    Chelius, D.2    Zhang, T.3    Daggle, L.4    Ching, W.M.5
  • 29
    • 84907133065 scopus 로고
    • Staining rickettsiae in yolk-sac cultures
    • Gimenez DF: Staining rickettsiae in yolk-sac cultures. Stain Technol 1964, 39:135-140.
    • (1964) Stain Technol , vol.39 , pp. 135-140
    • Gimenez, D.F.1
  • 30
    • 0026478536 scopus 로고
    • A rare step microbial DNA extraction method using Chelex 100 suitable for gene amplification
    • De Lamballerie X, Zandotti C, Vignoli C, Bollet C, de Micco P: A rare step microbial DNA extraction method using Chelex 100 suitable for gene amplification. Res Microbiol 1992, 143:785-790.
    • (1992) Res Microbiol , vol.143 , pp. 785-790
    • De Lamballerie, X.1    Zandotti, C.2    Vignoli, C.3    Bollet, C.4    De Micco, P.5
  • 31
    • 33644765309 scopus 로고    scopus 로고
    • SVARAP and aSVARAP: Simple tools for quantitative analysis of nucleotide and amino acid variability and primer selection for Clinical Microbiology
    • In press
    • Colson P, Tamalet C, Raoult D: SVARAP and aSVARAP: simple tools for quantitative analysis of nucleotide and amino acid variability and primer selection for Clinical Microbiology. BMC Microbiol 2006, In press:.
    • (2006) BMC Microbiol
    • Colson, P.1    Tamalet, C.2    Raoult, D.3
  • 32
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ: CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994, 22:4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 33
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • Kumar S, Tamura K, Jakobsen IB, Nei M: MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 2001, 17:1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 34
    • 0002367729 scopus 로고    scopus 로고
    • MOLPHY version 2.3: Programs for molecular phylogenetics based on maximum likelihood
    • Tokyo, Institute of Statistical Mathematics
    • Adachi J, Hasegawa M: MOLPHY version 2.3: programs for molecular phylogenetics based on maximum likelihood. In Computer Science Monographs 28 Tokyo, Institute of Statistical Mathematics; 1996.
    • (1996) Computer Science Monographs 28
    • Adachi, J.1    Hasegawa, M.2
  • 36
    • 0028069573 scopus 로고
    • Accuracies of the simple methods for estimating the bootstrap probability of a maximum-likelihood tree
    • Hasegawa M, Kishino H: Accuracies of the simple methods for estimating the bootstrap probability of a maximum-likelihood tree. Mol Biol Evol 1994, 11:142-145.
    • (1994) Mol Biol Evol , vol.11 , pp. 142-145
    • Hasegawa, M.1    Kishino, H.2
  • 37
    • 33644771616 scopus 로고    scopus 로고
    • FREQSQ: [http://www.infobiogen.fr/services/analyseq/cgi-bin/freqsq_in.pl] . 2006.
    • (2006)
  • 38
    • 0029938306 scopus 로고    scopus 로고
    • Codon usage and base composition in Rickettsia prowazekii
    • Andersson SGM, Sharp PM: Codon usage and base composition in Rickettsia prowazekii. J Mol Evol 1996, 42:525-536.
    • (1996) J Mol Evol , vol.42 , pp. 525-536
    • Andersson, S.G.M.1    Sharp, P.M.2
  • 39
    • 0034097381 scopus 로고    scopus 로고
    • Codon-substitution models for heterogeneous selection pressure at amino acid sites
    • Yang Z, Nielsen R, Goldman N, Pedersen AM: Codon-substitution models for heterogeneous selection pressure at amino acid sites. Genetics 2000, 155:431-449.
    • (2000) Genetics , vol.155 , pp. 431-449
    • Yang, Z.1    Nielsen, R.2    Goldman, N.3    Pedersen, A.M.4
  • 40
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang Z: PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci 1997, 13:555-556.
    • (1997) Comput Appl Biosci , vol.13 , pp. 555-556
    • Yang, Z.1


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