Two different global gene expression profiles in cancer cell lines established from etiologically different oral carcinomas

Oncology Reports

Volumn 14, Issue 6, 2005, Pages 1511-1517

  Ruutu, Merja ^a   Johansson, Bo ^a   Grenman, Reidar ^a   Syrjänen, Stina ^a  

^a UNIVERSITY OF TURKU   (Finland)

Author keywords

Cell lines; Gene expression; Human papillomavirus; Immortalized HPV16 gingival keratinocytes; Lichen planus; Microarray; Oral; Squamous cell carcinoma

Indexed keywords

ADULT; ARTICLE; CELL LINE; CLUSTER ANALYSIS; COMPARATIVE STUDY; DNA MICROARRAY; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; HUMAN; LICHEN PLANUS; MALE; METHODOLOGY; MIDDLE AGED; MOUTH TUMOR; PATHOLOGY; TUMOR CELL LINE; VIRUS INFECTION;

ADULT; CELL LINE, TRANSFORMED; CELL LINE, TUMOR; CLUSTER ANALYSIS; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, NEOPLASTIC; HUMANS; LICHEN PLANUS; MALE; MIDDLE AGED; MOUTH NEOPLASMS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PAPILLOMAVIRUS INFECTIONS;

EID: 33644676732     PISSN: 1021335X     EISSN: 17912431     Source Type: Journal    
DOI: 10.3892/or.14.6.1511     Document Type: Article

References (43)

1. International Agency for Research and Cancer (IARC). Monographs on the evaluation of carcinogenic risk of chemicals to human. In: Tobacco Smoking. Vol. 38. IARC, Lyon, pp273-274, 1986.
2. International Agency for Research and Cancer (IARC). Monographs on the evaluation of carcinogenic risks to human. In: Alcohol Drinking. Vol. 44. IARC, Lyon, p299, 1988.
3. Llewellyn C, Johnson N and Warnakulasuriya K: Risk factors for squamous cell carcinoma of the oral cavity in young people - a comprehensive literature review. Oral Oncol 37: 401-418, 2001. (Pubitemid 32480278)
4. WHO Collaborating Centre for oral precancerous lesions: Definition of leukoplakia and related lesions: an aid to studies on oral precancer. Oral Surg 46: 518-539, 1978.
5. Lumerman, Freeedman P and Krepel S: Oral epithelial dysplasia and the development of invasive squamous cell carcinoma. Oral Surg Oral Med Oral Pathol 79: 321-329, 1995.
6. Mignogna MD, Lo Muzio L, Lo Russo L, Fedele S, Ruoppo E and Bucci E: Clinical guidelines in early detection of oral squamous cell carcinoma arising in oral lichen planus: a 5-year experience. Oral Oncol 37: 262-267, 2001. (Pubitemid 32245850)
7. Syrjänen SM, Syrjänen KJ and Happonen RP: Human papillomavirus (HPV) DNA sequences in oral precancerous lesions and squamous cell carcinoma demonstrated by in situ hybridization. J Oral Pathol 17: 273-278, 1988.
8. Chang KC, Su IJ, Tsai ST, Shieh DB and Jin YT: Pathological features of betel quid-related oral epithelial lesions in Taiwan with special emphasis on the tumor progression and human papillomavirus association. Oncology 63: 362-369, 2002.
9. Herrero R, Castellsague X, Pawlita M, et al: IARC Multicenter Oral Cancer Study Group. Human papillomavirus and oral cancer: the International Agency for Research on Cancer multicenter study. J Natl Cancer Inst 95: 1772-1783, 2003. (Pubitemid 38008900)
10. Syrjänen K and Syrjänen S: Papillomavirus infections in human pathology. Wiley & Sons, New York, 2000.
11. Jeon GA, Lee JS, Patel V, et al: Global gene expression profiles of human head and neck squamous carcinoma cell lines. Int J Cancer 112: 249-258, 2004. (Pubitemid 39244364)
12. Warner GC, Reis PP, Jurisica I, et al: Molecular classification of oral cancer by cDNA microarrays identifies overexpressed genes correlated with nodal metastasis. Int J Cancer 110: 857-868, 2004. (Pubitemid 38758512)
13. Lansford C, Grenman R, Bier H, et al: Head and neck cancers. In: Human Cell Culture. Masters JRW and Palsson BO (eds). Vol. 2. Kluwer Academic Press, Dordrecht, pp185-255, 1999.
14. Ballo H, Koldovsky P, Hoffmann T, Balz V, Hildebrandt B, Gerharz CD and Bier H: Establishment and characterization of four cell lines derived from human head and neck squamous cell carcinomas for an autologous tumor-fibroblast in vitro model. Anticancer Res 19: 3827-3836, 1999.
15. Oda D, Bigler L, Lee P and Blanton R: HPV immortalization of human oral epithelial cells: a model for carcinogenesis. Exp Cell Res 226: 164-169, 1996. (Pubitemid 26238940)
16. Eisen MB, Spellman PT, Brown PO and Botstein D: Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci USA 95: 14863-14868, 1998. (Pubitemid 29003722)
17. Ruutu M, Peitsaro P, Johansson B and Syrjänen S: Transcriptional profiling of a human papillomavirus 33-positive squamous epithelial cell line which acquired a selective growth advantage after viral integration. Int J Cancer 100: 318-326, 2002. (Pubitemid 34728990)
18. Koch WM and McQuone S: Clinical and molecular aspects of squamous cell carcinoma of the head and neck in the nonsmoker and nondrinker. Curr Opin Oncol 9: 257-261, 1997. (Pubitemid 27290449)
19. Field JK: Genomic instability in squamous cell carcinoma of the head and neck. Anticancer Res 16: 2421-2431, 1996.
20. Finley DJ, Zhu B, Barden CB and Fahey TJ III: Discrimination of benign and malignant thyroid nodules by molecular profiling. Ann Surg 240: 425-437, 2004. (Pubitemid 39121337)
21. Sanchez-Carbayo M, Socci ND, Lozano JJ, et al: Gene discovery in bladder cancer progression using cDNA microarrays. Am J Pathol 163: 505-516, 2003. (Pubitemid 36909413)
22. Segal NH, Pavlidis P, Noble WS, et al: Classification of clear-cell sarcoma as a subtype of melanoma by genomic profiling. J Clin Oncol 21: 1775-1781, 2003. (Pubitemid 46638591)
23. Kanno T, Miyata M, Kazuta Y, Sato Y, Nishimaki T and Kasukawa R: Carbamazepine-induced systemic lupus erythematosus-like disease. Intern Med 31: 1303-1305, 1992. (Pubitemid 23044805)
24. Flier J, Boorsma DM, van Beek PJ, Nieboer C, Stoof TJ, Willemze R and Tensen CP: Differential expression of CXCR3 targeting chemokines CXCL10, CXCL9, and CXCL11 in different types of skin inflammation. J Pathol 194: 398-405, 2001. (Pubitemid 32782663)
25. Lantuejoul S, Constantin B, Drabkin H, Brambilla C, Roche J and Brambilla E: Expression of VEGF, semaphorin SEMA3F, and their common receptors neuropilins NP1 and NP2 in preinvasive bronchial lesions, lung tumours, and cell lines. J Pathol 200: 336-347, 2003 (Pubitemid 36827308)
26. Bielenberg DR, Hida Y, Shimizu A, Kaipainen A, Kreuter M, Kim CC and Klagsbrun M: Semaphorin 3F, a chemorepulsant for endothelial cells, induces a poorly vascularized, encapsulated, nonmetastatic tumor phenotype. J Clin Invest 114: 1260-1271, 2004. (Pubitemid 40385297)
27. Agarwal A, Rani M, Saha GK, Valarmathi TM, Bahadur S, Mohanti BK and Das SN: Disregulated expression of the Th2 cytokine gene in patients with intraoral squamous cell carcinoma. Immunol Invest 32: 17-30, 2003. (Pubitemid 36527847)
28. Thomas GR, Chen Z, Enamorado I, Bancroft C and Van Waes C: IL-12- and IL-2-induced tumor regression in a new murine model of oral squamous-cell carcinoma is promoted by expression of the CD80 co-stimulatory molecule and interferon-gamma. Int J Cancer 86: 368-374, 2000. (Pubitemid 30187498)
29. Miller WR, Hulme MJ, Bartlett JM, MacCallum J and Dixon JM: Changes in messenger RNA expression of protein kinase A regulatory subunit ialpha in breast cancer patients treated with tamoxifen. Clin Cancer Res 3: 2399-2404, 1997. (Pubitemid 28133161)
30. McDaid HM, Cairns MT, Atkinson RJ, McAleer S, Harkin DP, Gilmore P and Johnston PG: Increased expression of the RIalpha subunit of the cAMP-dependent protein kinase A is associated with advanced stage ovarian cancer. Br J Cancer 79: 933-939, 1999. (Pubitemid 29082129)
31. Young MRI, Montpetit M, Lozano Y, et al: Regulation of Lewis lung carcinoma invasion and metastasis by protein kinase A. Int J Cancer 61: 104-109, 1995.
32. Bradbury AW, Carter DC, Miller WR, Cho-Chung YS and Clair T: Protein kinase A (PK-A) regulatory subunit expression in colorectal cancer and related mucosa. Br J Cancer 69: 738-742, 1994. (Pubitemid 24112697)
33. Xia SJ, Shammas MA and Shmookler Reis RJ: Elevated recombination in immortal human cells is mediated by HsRAD51 recombinase. Mol Cell Biol 17: 7151-7158, 1997. (Pubitemid 27505945)
34. Richardson C, Stark JM, Ommundsen M and Jasin M: Rad51 overexpression promotes alternative double-strand break repair pathways and genome instability. Oncogene 23: 546-553, 2004. (Pubitemid 38175009)
35. Maacke H, Opitz S, Jost K, et al: Over-expression of wild-type Rad51 correlates with histological grading of invasive ductal breast cancer. Int J Cancer 88: 907-913, 2000.
36. Yanagisawa T, Urade M, Yamamoto Y and Furuyama J: Increased expression of human DNA repair genes, XRCC1, XRCC3 and RAD51, in radioresistant human KB carcinoma cell line N10. Oral Oncol 34: 524-528, 1998. (Pubitemid 28546869)
37. Raderschall E, Stout K, Freier S, Suckow V, Schweiger S and Haaf T: Elevated levels of Rad51 recombination protein in tumor cells. Cancer Res 62: 219-225, 2002. (Pubitemid 34074008)
38. Kim YC, Koh JT, Shin BA, et al: An antisense construct of full-length human RAD50 cDNA confers sensitivity to ionizing radiation and alkylating agents on human cell lines. Radiat Res 157: 19-25, 2002.
39. Sudbo J, Lippman SM, Lee JJ, et al: The influence of resection and aneuploidy on mortality in oral leukoplakia. N Engl J Med 350: 1405-1413, 2004. (Pubitemid 38419994)
40. Lee JK, Laudeman T, Kanter J, et al: GeneX Va: VBC open source microarray database and analysis software. Biotechniques 36: 634-642, 2004. (Pubitemid 38451648)
41. Jensen LJ, Lagarde J, von Mering C and Bork P: Array-Prospector: a web resource of functional associations inferred from microarray expression data. Nucleic Acids Res 32: W445-448, 2004. (Pubitemid 38997374)
42. Zimmermann P, Hirsch-Hoffmann M, Hennig L and Gruissem W: GeneVestigator. Arabidopsis microarray database and analysis toolbox. Plant Physiol 136: 2621-2632, 2004. (Pubitemid 41071302)
43. Rhodes DR, Yu J, Shanker K, et al: Oncomine: a cancer microarray database and integrated data-mining platform. Neoplasia 6: 1-6, 2004. (Pubitemid 38391943)