Effect of temperature on geminivirus-induced RNA silencing in plants

Plant Physiology

Volumn 138, Issue 4, 2005, Pages 1828-1841

  Chellappan, Padmanabhan ^a   Vanitharani, Ramachandran ^a   Ogbe, Francis ^a   Fauquet, Claude M ^a  

^a Intl Lab for Trop Agric Biotech   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENES; HIGH TEMPERATURE ENGINEERING; PLANTS (BOTANY); RNA; THERMAL EFFECTS; VIRUSES;

CASSAVA; GEMINI VIRUS; RNA SILENCING; SHORT-INTERFERING RNA;

GENETIC ENGINEERING;

GENES; GENETIC ENGINEERING; HIGH TEMPERATURE TESTS; NUCLEIC ACIDS; PLANTS; VIRUSES;

ANIMALIA; CASSAVA GEMINIVIRUS; GEMINIVIRIDAE; MANIHOT ESCULENTA; NICOTIANA BENTHAMIANA; RNA VIRUSES;

PLANT RNA; SMALL INTERFERING RNA; VIRUS RNA;

ARTICLE; CASSAVA; GEMINIVIRUS; GENE EXPRESSION REGULATION; GENE SILENCING; METABOLISM; PHYSIOLOGY; PLANT DISEASE; TEMPERATURE; TIME; TOBACCO; VIROLOGY;

GEMINIVIRIDAE; GENE EXPRESSION REGULATION, PLANT; GENE SILENCING; MANIHOT; PLANT DISEASES; RNA, PLANT; RNA, SMALL INTERFERING; RNA, VIRAL; TEMPERATURE; TIME FACTORS; TOBACCO;

EID: 33344462503     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.105.066563     Document Type: Article

References (44)

1. Anandalakshmi R, Pruss GJ, Ge X, Marathe R, Mallory AC, Smith TH, Vance VB (1998) A viral suppressor of gene silencing in plants. Proc Natl Acad Sci USA 95: 13079-13084
2. Baulcombe D (2004) RNA silencing in plants. Nature 431: 356-363
3. Bernstein E, Caudy AA, Hammond SM, Hannon GJ (2001) Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409: 363-366
4. Chapman EJ, Prokhnevsky AI, Gopinath K, Dolja VV, Carrington JC (2004) Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step. Genes Dev 18: 1179-1186
5. Chellappan P, Masona MV, Vanitharani R, Taylor NJ, Fauquet CM (2004b) Bread spectrum resistance to ssDNA viruses associated with transgene-induced gene silencing in cassava. Plant Mol Biol 56: 601-611
6. Chellappan P, Vanitharani R, Fauquet CM (2004a) Short-interfering RNA accumulation correlates with host recovery in DNA virus infected hosts and gene silencing targets specific viral sequences. J Virol 78: 7465-7477
7. Chellappan P, Vanitharani R, Fauquet CM (2005) MicroRNA-binding viral protein interferes with Arabidopsis development. Proc Natl Acad Sci USA 102: 10381-10386
8. Cogoni C, Macino G (1997) Isolation of quelling-defective (qde) mutants impaired in posttranscriptional transgene-induced gene silencing in Neurospora crassa. Proc Natl Acad Sci USA 94: 10233-10238
9. Dalmay T, Hamilton A, Rudd S, Angell S, Baulcombe DC (2000) AnRNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus. Cell 101: 543-553
10. Fauquet CM, Stanley J (2003) Geminivirus classification and nomenclature; progress and problems. Ann Appl Biol 142: 165-189
11. Finnegan EJ, Margis R, Waterhouse PM (2003) Posttranscriptional gene silencing is not compromised in the Arabidopsis CARPEL FACTORY (DICER-LIKE1) mutant a homolog of Dicer-1 from Drosophila. Curr Biol 13: 236-240
12. Fire A, Xu S, Montgomery MK, Kostas SA, Driver SE, Mello CC (1998) Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391: 806-811
13. Fondong VN, Pita JS, Rey ME, de Kochko A, Beachy RN, Fauquet CM (2000) Evidence of synergism between African cassava mosaic virus and a new double-recombinant geminivirus infecting cassava in Cameroon. J Gen Virol 81: 287-297
14. Gerik JS, Duffus JE, Perry R, Stenger DC, Van Maren AF (1990) Etiology of tomato plant decline in the California desert. Phytopathology 80: 1352-1356
15. Hamilton AJ, Baulcombe DC (1999) A species of small antisense RNA in posttranscriptional gene silencing in plants. Science 286: 950-952
16. Harrison BD (1956) Studies on the effect of temperature on virus multiplication in inoculated leaves. Ann Appl Biol 44: 215-226
17. Havelda Z, Hornyik C, Valoczi A, Burgyan J (2005) Defective interfering RNA hinders the activity of a tombus virus-encoded posttranscriptional gene silencing suppressor. J Virol 79: 450-457
18. Hine RB, Osborne WE, Dennis RE (1970) Elevation and temperature effects on severity of maize virus in sorghum in Arizona. Plant Dis Rep 54: 1064-1068
19. Johnson J (1922) The relation of air temperature to the mosaic disease of potatoes and other plants. Phytopathology 12: 438-440
20. Khvorova A, Reynolds A, Jayasena SD (2003) Functional siRNAs and miRNAs exhibit strand bias. Cell 115: 209-216
21. Laufs J, Traut W, Heyraud F, Matzeit V, Rogers SG, Schell J, Gronenborn B (1995) In vitro cleavage and joining at the viral origin of replication by the replication initiator protein of tomato yellow leaf curl virus. Proc Natl Acad Sci USA 92: 3879-3883
22. Legg JP, Fauquet CM (2004) Cassava mosaic geminiviruses in Africa. Plant Mol Biol 56: 585-599
23. Lucioli A, Noris E, Brunetti A, Tavazza R, Ruzza V, Castillo AG, Bejarano ER, Accotto GP, Tavazza M (2003) Tomato yellow leaf curl Sardinia virus rep-derived resistance to homologous and heterologous gemini-viruses occurs by different mechanisms and is overcome if virus-mediated transgene silencing is activated. J Virol 77: 6785-6798
24. Manganaris GA, Economou AS, Boubourakas IN, Katis NI (2003) Elimination of PPV and PNRSV through thermotherapy and meristem-tip culture in nectarine. Plant Cell Rep 22: 195-200
25. Mansoor M, Briddon RW, Zafar Y, Stanley J (2003) Geminivirus disease complexes; an emerging threat. Trends Plant Sci 8: 128-134
26. Muangsan N, Beclin C, Vaucheret H, Robertson D (2004) Geminivirus VIGS of endogenous genes requires SGS2/SDE1 and SGS3 and defines a new branch in the genetic pathway for silencing in plants. Plant J 38: 1004-1014
27. Napoli C, Lemieux C, Jorgensen R (1990) Introduction of a chimeric chalcone synthase gene into petunia results in reversible co-suppression of homologous genes intrans. Plant Cell 2: 279-289
28. Pita JS, Fondong VN, Sangare A, Otim-Nape GW, Ogwal S, Fauquet CM (2001) Recombination, pseudorecombination and synergism of gemini-viruses are determinant keys to the epidemic of severe cassava mosaic disease in Uganda. J Gen Virol 82: 655-665
29. Ratcliff F, Harrison BD, Baulcombe DC (1997) A similarity between viral defense and gene silencing in plants. Science 276: 1558-1560
30. Roth BM, Pruss GJ, Vance VB (2004) Plant viral suppressors of RNA silencing. Virus Res 102: 97-108
31. Saunders K, Salim N, Mali VR, Malathi VG, Briddon R, Markham PG, Stanley J (2002) Characterisation of Sri Lankan cassava mosaic virus and Indian cassava mosaic virus: evidence for acquisition of a DNA B component by a monopartite begomovirus. Virology 293: 63-74
32. Schauer SE, Jacobsen SE, Meinke DW, Ray A (2002) DICER-LIKE1: blind men and elephants in Arabidopsis development. Trends Plant Sci 7: 487-491
33. Silhavy D, Molnar A, Lucioli A, Szittya G, Hornyik C, Tavazza M, Burgyan J (2002) A viral protein suppresses RNA silencing and binds silencing-generated, 21- to 25-nucleotide double-stranded RNAs. EMBO J 21: 3070-3080
34. Szittya G, Silhavy D, Molnar A, Havelda Z, Lovas A, Lakatos L, Banfalvi Z, Burgyan J (2003) Low temperature inhibits RNA silencing-mediated defence by the control of siRNA generation. EMBO J 22: 633-640
35. Timmermans MCP, Das OP, Messing J (1994) Gemini viruses and their uses as extrachromosomal replicons. Annu Rev Plant Physiol Plant Mol Biol 45: 79-112
36. Tumari Y, Matranga C, Haley B, Martinez N, Zamore PD (2004) A protein sensor for siRNA asymmetry. Science 306: 1377-1380
37. Townsend R, Stanley J, Curson SJ, Short MN (1985) Major polyadenylated transcripts of cassava latent virus and location of the gene encoding coat protein. EMBO J 4: 33-37
38. Vance V, Vaucheret H (2001) RNA silencing in plants-defense and counterdefense. Science 292: 2277-2280
39. Vanitharani R, Chellappan P, Fauquet CM (2003) Short interfering RNA-mediated interference of gene expression and viral DNA accumulation in cultured plant cells. Proc Natl Acad Sci USA 100: 9632-9636
40. Vanitharani R, Chellappan P, Fauquet CM (2005) Geminiviruses and RNA silencing. Trends Plant Sci 10: 144-151
41. Vanitharani R, Chellappan P, Pita JS, Fauquet CM (2004) Differential roles of AC2 and AC4 of cassava geminiviruses in mediating synergism and posttranscriptional gene silencing suppression. J Virol 78: 9487-9498
42. Waterhouse PM, Wang M, Lough T (2001) Gene silencing as an adaptive defence against viruses. Nature 411: 834-842
43. Xie Z, Johansen LK, Gustafson AM, Kasschau KD, Lellis AD, Zilberman D, Jacobsen SE, Carrington JC (2004) Genetic and functional diversification of small RNA pathways in plants. PLoS Biol 2: 1-11
44. Yang SJ, Carter SA, Cole AB, Cheng NH, Nelson RS (2004) A natural variant of a host RNA-dependent RNA polymerase is associated with increased susceptibility to viruses by Nicotiana benthamiana. Proc Natl Acad Sci USA 101: 6297-6302