Chryseobacterium soldanellicola sp. nov. and Chryseobacterium taeanense sp. nov., isolated from roots of sand-dune plants

International Journal of Systematic and Evolutionary Microbiology

Volumn 56, Issue 2, 2006, Pages 433-438

  Park, Myung Soo ^a   Jung, Se Ra ^a   Lee, Kang Hyun ^a   Lee, Myung Sook ^a   Do, Jin Ok ^a   Kim, Seung Bum ^b   Bae, Kyung Sook ^a  

^a Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^b Chungnam National University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; FATTY ACID; MYRISTIC ACID DERIVATIVE; PALMITIC ACID DERIVATIVE; RNA 16S;

ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATION; CHEMOTAXONOMY; CHRYSEOBACTERIUM; CHRYSEOBACTERIUM SOLDANELLICOLA; CHRYSEOBACTERIUM TAEANENSE; FLAVOBACTERIACEAE; GENE SEQUENCE; GRAM NEGATIVE BACTERIUM; KOREA; NEW GENUS; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PLANT ROOT; PRIORITY JOURNAL; SEASHORE; SPECIES DIFFERENCE;

BACTERIAL TYPING TECHNIQUES; CALYSTEGIA; CHRYSEOBACTERIUM; DNA, BACTERIAL; DNA, RIBOSOMAL; ECOSYSTEM; ELYMUS; FATTY ACIDS; GENES, RRNA; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHENOTYPE; PLANT ROOTS; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SILICON DIOXIDE; SOIL MICROBIOLOGY;

BACTERIA (MICROORGANISMS); CHRYSEOBACTERIUM; CHRYSEOBACTERIUM INDOLTHETICUM; FLAVOBACTERIACEAE; NEGIBACTERIA;

EID: 33244492855     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.63825-0     Document Type: Article

References (21)

1. Bernardet, J.-F., Hugo, C. & Bruun, B. (2001). The genus Chryseobacterium. In The Prokaryotes: an Evolving Electronic Resource for the Microbiological Community, 3rd edn, release 3.7. Edited by M. Dworkin et al. New York: Springer. http://link.springer-ny.com/link/service/books/10125/
2. de Beer, H. D., Hugo, C. J., Jooste, P. J., Willems, A., Vancanneyt, M., Coenye, T. & Vandamme, P. (2005). Chryseobacterium vrystaatense sp. nov., isolated from raw chicken in a chicken processing plant. Int J Syst Evol Microbiol 55, 2149-2153.
3. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
4. Gerhardt, P., Murray, R. G. E, Wood, W. A. & Krieg, N. R. (1994). Methods for General and Molecular Bacteriology. Washington, DC: American Society for Microbiology.
5. Han, S. K., Nedashkovskaya, O. I., Mikhailov, V. V., Kim, S. B. & Bae, K. S. (2003). Salinibacterium amurskyense gen. nov., sp. nov., a novel genus of the family Microbacteriaceae from the marine environment. Int J Syst Evol Microbiol 53, 2061-2066.
6. Hugo, C. J., Segers, P., Hoste, B., Vancanneyt, M. & Kersters, K. (2003). Chryseobacterium joostei sp. nov., isolated from the dairy environment. Int J Syst Evol Microbiol 53, 771-777.
7. Kämpfer, P., Dreyer, U., Neef, A., Dott, W. & Busse, H.-J. (2003). Chryseobacterium defluvii sp. nov., isolated from wastewater. Int J Syst Evol Microbiol 53, 93-97.
8. Kim, K. K., Bae, H. S., Schumann, P. & Lee, S. T. (2005). Chryseobacterium daecheongense sp. nov., isolated from freshwater lake sediment. Int J Syst Evol Microbiol 55, 133-138.
9. Kim, K. K., Kim, M.-K., Lim, J. H., Park, H. Y. & Lee, S. T. (2005). Transfer of Chryseobacterium meningosepticum and Chryseobacterium miricola to Elizabethkingia gen. nov. as Elizabethkingia meningoseptica comb. nov. and Elizabethkingia miricola comb. nov. Int J Syst Evol Microbiol 55, 1287-1293.
10. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
11. Li, Y., Kawamura, K., Fujiwara, N., Naka, T., Liu, H., Huang, X., Kobayashi, K. & Ezaki, T. (2003). Chryseobacterium miricola sp. nov., a novel species isolated from condensation water of space station Mir. Syst Appl Microbiol 26, 523-528.
12. Lim, Y. W., Baik, K. S., Han, S. K., Kim, S. B. & Bae, K. S. (2003). Burkholderia sordidicola sp. nov., isolated from the white-rot fungus Phanerochaete sordida. Int J Syst Evol Microbiol 53, 1631-1636.
13. McSpadden Gardener, B. B. & Weller, D. M. (2001). Changes in populations of rhizosphere bacteria associated with take-all disease of wheat. Appl Environ Microbiol 67, 4414-4425.
14. Mudarris, M., Austin, B., Segers, P., Vancanneyt, M., Hoste, B. & Bernardet, J. F. (1994). Flavobacterium scophthalmum sp. nov., a pathogen of turbot (Scophthalmus maximus L.). Int J Syst Bacteriol 44, 447-453.
15. Park, M. S., Jung, S. R., Lee, M. S., Kim, K. O., Do, J. O., Lee, K. H., Kim, S. B. & Bae, K. S. (2005). Isolation and characterization of bacteria associated with two sand dune plant species, Calystegia soldanella and Elymus mollis. J Microbiol 43, 219-227.
16. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
17. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. MIDI Technical Note 101. Newark, DE: MIDI Inc.
18. Shen, F. T., Kämpfer, P., Young, C. C., Lai, W. A. & Arun, A. B. (2005). Chryseobacterium taichungense sp. nov., isolated from contaminated soil. Int J Syst Evol Microbiol 55, 1301-1304.
19. Shimomura, K., Kaji, S. & Hiraishi, A. (2005). Chryseobacterium shigense sp. nov., a yellow-pigmented, aerobic bacterium isolated from a lactic acid beverage. Int J Syst Evol Microbiol 55, 1903-1906.
20. Vandamme, P., Bernardet, J.-F., Segers, P., Kersters, K. & Holmes, B. (1994). New perspectives in the classification of the flavobacteria: description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter nom. rev. Int J Syst Bacteriol 44, 827-831.
21. Young, C. C., Kämpfer, P., Shen, F. T., Lai, W. A. & Arun, A. B. (2005). Chryseobacterium formosense sp. nov., isolated from the rhizosphere of Lactuca sativa L. (garden lettuce). Int J Syst Evol Microbiol 55, 423-426.