The pro-opiomelanocortin genes in rainbow trout (Oncorhynchus mykiss): Duplications, splice variants, and differential expression

Journal of Endocrinology

Volumn 188, Issue 2, 2006, Pages 355-363

  Leder, E H ^a   Silverstein, J T ^a  

^a NATIONAL CENTER FOR COOL AND COLD WATER AQUACULTURE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID DERIVATIVE; PROOPIOMELANOCORTIN;

ANIMAL FOOD; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; FEMALE; FOOD DEPRIVATION; GENE DELETION; GENE DUPLICATION; GENE EXPRESSION; GENE FUNCTION; GENETIC IDENTIFICATION; GENETIC TRANSCRIPTION; GENETIC VARIABILITY; HYPOPHYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; RAINBOW TROUT; REAL TIME POLYMERASE CHAIN REACTION; SALMONID; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; TELEOST;

AMINO ACID SEQUENCE; AMINO ACIDS; ANIMALS; BASE SEQUENCE; DNA, RECOMBINANT; GENE DUPLICATION; GENE EXPRESSION REGULATION; GENE LIBRARY; HYPOTHALAMUS; ONCORHYNCHUS MYKISS; PHYLOGENY; PITUITARY GLAND; POLYMERASE CHAIN REACTION; PRO-OPIOMELANOCORTIN; RNA, MESSENGER; SEQUENCE ALIGNMENT; TRANSCRIPTION, GENETIC;

EID: 33244485486     PISSN: 00220795     EISSN: None     Source Type: Journal    
DOI: 10.1677/joe.1.06283     Document Type: Article

References (31)

1. Amemiya Y, Takahashi A, Meguro H & Kawauchi H 1999a Molecular cloning of lungfish proopiomelanocortin cDNA. General and Comparative Endocrinology 115 415-421.
2. Amemiya Y, Takahashi A, Suzuki N, Sasayama Y & Kawauchi H 1999b A newly characterized melanotropin in proopiomelanocortin in pituitaries of an elasmobranch, Squalus acanthias. General and Comparative Endocrinology 114 387-395.
3. Arends RJ, Vermeer H, Martens GJ, Leunissen JA, Wendelaar Bonga SE & Flik G 1998 Cloning and expression of two proopiomelanocortin mRNAs in the common carp (Cyprinus carpio L.). Molecular and Cellular Endocrinology 143 23-31.
4. Banks WA, Kastin AJ, Huang W, Jaspan JB & Maness LM 1996 Leptin enters the brain by a saturable system independent of insulin. Peptides 17 305-311.
5. Cheung CC, Clifton DK & Steiner RA 1997 Proopiomelanocortin neurons are direct targets for leptin in the hypothalamus. Endocrinology 138 4489-4492.
6. Civelli O, Birnberg N & Herbert E 1982 Detection and quantitation of pro-opiomelanocortin mRNA in pituitary and brain tissues from different species. Journal of Biological Chemistry 257 6783-6787.
7. Coon SL, Begay V, Deurloo D, Falcon J & Klein DC 1999 Two arylalkylamine N-acetyltransferase genes mediate melatonin synthesis in fish. Journal of Biological Chemistry 274 9076-9082.
8. Corpet F 1988 Multiple sequence alignment with hierarchical clustering. Nucleic Acids Research 16 10881-10890.
9. Elias CF, Lee C, Kelly J, Aschkenasi C, Ahima RS, Couceyro PR, Kuhar MJ, Saper CB & Ehnquist JK 1998 Leptin activates hypothalamic CART neurons projecting to the spinal cord. Neuron 21 1375-1385.
10. Friedman JM & Halaas JL 1998 Leptin and the regulation of body weight in mammals. Nature 395 763-770.
11. Gabillard JC, Duval H, Canty C, Rescan PY, Weil C & Le Bail PY 2003 Differential expression of the two GH genes during embryonic development of rainbow trout Oncorhynchus mykiss in relation with the IGFs system. Molecular Reproduction and Development 64 32-40.
12. Gonzalez-Nunez V, Gonzalez-Sarmiento R & Rodriguez RE 2003 Identification of two proopiomelanocortin genes in zebrafish (Danio rerio). Brain Research: Molecular Brain Research 120 1-8.
13. Jaillon O, Aury JM, Brunet F, Petit JL, Stange-Thomann N, Mauceli E, Bouneau L, Fischer C, Ozouf-Costaz C, Bernot A et al. 2004 Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature 431 946-957.
14. Karsi A, Waldbieser GC, Small BC, Liu Z & Wolters WR 2004 Molecular cloning of proopiomelanocortin cDNA and multi-tissue mRNA expression in channel catfish. General and Comparative Endocrinology 137 312-321.
15. Kitahara N, Nishizawa T, Iida K, Okazaki H, Andoh T & Soma GI 1988 Absence of a gamma-melanocyte-stimulating hormone sequence in proopiomelanocortin mRNA of chum salmon Oncorhynchus keta. Comparative Biochemistry and Physiology B, Comparative Biochemistry 91 365-370.
16. Lee J, Danielson P, Sollars C, Alrubaian J, Balm P & Dores RM 1999 Cloning of a neoteleost (Oreochromis mossambicus) pro-opiomelanocortin (POMC) cDNA reveals a deletion of the gamma-melanotropin region and most of the joining peptide region: implications for POMC processing. Peptides 20 1391-1399.
17. Nadeau JH & Sankoff D 1997 Comparable rates of gene loss and functional divergence after genome duplications early in vertebrate evolution. Genetics 147 1259-1266.
18. Nakanishi S, Inoue A, Kita T, Nakamura M, Chang AC, Cohen SN & Numa S 1979 Nucleotide sequence of cloned cDNA for bovine corticotropin-beta-lipotropin precursor. Nature 278 423-427.
19. Prince VE & Pickett FB 2002 Splitting pairs: the diverging fates of duplicated genes. Nature Reviews: Genetics 3 827-837.
20. Ramos-Payan R, Aguilar-Medina M, Estrada-Parra S, Gonzalez YMJA, Favila-Castillo L, Monroy-Ostria A & Estrada-Garcia IC 2003 Quantification of cytokine gene expression using an economical real-time polymerase chain reaction method based on SYBR Green I. Scandinavian Journal of Immunology 57 439-445.
21. Rexroad CE 3rd, Lee Y, Keele JW, Karamycheva S, Brown G, Koop B, Gahr SA, Palti Y & Quackenbush J 2003 Sequence analysis of a rainbow trout cDNA library and creation of a gene index. Cytogenetic and Genome Research 102 347-354.
22. Saitou N & Nei M 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4 406-425.
23. Salbert G, Chauveau I, Bonnec G, Valotaire Y & Jego P 1992 One of the two trout proopiomelanocortin messenger RNAs potentially encodes new peptides. Molecular Endocrinology 6 1605-1613.
24. Schwartz MW, Woods SC, Porte D Jr, Seeley RJ & Baskin DG 2000 Central nervous system control of food intake. Nature 404 661-671.
25. Smith AI & Funder JW 1988 Proopiomelanocortin processing in the pituitary, central nervous system, and peripheral tissues. Endocrine Reviews 9 159-179.
26. Swofford DL 1998 PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods), version 4. Sunderland, Massachusetts: Sinauer Associates.
27. Takahashi A, Amemiya Y, Sarashi M, Sower SA & Kawauchi H 1995 Melanotropin and corticotropin are encoded on two distinct genes in the lamprey, the earliest evolved extant vertebrate. Biochemical and Biophysical Research Communications 213 490-498.
28. Takahashi A, Amano M, Itoh T, Yasuda A, Yamanome T, Amemiya Y, Sasaki K, Sakai M, Yamamori K & Kawauchi H 2005 Nucleotide sequence and expression of three subtypes of proopiomelanocortin mRNA in barfin flounder. General and Comparative Endocrinology 141 291-303.
29. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F & Higgins DG 1997 The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 25 4876-4882.
30. Varsamos S, Wendelaar Bonga SE, Flik G, Quere R & Commes T 2003 Cloning of a proopiomelanocortin cDNA from the pituitary gland of the sea bass (Dicentrarchus labrax) and assessment of mRNA expression in different tissues by means of real-time PCR. Journal of Endocrinology 176 405-414.
31. Volkoff H, Canosa LF, Unniappan S, Cerda-Reverter JM, Bernier NJ, Kelly SP & Peter RE 2005 Neuropeptides and the control of food intake in fish. General and Comparative Endocrinology 142 3-19.