Roseibacterium elongatum gen. nov., sp. nov., an aerobic, bacteriochlorophyll-containing bacterium isolated from the west coast of Australia

International Journal of Systematic and Evolutionary Microbiology

Volumn 56, Issue 2, 2006, Pages 417-421

  Suzuki, Tomonori ^a   Mori, Youichirou ^a   Nishimura, Yukimasa ^a  

^a TOKYO UNIVERSITY OF SCIENCE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIOCHLOROPHYLL A; CATALASE; CYTOSINE; FATTY ACID; GUANINE; OXIDOREDUCTASE; RNA 16S; STEARIC ACID; UREASE;

AEROBIC BACTERIA; ALPHAPROTEOBACTERIA; ARTICLE; AUSTRALIA; BACTERIAL CELL; BACTERIAL STRAIN; BACTERIUM ISOLATION; DNA CONTENT; GRAM NEGATIVE BACTERIUM; NEW GENUS; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHOTOTROPHIC BACTERIUM; PRIORITY JOURNAL; RNA SEQUENCE; ROSEIBACTERIUM ELONGATUM; SEASHORE; SEQUENCE HOMOLOGY;

AEROBIOSIS; BACTERIOCHLOROPHYLL A; BASE COMPOSITION; DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; GENES, RRNA; GEOLOGIC SEDIMENTS; MOLECULAR SEQUENCE DATA; PHYLOGENY; RHODOBACTERACEAE; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; WESTERN AUSTRALIA;

ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); CHONDRICHTHYES; NEGIBACTERIA; PHOTOBACTERIA; RHODOVULUM SULFIDOPHILUM; ROSEIBACTERIUM; ROSEIBACTERIUM ELONGATUM;

EID: 33244460824     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.02094-0     Document Type: Article

References (24)

1. Felsenstein, J. (1995). PHYLIP (phylogeny inference package), version 3.57c. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
2. Fuerst, J. A., Hawkins, J. A., Holmes, A., Sly, L. I., Moore, C. J. & Stackebrandt, E. (1993). Porphyrobacter neustonensis gen. nov., sp. nov., an aerobic bacteriochlorophyll-synthesizing budding bacterium from fresh water. Int J Syst Bacteriol 43, 125-134.
3. Hiraishi, A., Matsuzawa, Y., Kanbe, T. & Wakao, N. (2000). Acidisphaera rubrifaciens gen. nov., sp. nov., an aerobic bacteriochlorophyll-containing bacterium isolated from acidic environments. Int J Syst Evol Microbiol 50, 1539-1546.
4. Hirsch, P. (1974). Budding bacteria. Annu Rev Microbiol 28, 391-444.
5. Katayama-Fujimura, Y., Komatsu, Y., Kuraishi, H. & Kaneko, T. (1984). Estimation of DNA base composition by high performance liquid chromatography of its nuclease P1 hydrolysate. Agric Biol Chem 48, 3169-3172.
6. Labrenz, M., Collins, M. D., Lawson, P. A., Tindall, B. J., Schumann, P. & Hirsch, P. (1999). Roseovarius tolerans gen. nov., sp. nov., a budding bacterium with variable bacteriochlorophyll a production from hypersaline Ekho Lake. Int J Syst Bacteriol 49, 137-147.
7. Labrenz, M., Tindall, B. J., Lawson, P. A., Collins, M. D., Schumann, P. & Hirsch, P. (2000). Staleya guttiformis gen. nov., sp. nov. and Sulfitobacter brevis sp. nov., α-3-Proteobacteria from hypersaline, heliothermal and meromictic antarctic Ekho Lake. Int J Syst Evol Microbiol 50, 303-313.
8. Lemos, M. L., Toranzo, A. E. & Barja, J. L. (1985). Modified medium for the oxidation-fermentation test in the identification of marine bacteria. Appl Environ Microbiol 49, 1541-1543.
9. Nishimura, Y., Muroga, Y., Saito, S., Shiba, T., Takamiya, K. & Shioi, Y. (1994). DNA relatedness and chemotaxonomic feature of aerobic bacteriochlorophyll-containing bacteria isolated from coasts of Australia. J Gen Appl Microbiol 40, 287-296.
10. Saitoh, S., Suzuki, T. & Nishimura, Y. (1998). Proposal of Craurococcus roseus gen. nov., sp. nov. and Paracraurococcus ruber gen. nov., sp. nov., novel aerobic bacteriochlorophyll a-containing bacteria from soil. Int J Syst Bacteriol 48, 1043-1047.
11. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
12. Sato, K. (1978). Bacteriochlorophyll formation by facultative methylotrophs, Protaminobacter ruber and Pseudomonas AM 1. FEBS Lett 85, 207-210.
13. Shiba, T. & Simidu, U. (1982). Erythrobacter longus gen. nov., sp. nov., an aerobic bacterium which contains bacteriochlorophyll a. Int J Syst Bacteriol 32, 211-217.
14. Shiba, T., Shioi, Y., Takamiya, K., Sutton, D. C. & Wilkinson, C. R. (1991). Distribution and physiology of aerobic bacteria containing bacteriochlorophyll a on the east and west coasts of Australia. Appl Environ Microbiol 57, 295-300.
15. Sorokin, D. Y., Tourova, T. P., Kuznetsov, B. B., Bryantseva, I. A. & Gorlenko, V. M. (2000). Roseinatronobacter thiooxidans gen. nov., sp. nov., a new alkaliphilic aerobic bacteriochlorophyll a-containing bacterium isolated from a soda lake. Microbiology (English translation of Mikrobiologiia) 69, 75-82.
16. Suyama, T., Shigematsu, T., Takaichi, S., Nodasaka, Y., Fujikawa, S., Hosoya, H., Tokiwa, Y., Kanagawa, T. & Hanada, S. (1999). Roseateles depolymerans gen. nov., sp. nov., a new bacteriochlorophyll a-containing obligate aerobe belonging to the β-subclass of the Proteobacteria. Int J Syst Bacteriol 49, 449-457.
17. Suzuki, T. & Yamasato, K. (1994). Phylogeny of spore-forming lactic acid bacteria based on 16S rRNA gene sequences. FEMS Microbiol Lett 115, 13-18.
18. Suzuki, T., Muroga, Y., Takahama, M., Shiba, T. & Nishimura, Y. (1999a). Rubrimonas cliftonensis gen. nov., sp. nov., an aerobic bacteriochlorophyll-containing bacterium isolated from a saline lake. Int J Syst Bacteriol 49, 201-205.
19. Suzuki, T., Muroga, Y., Takahama, M. & Nishimura, Y. (1999b). Roseivivax halodurans gen. nov., sp. nov. and Roseivivax halotolerans sp. nov., aerobic bacteriochlorophyll-containing bacteria isolated from a saline lake. Int J Syst Bacteriol 49, 629-634.
20. Suzuki, T., Muroga, Y., Takahama, M. & Nishimura, Y. (2000). Roseibium denhamense gen. nov., sp. nov. and Roseibium hamelinense sp. nov., aerobic bacteriochlorophyll-containing bacteria isolated from the east and west coasts of Australia. Int J Syst Evol Microbiol 50, 2151-2156.
21. Taga, N. (1968). Some ecological aspects of marine bacteria in the Kuroshio current. Bull Misaki Mar Biol Inst Kyoto Univ 12, 56-76.
22. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
23. Yurkov, V. V. & Beatty, J. T. (1998). Aerobic anoxygenic phototrophic bacteria. Microbiol Mol Biol Rev 62, 695-724.
24. Yurkov, V. V., Krieger, S., Stackebrandt, E. & Beatty, J. T. (1999). Citromicrobium bathyomarinum, a novel aerobic bacterium isolated from deep-sea hydrothermal vent plume waters that contains photosynthetic pigment-protein complexes. J Bacteriol 181, 4517-4525.