-
1
-
-
0036640350
-
Origin and fate of repeats in bacteria
-
Achaz, G., E. P. C. Rocha, P. Netter, and E. Coissac. 2002. Origin and fate of repeats in bacteria. Nucleic Acids Res. 30:2987-2994.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 2987-2994
-
-
Achaz, G.1
Rocha, E.P.C.2
Netter, P.3
Coissac, E.4
-
2
-
-
10944235924
-
Comparative genomic structure of prokaryotes
-
Bentley, S. D., and J. Parkhill. 2004. Comparative genomic structure of prokaryotes. Annu. Rev. Genet. 38:771-791.
-
(2004)
Annu. Rev. Genet.
, vol.38
, pp. 771-791
-
-
Bentley, S.D.1
Parkhill, J.2
-
3
-
-
0031963154
-
Distribution of chromosome length variation in natural isolates of Escherichia coli
-
Bergthorsson, U., and H. Ochman. 1998. Distribution of chromosome length variation in natural isolates of Escherichia coli. Mol. Biol. Evol. 15:6-16.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 6-16
-
-
Bergthorsson, U.1
Ochman, H.2
-
4
-
-
0942279509
-
Chromosomal constraints in Gram-positive bacteria revealed by artificial inversions
-
Campo, N., M. J. Dias, M. L. Daveran-Mingot, P. Ritzenthaler, and P. Le Bourgeois. 2004. Chromosomal constraints in Gram-positive bacteria revealed by artificial inversions. Mol. Microbiol. 52:511-522.
-
(2004)
Mol. Microbiol.
, vol.52
, pp. 511-522
-
-
Campo, N.1
Dias, M.J.2
Daveran-Mingot, M.L.3
Ritzenthaler, P.4
Le Bourgeois, P.5
-
5
-
-
0028865551
-
Two heterocyst-specific DNA rearrangements of nif operons in Anabaena cylindrica and Nostoc sp. strain Mac
-
Carrasco, C. D., and J. W. Golden. 1995. Two heterocyst-specific DNA rearrangements of nif operons in Anabaena cylindrica and Nostoc sp. strain Mac. Microbiology 141:2479-2487.
-
(1995)
Microbiology
, vol.141
, pp. 2479-2487
-
-
Carrasco, C.D.1
Golden, J.W.2
-
6
-
-
4644293305
-
Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis
-
USA
-
Chain, P. S., E. Carniel, F. W. Larimer et al. (23 co-authors). 2004. Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis. Proc. Natl. Acad. Sci USA 101:13826-13831.
-
(2004)
Proc. Natl. Acad. Sci
, vol.101
, pp. 13826-13831
-
-
Chain, P.S.1
Carniel, E.2
Larimer, F.W.3
-
7
-
-
0016792854
-
The effect of gene concentration and relative gene dosage on gene output in Escherichia coli
-
Chandler, M. G., and R. H. Pritchard. 1975. The effect of gene concentration and relative gene dosage on gene output in Escherichia coli. Mol. Gen. Genet. 138:127-141.
-
(1975)
Mol. Gen. Genet.
, vol.138
, pp. 127-141
-
-
Chandler, M.G.1
Pritchard, R.H.2
-
8
-
-
0042073066
-
Loss of DNA recombinational repair enzymes in the initial stages of genome degeneration
-
Dale, C., B. Wang, N. Moran, and H. Ochman. 2003. Loss of DNA recombinational repair enzymes in the initial stages of genome degeneration. Mol. Biol. Evol. 20:1188-1194.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 1188-1194
-
-
Dale, C.1
Wang, B.2
Moran, N.3
Ochman, H.4
-
9
-
-
0036306989
-
Analysis of the cellular functions of Escherichia coli operons and their conservation in Bacillus subtilis
-
de Daruvar, A., J. Collado-Vides, and A. Valencia. 2002. Analysis of the cellular functions of Escherichia coli operons and their conservation in Bacillus subtilis. J. Mol. Evol. 55:211-221.
-
(2002)
J. Mol. Evol.
, vol.55
, pp. 211-221
-
-
De Daruvar, A.1
Collado-Vides, J.2
Valencia, A.3
-
10
-
-
0028817745
-
The physical map of the chromosome of a serogroup A strain of Neisseria meningitidis shows complex rearrangements relative to the chromosomes of the two mapped strains of the closely related species N. gonorrhoeae
-
Dempsey, J. A., A. B. Wallace, and J. G. Cannon. 1995. The physical map of the chromosome of a serogroup A strain of Neisseria meningitidis shows complex rearrangements relative to the chromosomes of the two mapped strains of the closely related species N. gonorrhoeae. J. Bacteriol. 177:6390-6400.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 6390-6400
-
-
Dempsey, J.A.1
Wallace, A.B.2
Cannon, J.G.3
-
11
-
-
0036330894
-
Genome sequence of Yersinia pestis KIM
-
Deng, W., V. Burland, G. Plunkett III et al. (20 co-authors). 2002. Genome sequence of Yersinia pestis KIM. J. Bacteriol. 184:4601-4611.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 4601-4611
-
-
Deng, W.1
Burland, V.2
Plunkett III, G.3
-
12
-
-
3042720475
-
Genome evolution in yeasts
-
Dujon, B., D. Sherman, G. Fischer et al. (107 co-authors). 2004. Genome evolution in yeasts. Nature 430:35-44.
-
(2004)
Nature
, vol.430
, pp. 35-44
-
-
Dujon, B.1
Sherman, D.2
Fischer, G.3
-
13
-
-
0034568798
-
Evidence for symmetric chromosomal inversions around the replication origin in bacteria
-
Eisen, J. A., J. F. Heidelberg, O. White, and S. L. Salzberg. 2000. Evidence for symmetric chromosomal inversions around the replication origin in bacteria. Genome Biol. 1:11.11-11.19.
-
(2000)
Genome Biol.
, vol.1
-
-
Eisen, J.A.1
Heidelberg, J.F.2
White, O.3
Salzberg, S.L.4
-
14
-
-
0034604382
-
Prediction of transcription terminators in bacterial genomes
-
Ermolaeva, M. D., H. G. Khalak, O. White, H. O. Smith, and S. L. Salzberg. 2000. Prediction of transcription terminators in bacterial genomes. J. Mol. Biol. 301:27-33.
-
(2000)
J. Mol. Biol.
, vol.301
, pp. 27-33
-
-
Ermolaeva, M.D.1
Khalak, H.G.2
White, O.3
Smith, H.O.4
Salzberg, S.L.5
-
15
-
-
0022203256
-
Phylogenies and the comparative method
-
Felsenstein, J. 1985. Phylogenies and the comparative method. Am. Nat. 125:1-15.
-
(1985)
Am. Nat.
, vol.125
, pp. 1-15
-
-
Felsenstein, J.1
-
16
-
-
0036021697
-
Genome deterioration: Loss of repeated sequences and accumulation of junk DNA
-
Frank, A. C., H. Amiri, and S. G. Andersson. 2002. Genome deterioration: loss of repeated sequences and accumulation of junk DNA. Genetica 115:1-12.
-
(2002)
Genetica
, vol.115
, pp. 1-12
-
-
Frank, A.C.1
Amiri, H.2
Andersson, S.G.3
-
17
-
-
0034307716
-
It takes two transposons to tango
-
Gray, Y. H. M. 2000. It takes two transposons to tango. Trends Genet. 16:461-468.
-
(2000)
Trends Genet.
, vol.16
, pp. 461-468
-
-
Gray, Y.H.M.1
-
18
-
-
0028605344
-
Clonal divergence in Escherichia coli as a result of recombination, not mutation
-
Guttman, D. S., and D. E. Dykhuizen. 1994. Clonal divergence in Escherichia coli as a result of recombination, not mutation. Science 266:1380-1383.
-
(1994)
Science
, vol.266
, pp. 1380-1383
-
-
Guttman, D.S.1
Dykhuizen, D.E.2
-
19
-
-
0042855695
-
Prokaryotic chromosomes and disease
-
Hacker, J., U. Hentschel, and U. Dobrindt. 2003. Prokaryotic chromosomes and disease. Science 301:790-793.
-
(2003)
Science
, vol.301
, pp. 790-793
-
-
Hacker, J.1
Hentschel, U.2
Dobrindt, U.3
-
20
-
-
13944254077
-
Chromosomal organization is shaped by the transcription regulatory network
-
Hershberg, R., E. Yeger-Lotem, and H. Margalit. 2005. Chromosomal organization is shaped by the transcription regulatory network. Trends Genet. 21:138-142.
-
(2005)
Trends Genet.
, vol.21
, pp. 138-142
-
-
Hershberg, R.1
Yeger-Lotem, E.2
Margalit, H.3
-
21
-
-
0024060034
-
Effects of chromosomal inversion on cell fitness in Escherichia coli K-12
-
Hill, C. W., and J. A. Gray. 1988. Effects of chromosomal inversion on cell fitness in Escherichia coli K-12. Genetics 119:771-778.
-
(1988)
Genetics
, vol.119
, pp. 771-778
-
-
Hill, C.W.1
Gray, J.A.2
-
22
-
-
0019639160
-
Inversions between ribosomal RNA genes of E. coli
-
USA
-
Hill, C. W., and B. Harnish. 1981. Inversions between ribosomal RNA genes of E. coli. Proc. Natl. Acad. Sci. USA 78:7069-7072.
-
(1981)
Proc. Natl. Acad. Sci.
, vol.78
, pp. 7069-7072
-
-
Hill, C.W.1
Harnish, B.2
-
23
-
-
0034733685
-
Accommodating phylogenetic uncertainty in evolutionary studies
-
Huelsenbeck, J. P., B. Rannala, and J. P. Masly. 2000. Accommodating phylogenetic uncertainty in evolutionary studies. Science 288:2349-2350.
-
(2000)
Science
, vol.288
, pp. 2349-2350
-
-
Huelsenbeck, J.P.1
Rannala, B.2
Masly, J.P.3
-
24
-
-
0000657507
-
Impact of homologous recombination on genome organization and stability
-
R. L. Charlebois, ed. ASM Press, Wash.
-
Hughes, D. 1999. Impact of homologous recombination on genome organization and stability. Pp. 109-128 in R. L. Charlebois, ed. Organization of the prokaryotic genome. ASM Press, Wash.
-
(1999)
Organization of the Prokaryotic Genome
, pp. 109-128
-
-
Hughes, D.1
-
25
-
-
33746683240
-
Evaluating genome dynamics: The constraints on rearrangements within bacterial genomes
-
_. 2000. Evaluating genome dynamics: the constraints on rearrangements within bacterial genomes. GenomeBiol. 1:6.1-6.8.
-
(2000)
GenomeBiol.
, vol.1
-
-
-
26
-
-
1842427830
-
The evolutionary dynamics of eukaryotic gene order
-
Hurst, L. D., C. Pal, and M. J. Lercher. 2004. The evolutionary dynamics of eukaryotic gene order. Nat. Rev. Genet. 5:299-310.
-
(2004)
Nat. Rev. Genet.
, vol.5
, pp. 299-310
-
-
Hurst, L.D.1
Pal, C.2
Lercher, M.J.3
-
27
-
-
0032568582
-
Measuring genome evolution
-
USA
-
Huynen, M. A., and P. Bork. 1998. Measuring genome evolution. Proc. Natl. Acad. Sci. USA 95:5849-5856.
-
(1998)
Proc. Natl. Acad. Sci.
, vol.95
, pp. 5849-5856
-
-
Huynen, M.A.1
Bork, P.2
-
28
-
-
0033058895
-
Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbial genomes
-
Itoh, T., K. Takemoto, H. Mori, and T. Gojobori. 1999. Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbial genomes. Mol. Biol. Evol. 16:332-346.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 332-346
-
-
Itoh, T.1
Takemoto, K.2
Mori, H.3
Gojobori, T.4
-
29
-
-
54249116230
-
Genetic regulatory mechanisms in the synthesis of proteins
-
Jacob, F., and J. Monod. 1961. Genetic regulatory mechanisms in the synthesis of proteins. J. Mol. Biol. 3:318-356.
-
(1961)
J. Mol. Biol.
, vol.3
, pp. 318-356
-
-
Jacob, F.1
Monod, J.2
-
30
-
-
18644378721
-
Genome sequence of Shigella flexneri 2a: Insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157
-
Jin, Q., Z. Yuan, J. Xu et al. (34 co-authors). 2002. Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157. Nucleic Acids Res. 30:4432-4441.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 4432-4441
-
-
Jin, Q.1
Yuan, Z.2
Xu, J.3
-
31
-
-
0032953228
-
Comparative genomes of Chlamydia pneumoniae and C. trachomatis
-
Kalman, S., W. Mitchell, R. Marathe, C. Lammel, J. Fan, R. W. Hyman, L. Olinger, J. Grimwood, R. W. Davis, and R. S. Stephens. 1999. Comparative genomes of Chlamydia pneumoniae and C. trachomatis. Nat. Genet. 21:385-389.
-
(1999)
Nat. Genet.
, vol.21
, pp. 385-389
-
-
Kalman, S.1
Mitchell, W.2
Marathe, R.3
Lammel, C.4
Fan, J.5
Hyman, R.W.6
Olinger, L.7
Grimwood, J.8
Davis, R.W.9
Stephens, R.S.10
-
32
-
-
0030993173
-
Dynamic bacterial genome organization
-
Kolsto, A.-B. 1997. Dynamic bacterial genome organization. Mol. Microbiol. 24:241-248.
-
(1997)
Mol. Microbiol.
, vol.24
, pp. 241-248
-
-
Kolsto, A.-B.1
-
33
-
-
3042703044
-
Analysis of genomic context: Prediction of functional associations from conserved bidirectionally transcribed gene pairs
-
Korbel, J. O., L. J. Jensen, C. von Mering, and P. Bork. 2004. Analysis of genomic context: prediction of functional associations from conserved bidirectionally transcribed gene pairs. Nat. Biotechnol. 22:911-917.
-
(2004)
Nat. Biotechnol.
, vol.22
, pp. 911-917
-
-
Korbel, J.O.1
Jensen, L.J.2
Von Mering, C.3
Bork, P.4
-
34
-
-
0034306448
-
Gene context conservation of a higher order than operons
-
Lathe, W. C., B. Snel, and P. Bork. 2000. Gene context conservation of a higher order than operons. Trends Biochem. Sci. 25:474-479.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 474-479
-
-
Lathe, W.C.1
Snel, B.2
Bork, P.3
-
35
-
-
0242440314
-
Gene organization: Selection, selfishness, and serendipity
-
Lawrence, J. G. 2003. Gene organization: selection, selfishness, and serendipity. Annu. Rev. Microbiol. 57:419-440.
-
(2003)
Annu. Rev. Microbiol.
, vol.57
, pp. 419-440
-
-
Lawrence, J.G.1
-
37
-
-
0030994798
-
Amelioration of bacterial genomes: Rates of change and exchange
-
Lawrence, J. G., and H. Ochman. 1997. Amelioration of bacterial genomes: rates of change and exchange. J. Mol. Evol. 44:383-397.
-
(1997)
J. Mol. Evol.
, vol.44
, pp. 383-397
-
-
Lawrence, J.G.1
Ochman, H.2
-
38
-
-
0022413030
-
Characterization and properties of very large inversions of the E. coli chromosome along the origin-to-terminus axis
-
Louarn, J. M., J. P. Bouche, F. Legendre, J. Louarn, and J. Patte. 1985. Characterization and properties of very large inversions of the E. coli chromosome along the origin-to-terminus axis. Mol. Gen. Genet. 201:467-476.
-
(1985)
Mol. Gen. Genet.
, vol.201
, pp. 467-476
-
-
Louarn, J.M.1
Bouche, J.P.2
Legendre, F.3
Louarn, J.4
Patte, J.5
-
39
-
-
0030619995
-
Phylogenies and the comparative method: A general approach to incorporating phylogenetic information into the analysis of interspecific data
-
Martins, E. P., and T. F. Hansen. 1997. Phylogenies and the comparative method: a general approach to incorporating phylogenetic information into the analysis of interspecific data. Am. Nat. 149:656-667.
-
(1997)
Am. Nat.
, vol.149
, pp. 656-667
-
-
Martins, E.P.1
Hansen, T.F.2
-
40
-
-
0035950182
-
Complete genome sequence of Salmonella enterica serovar Typhimurium LT2
-
McClelland, M., K. Sanderson, J. Spieth et al. (26 co-authors). 2001. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. Nature 413:852-656.
-
(2001)
Nature
, vol.413
, pp. 852-656
-
-
McClelland, M.1
Sanderson, K.2
Spieth, J.3
-
41
-
-
0035479142
-
Deletional bias and the evolution of bacterial genomes
-
Mira, A., H. Ochman, and N. A. Moran. 2001. Deletional bias and the evolution of bacterial genomes. Trends Genet. 17:589-596.
-
(2001)
Trends Genet.
, vol.17
, pp. 589-596
-
-
Mira, A.1
Ochman, H.2
Moran, N.A.3
-
42
-
-
0030210340
-
Gene order is not conserved in bacterial evolution
-
Mushegian, A. R., and E. V. Koonin. 1996. Gene order is not conserved in bacterial evolution. Trends Genet. 12:289-290.
-
(1996)
Trends Genet.
, vol.12
, pp. 289-290
-
-
Mushegian, A.R.1
Koonin, E.V.2
-
43
-
-
0038480005
-
Genome sequence of an M3 strain of Streptococcus pyogenes reveals a large-scale genomic rearrangement in invasive strains and new insights into phage evolution
-
Nakagawa, I., K. Kurokawa, A. Yamashita et al. (13 co-authors). 2003. Genome sequence of an M3 strain of Streptococcus pyogenes reveals a large-scale genomic rearrangement in invasive strains and new insights into phage evolution. Genome Res. 13:1042-1055.
-
(2003)
Genome Res.
, vol.13
, pp. 1042-1055
-
-
Nakagawa, I.1
Kurokawa, K.2
Yamashita, A.3
-
44
-
-
0034671796
-
Evolutionary dynamics of full genome content in Escherichia coli
-
Ochman, H., and I. B. Jones. 2000. Evolutionary dynamics of full genome content in Escherichia coli. EMBO J. 19:6637-6643.
-
(2000)
EMBO J.
, vol.19
, pp. 6637-6643
-
-
Ochman, H.1
Jones, I.B.2
-
45
-
-
0023514080
-
Evolution in bacteria: Evidence for a universal substitution rate in cellular genomes
-
Ochman, H., and A. C. Wilson. 1987. Evolution in bacteria: evidence for a universal substitution rate in cellular genomes. J. Mol. Evol. 26:74-86.
-
(1987)
J. Mol. Evol.
, vol.26
, pp. 74-86
-
-
Ochman, H.1
Wilson, A.C.2
-
46
-
-
0033055062
-
The use of gene clusters to infer functional coupling
-
USA
-
Overbeek, R., M. Fonstein, M. D'Souza, G. D. Pusch, and N. Maltsev. 1999. The use of gene clusters to infer functional coupling. Proc. Natl. Acad. Sci. USA 96:2896-2901.
-
(1999)
Proc. Natl. Acad. Sci.
, vol.96
, pp. 2896-2901
-
-
Overbeek, R.1
Fonstein, M.2
D'Souza, M.3
Pusch, G.D.4
Maltsev, N.5
-
47
-
-
0033613376
-
Inferring the historical patterns of biological evolution
-
Pagel, M. 1999. Inferring the historical patterns of biological evolution. Nature 401:877-884.
-
(1999)
Nature
, vol.401
, pp. 877-884
-
-
Pagel, M.1
-
48
-
-
0042355274
-
Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica
-
Parkhill, J., M. Sebaihia, A. Preston et al. (54 co-authors). 2003. Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica. Nat. Genet. 35:32-40.
-
(2003)
Nat. Genet.
, vol.35
, pp. 32-40
-
-
Parkhill, J.1
Sebaihia, M.2
Preston, A.3
-
49
-
-
0042237296
-
Detection and possible role of two large nondivisible zones on the Escherichia coli chromosome
-
USA
-
Rebollo, J. E., V. François, and J. M. Louarn. 1988. Detection and possible role of two large nondivisible zones on the Escherichia coli chromosome. Proc. Natl. Acad. Sci. USA 85:9391-9395.
-
(1988)
Proc. Natl. Acad. Sci.
, vol.85
, pp. 9391-9395
-
-
Rebollo, J.E.1
François, V.2
Louarn, J.M.3
-
50
-
-
0242380287
-
DNA repeats lead to the accelerated loss of gene order in bacteria
-
Rocha, E. P. C. 2003a. DNA repeats lead to the accelerated loss of gene order in bacteria. Trends Genet. 19:600-604.
-
(2003)
Trends Genet.
, vol.19
, pp. 600-604
-
-
Rocha, E.P.C.1
-
51
-
-
0037803483
-
An appraisal of the potential for illegitimate recombination in bacterial genomes and its consequences: From duplications to genome reduction
-
_. 2003b. An appraisal of the potential for illegitimate recombination in bacterial genomes and its consequences: from duplications to genome reduction. Genome Res. 13:1123-1132.
-
(2003)
Genome Res.
, vol.13
, pp. 1123-1132
-
-
-
52
-
-
3142679507
-
The replication-related organisation of the bacterial chromosome
-
_. 2004a. The replication-related organisation of the bacterial chromosome. Microbiology 150:1609-1627.
-
(2004)
Microbiology
, vol.150
, pp. 1609-1627
-
-
-
53
-
-
4644309277
-
Order and disorder in bacterial genomes
-
_. 2004b. Order and disorder in bacterial genomes. Curr. Opin. Microbiol. 7:519-527.
-
(2004)
Curr. Opin. Microbiol.
, vol.7
, pp. 519-527
-
-
-
54
-
-
0042667165
-
Essentiality, not expressiveness, drives gene strand bias in bacteria
-
Rocha, E. P. C., and A. Danchin. 2003. Essentiality, not expressiveness, drives gene strand bias in bacteria. Nat. Genet. 34:377-378.
-
(2003)
Nat. Genet.
, vol.34
, pp. 377-378
-
-
Rocha, E.P.C.1
Danchin, A.2
-
55
-
-
0034612277
-
Operons in Escherichia coli: Genomic analyses and predictions
-
USA
-
Salgado, H., G. Moreno-Hagelsieb, T. F. Smith, and J. Collado-Vides. 2000. Operons in Escherichia coli: genomic analyses and predictions. Proc. Natl. Acad. Sci. USA 97:6652-6657.
-
(2000)
Proc. Natl. Acad. Sci.
, vol.97
, pp. 6652-6657
-
-
Salgado, H.1
Moreno-Hagelsieb, G.2
Smith, T.F.3
Collado-Vides, J.4
-
56
-
-
0345447448
-
Rearrangements and chromosomal evolution
-
Sankoff, D. 2003. Rearrangements and chromosomal evolution. Curr. Opin. Genet. Dev. 13:583-587.
-
(2003)
Curr. Opin. Genet. Dev.
, vol.13
, pp. 583-587
-
-
Sankoff, D.1
-
57
-
-
0036205377
-
Tree-puzzle: Maximum likelihood phylogenetic analysis using quartets and parallel computing
-
Schmidt, H. A., K. Strimmer, M. Vingron, and A. von Haeseler. 2002. Tree-puzzle: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18:502-504.
-
(2002)
Bioinformatics
, vol.18
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
Von Haeseler, A.4
-
58
-
-
0023750111
-
Rearrangement of the bacterial chromosome: Forbidden inversions
-
Segall, A., M. J. Mahan, and J. R. Roth. 1988. Rearrangement of the bacterial chromosome: forbidden inversions. Science 241:1314-1318.
-
(1988)
Science
, vol.241
, pp. 1314-1318
-
-
Segall, A.1
Mahan, M.J.2
Roth, J.R.3
-
59
-
-
0034618559
-
Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS
-
Shigenobu, S., H. Watanabe, M. Hattori, Y. Sakaki, and H. Ishikawa. 2000. Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS. Nature 407:81-86.
-
(2000)
Nature
, vol.407
, pp. 81-86
-
-
Shigenobu, S.1
Watanabe, H.2
Hattori, M.3
Sakaki, Y.4
Ishikawa, H.5
-
60
-
-
0035500843
-
Genome size reduction through multiple events of gene disintegration in Buchnera APS
-
Silva, F. J., A. Latorre, and A. Moya. 2001. Genome size reduction through multiple events of gene disintegration in Buchnera APS. Trends Genet. 17:615-618.
-
(2001)
Trends Genet.
, vol.17
, pp. 615-618
-
-
Silva, F.J.1
Latorre, A.2
Moya, A.3
-
61
-
-
0037384544
-
Why are the genomes of endosymbiotic bacteria so stable?
-
_. 2003. Why are the genomes of endosymbiotic bacteria so stable? Trends Genet. 19:176-180.
-
(2003)
Trends Genet.
, vol.19
, pp. 176-180
-
-
-
62
-
-
0035058359
-
Evolution of prokaryotic gene order: Genome rearrangements in closely related species
-
Suyama, M., and P. Bork. 2001. Evolution of prokaryotic gene order: genome rearrangements in closely related species. Trends Genet. 17:10-13.
-
(2001)
Trends Genet.
, vol.17
, pp. 10-13
-
-
Suyama, M.1
Bork, P.2
-
63
-
-
0010414313
-
Evolution of gene order conservation in prokaryotes
-
Tamames, J. 2001. Evolution of gene order conservation in prokaryotes. Genome Biol. 2:0020.0021-0020.0011.
-
(2001)
Genome Biol.
, vol.2
-
-
Tamames, J.1
-
64
-
-
0037189373
-
50 Million years of genomic stasis in endosymbiotic bacteria
-
Tamas, I., L. Klasson, B. Canback, A. K. Naslund, A. S. Eriksson, J. J. Wernegreen, J. P. Sandstrom, N. A. Moran, and S. G. Andersson. 2002. 50 million years of genomic stasis in endosymbiotic bacteria. Science 296:2376-2379.
-
(2002)
Science
, vol.296
, pp. 2376-2379
-
-
Tamas, I.1
Klasson, L.2
Canback, B.3
Naslund, A.K.4
Eriksson, A.S.5
Wernegreen, J.J.6
Sandstrom, J.P.7
Moran, N.A.8
Andersson, S.G.9
-
65
-
-
0033776631
-
Genome rearrangement by replication-directed translocation
-
Tillier, E. R., and R. A. Collins. 2000. Genome rearrangement by replication-directed translocation. Nat. Genet. 26:195-197.
-
(2000)
Nat. Genet.
, vol.26
, pp. 195-197
-
-
Tillier, E.R.1
Collins, R.A.2
-
66
-
-
0031973808
-
Genetic instability of the Streptomyces chromosome
-
Volff, J.-N., and J. Altenbuchner. 1998. Genetic instability of the Streptomyces chromosome. Mol. Microbiol. 27:239-246.
-
(1998)
Mol. Microbiol.
, vol.27
, pp. 239-246
-
-
Volff, J.-N.1
Altenbuchner, J.2
-
67
-
-
4444340534
-
Statistical analysis of the spatial distribution of operons in the transcriptional regulation network of Escherichia coli
-
Warren, P. B., and P. R. ten Wolde. 2004. Statistical analysis of the spatial distribution of operons in the transcriptional regulation network of Escherichia coli. J. Mol. Biol. 342:1379-1390.
-
(2004)
J. Mol. Biol.
, vol.342
, pp. 1379-1390
-
-
Warren, P.B.1
Ten Wolde, P.R.2
-
68
-
-
0348044549
-
Genome trees constructed using five different approaches suggest new major bacterial clades
-
Wolf, Y. I., I. B. Rogozin, N. V. Grishin, R. L. Tatusov, and E. V. Koonin. 2001. Genome trees constructed using five different approaches suggest new major bacterial clades. BMC Evol. Biol. 1:8.
-
(2001)
BMC Evol. Biol.
, vol.1
, pp. 8
-
-
Wolf, Y.I.1
Rogozin, I.B.2
Grishin, N.V.3
Tatusov, R.L.4
Koonin, E.V.5
-
69
-
-
19344378727
-
Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: A streamlined genome overrun by mobile genetic elements
-
Wu, M., L. V. Sun, J. Vamathevan et al. (30 co-authors) 2004. Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements. PLoS Biol. 2:E69.
-
(2004)
PLoS Biol.
, vol.2
-
-
Wu, M.1
Sun, L.V.2
Vamathevan, J.3
-
70
-
-
0036676469
-
Computational identification of operons in microbial genomes
-
Zheng, Y., J. D. Szustakowski, L. Fortnow, R. J. Roberts, and S. Kasif. 2002. Computational identification of operons in microbial genomes. Genome Res. 12:1221-1230.
-
(2002)
Genome Res.
, vol.12
, pp. 1221-1230
-
-
Zheng, Y.1
Szustakowski, J.D.2
Fortnow, L.3
Roberts, R.J.4
Kasif, S.5
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