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Volumn 342, Issue 1, 2006, Pages 323-329

Structural insights into the catalytic mechanism of sphingomyelinases D and evolutionary relationship to glycerophosphodiester phosphodiesterases

Author keywords

Catalytic mechanism; Crystal structure; Glycerophosphodiester phosphodiesterases; Hydrodynamic behavior; Mg2+ binding site; Sphingomyelinase D

Indexed keywords

AMINO ACID; DISULFIDE; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE; MAGNESIUM ION; PHOSPHODIESTERASE; SPHINGOMYELIN; SPHINGOMYELIN PHOSPHODIESTERASE; SPHINGOMYELINASE D; SPIDER VENOM; SULFATE; UNCLASSIFIED DRUG;

EID: 32644488753     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2006.01.123     Document Type: Article
Times cited : (61)

References (24)
  • 2
    • 1642403610 scopus 로고    scopus 로고
    • Ceramide-1-phosphate: A novel regulator of cell activation
    • A. Gomez-Munoz Ceramide-1-phosphate: a novel regulator of cell activation FEBS Lett. 562 2004 5 10
    • (2004) FEBS Lett. , vol.562 , pp. 5-10
    • Gomez-Munoz, A.1
  • 3
    • 2442658976 scopus 로고    scopus 로고
    • Lysophospholipid G protein-coupled receptors
    • B. Anliker, and J. Chun Lysophospholipid G protein-coupled receptors J. Biol. Chem. 279 2004 20555 20558
    • (2004) J. Biol. Chem. , vol.279 , pp. 20555-20558
    • Anliker, B.1    Chun, J.2
  • 4
  • 6
    • 17144386576 scopus 로고    scopus 로고
    • Structural basis for metal ion coordination and the catalytic mechanism of sphingomyelinases D
    • M.T. Murakami, M.F. Fernandes-Pedrosa, D.V. Tambourgi, and R.K. Arni Structural basis for metal ion coordination and the catalytic mechanism of sphingomyelinases D J. Biol. Chem. 280 2005 13658 13664
    • (2005) J. Biol. Chem. , vol.280 , pp. 13658-13664
    • Murakami, M.T.1    Fernandes-Pedrosa, M.F.2    Tambourgi, D.V.3    Arni, R.K.4
  • 8
    • 0029185933 scopus 로고
    • CRYSOL-a Program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates
    • D.I. Svergun, C. Barbareto, and M.H.J. Koch CRYSOL-a Program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates J. Appl. Crystallogr. 28 1995 768 773
    • (1995) J. Appl. Crystallogr. , vol.28 , pp. 768-773
    • Svergun, D.I.1    Barbareto, C.2    Koch, M.H.J.3
  • 9
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray diffraction data collection in oscillation mode
    • Z. Otwinowski, and W. Minor Processing of X-ray diffraction data collection in oscillation mode Methods Enzymol. 276 1997 307 326
    • (1997) Methods Enzymol. , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 10
    • 0032922193 scopus 로고    scopus 로고
    • SFCHECK: A unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model
    • A.A. Vaguine, J. Richelle, and S.J. Wodak SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model Acta Crystallogr. D Biol. Crystallogr. 55 1999 191 205
    • (1999) Acta Crystallogr. D Biol. Crystallogr. , vol.55 , pp. 191-205
    • Vaguine, A.A.1    Richelle, J.2    Wodak, S.J.3
  • 11
    • 0031059039 scopus 로고    scopus 로고
    • Detecting and overcoming crystal twinning
    • T.O. Yeates Detecting and overcoming crystal twinning Methods Enzymol. 276 1997 344 358
    • (1997) Methods Enzymol. , vol.276 , pp. 344-358
    • Yeates, T.O.1
  • 12
    • 84920325457 scopus 로고
    • AMoRe: An automated package for molecular replacement
    • J. Navaza AMoRe: an automated package for molecular replacement Acta Crystallogr. sect. A 50 1994 157 163
    • (1994) Acta Crystallogr. Sect. a , vol.50 , pp. 157-163
    • Navaza, J.1
  • 13
    • 0030924992 scopus 로고    scopus 로고
    • Refinement of macromolecular structures by the maximum-likelihood method
    • G.N. Murshudov, A.A. Vagin, and E.J. Dodson Refinement of macromolecular structures by the maximum-likelihood method Acta Crystallogr. Sect. D 53 1997 240 255
    • (1997) Acta Crystallogr. Sect. D , vol.53 , pp. 240-255
    • Murshudov, G.N.1    Vagin, A.A.2    Dodson, E.J.3
  • 14
    • 0022333120 scopus 로고
    • Interactive computer graphics: FRODO
    • T.A. Jones Interactive computer graphics: FRODO Methods Enzymol. 115 1985 157 171
    • (1985) Methods Enzymol. , vol.115 , pp. 157-171
    • Jones, T.A.1
  • 15
    • 13244281317 scopus 로고    scopus 로고
    • Coot: Model-building tools for molecular graphics
    • P. Emsley, and K. Cowtan Coot: model-building tools for molecular graphics Acta Crystallogr. Sect. D 60 2004 2126 2132
    • (2004) Acta Crystallogr. Sect. D , vol.60 , pp. 2126-2132
    • Emsley, P.1    Cowtan, K.2
  • 16
    • 0032964481 scopus 로고    scopus 로고
    • Automated protein model building combined with iterative structure refinement
    • A. Perrakis, R. Morris, and V.S. Lamzin Automated protein model building combined with iterative structure refinement Nat. Struct. Biol. 6 1999 458 463
    • (1999) Nat. Struct. Biol. , vol.6 , pp. 458-463
    • Perrakis, A.1    Morris, R.2    Lamzin, V.S.3
  • 18
    • 0027136282 scopus 로고
    • Comparative protein modelling by satisfaction of spatial restraints
    • A. Sali, and T.L. Blundell Comparative protein modelling by satisfaction of spatial restraints J. Mol. Biol. 234 1993 779 815
    • (1993) J. Mol. Biol. , vol.234 , pp. 779-815
    • Sali, A.1    Blundell, T.L.2
  • 19
    • 0033810049 scopus 로고    scopus 로고
    • Modeling of loops in protein structures
    • A. Fiser, R.K. Do, and A. Sali Modeling of loops in protein structures Protein Sci. 9 2000 1753 1773
    • (2000) Protein Sci. , vol.9 , pp. 1753-1773
    • Fiser, A.1    Do, R.K.2    Sali, A.3
  • 23
    • 32144438835 scopus 로고    scopus 로고
    • Lateral gene transfer of a dermonecrotic toxin between spiders and bacteria
    • M.H. Cordes, and G.J. Binford Lateral gene transfer of a dermonecrotic toxin between spiders and bacteria Bioinformatics 22 2005 264 268
    • (2005) Bioinformatics , vol.22 , pp. 264-268
    • Cordes, M.H.1    Binford, G.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.