Gene expression profiling in common cormorant liver with an oligo array: Assessing the potential toxic effects of environmental contaminants

Environmental Science and Technology

Volumn 40, Issue 3, 2006, Pages 1076-1083

  Nakayama, Kei ^a   Iwata, Hisato ^a   Kim, Eun Young ^a   Tashiro, Kosuke ^b   Tanabe, Shinsuke ^a  

^a EHIME UNIVERSITY   (Japan)

^b KYUSHU UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CHLORINE COMPOUNDS; CONCENTRATION (PROCESS); CONTAMINATION; ENVIRONMENTAL IMPACT; GENES; GENETIC ENGINEERING; TOXIC MATERIALS;

ENVIRONMENTAL CONTAMINANTS; EXPRESSED SEQUENCE TAG (EST); GENE EXPRESSIONS; OLIGONUCLEOTIDES;

BIOLOGICAL ORGANS;

2,3,7,8 TETRACHLORODIBENZO PARA DIOXIN; 4,4' ISOPROPYLIDENEDIPHENOL; BUTYLTIN DERIVATIVE; CHLORDANE; CHLORPHENOTANE; COPPER ZINC SUPEROXIDE DISMUTASE; CYSTEINE DIOXYGENASE; CYTOCHROME P450 1A; DIOXYGENASE; ENZYME INHIBITOR; ESTROGEN RECEPTOR; FURAN DERIVATIVE; GLUTATHIONE PEROXIDASE; GLUTATHIONE PEROXIDASE 3; GLUTATHIONE TRANSFERASE; HAPTOGLOBIN; HEMOPEXIN; HEXACHLOROCYCLOHEXANE; MESSENGER RNA; OLIGONUCLEOTIDE; OVOTRANSFERRIN; POLYCHLORINATED BIPHENYL; POLYCHLORINATED DIBENZODIOXIN; PROTEIN; REACTIVE OXYGEN METABOLITE; UNCLASSIFIED DRUG;

BIOLOGICAL ORGANS; CHLORINE COMPOUNDS; CONCENTRATION (PROCESS); CONTAMINATION; ENVIRONMENTAL IMPACT; GENES; GENETIC ENGINEERING; TOXIC MATERIALS;

GENE EXPRESSION;

ANIMAL TISSUE; ARTICLE; BIRD; CHEMICAL ENVIRONMENT; CORMORANT; DNA MICROARRAY; ENVIRONMENT; EXPRESSED SEQUENCE TAG; GENE EXPRESSION PROFILING; HYBRIDIZATION; LIVER; MULTIPLE REGRESSION; NONHUMAN; OXIDATIVE STRESS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; TOXICITY;

ANIMALS; BIRDS; CYTOCHROME P-450 ENZYME SYSTEM; ENVIRONMENTAL MONITORING; ENVIRONMENTAL POLLUTANTS; EXPRESSED SEQUENCE TAGS; GENE EXPRESSION PROFILING; LIVER; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REPRODUCIBILITY OF RESULTS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER;

ANIMALIA; AVES; PHALACROCORACIDAE; PHALACROCORAX CARBO;

EID: 32344449586     PISSN: 0013936X     EISSN: None     Source Type: Journal    
DOI: 10.1021/es051386m     Document Type: Article

References (40)

1. Kubota, A.; Iwata, H.; Tanabe, S.; Yoneda, K.; Tobata, S. Levels and toxicokinetic behaviors of PCDD, PCDF, and coplanar PCB congeners in common cormorants from Lake Biwa, Japan. Environ. Sci. Technol. 2004, 38, 3853-3859.
2. Kubota, A.; Iwata, H.; Tanabe, S. Persistent organochlorines contaminants and hepatic cytochrome P450s in common cormorants and black-eared kites. Organohalogen Compd. 2003, 64, 391-394.
3. Ministry of the Envrionment. Results of FY2001 survey of endocrine disrupting chemicals (wildlife); Biodiversity Policy Division, Nature Conservation Bureau, Ministry of the Environment: Tokyo, Japan, 2002.
4. Neumann, N. F.; Galvez, F. DNA microarrays and toxicogenomics: applications for ecotoxicology? Biotechnol. Adv. 2002, 20, 391-419.
5. Zeytun, A.; McKallip, R. J.; Fisher, M.; Camacho, I.; Nagarkatti, M.; Nagarkatti, P. S. Analysis of 2,3,7,8-tetrachlorodibenzo-p-dioxin-induced gene expression profile in vivo using pathway-specific cDNA arrays. Toxicology 2002, 178, 241-260.
6. Vezina, C. M.; Walker, N. J.; Olson, J. R. Subchronic exposure of TCDD, PeCDF, PCB126, and PCB153: effect on hepatic gene expression. Environ. Health Perspect. 2004, 112, 1636-1644.
7. Frueh, F. W.; Hayashibara, K. C.; Brown, P. O.; Whitlock, J. P., Jr. Use of cDNA microarrays to analyze dioxin-induced changes in human liver gene expression. Toxicol. Lett. 2001, 122, 189-203.
8. Ezendam, J.; Staedtler, F.; Pennings, J.; Vandebriel, R. J.; Pieters, R.; Harleman, J. H.; Vos, J. G. Toxicogenomics of subchronic hexachlorobenzene exposure in Brown Norway rats. Environ. Health Perspect. 2004, 112, 782-791.
9. Adeeko, A.; Li, D.; Doucet, J.; Cooke, G. M.; Trasler, J. M.; Robaire, B.; Hales, B. F. Gestational exposure to persistent organic pollutants: maternal liver residues, pregnancy outcome, and effects on hepatic gene expression profiles in the dam and fetus. Toxicol Sci. 2003, 72, 242-252.
10. Williams, T. D.; Gensberg, K.; Minchin, S. D.; Chipman, J. K. A DNA expression array to detect toxic stress response in European flounder (Platichthysflesus). Aquat. Toxicol. 2003, 65, 141-157.
11. Van den Berg, M.; Birnbaum, L.; Bosveld, A. T. C.; Brunström, B.; Cook, P.; Feeley, M.; Giesy, J. P.; Hanberg, A.; Hasegawa, R.; Kennedy, S. W.; Kubiak, T.; Larsen, J. C.; van Leeuwen, F. X. R.; Liem, A. K. D.; Nolt, C.; Peterson, R. E.; Poellinger, L.; Safe, S.; Schrenk, D.; Tillitt, D.; Tysklind, M.; Younes, M.; Wærn, F.; Zacharewski, T. Toxic equivalency factors (TEFs) for PCBs, PCDDs, PCDFs for humans and wildlife. Environ. Health Perspect. 1998, 106, 775-792.
12. Saeed, A. I.; Sharov, V.; White, J.; Li, J.; Liang, W.; Bhagabati, N.; Braisted, J.; Klapa, M.; Currier, T.; Thiagarajan, M.; Sturn, A.; Snuffin, M.; Rezantsev, A.; Popov, D.; Ryltsov, A.; Kostukovich, E.; Borisovsky, I.; Liu, Z.; Vinsavich, A.; Trush, V.; Quackenbush, J. TM4: a free, open-source system for microarray data management and analysis. Biotechniques 2003, 34, 374-378.
13. Helberg, M.; Bustnes, J. O.; Erikstad, K. E.; Kristiansen, K. O.; Skaare, J. U. Relationship between reproductive performance and organochlorine contaminants in great black-backed gulls (Larus marinus). Environ. Pollut. 2005, 134, 475-483.
14. Watanabe, M. X.; Iwata, H.; Watanabe, M.; Tanabe, S.; Subramanian, A.; Yoneda, K.; Hashimoto, T. Bioaccumulation of organochlorines in crows from an Indian open waste dumping site: evidence for direct transfer of dioxin-like congeners from the contaminated soil. Environ. Sci. Technol. 2005, 39, 4421-4430.
15. Mori, C.; Komiyama, M.; Adachi, T.; Sakurai, K.; Nishimura, D.; Takashima, K.; Todaka, E. Application of toxicogenomic analysis to risk assessment of delayed long-term effects of multiple chemicals, including endocrine disruptors in human fetuses. Environ. Health Perspect. 2003, 111, 803-809.
16. Bagchi, D.; Bagchi, M.; Hassoun, E. A.; Stohs, S. J. In vitro and in vivo generation of reactive oxygen species, DNA damage and lactate dehydrogenatase leakage by selected pesticides. Toxicology 1995, 104, 129-140.
17. Banerjee, B. D.; Seth, V.; Bhattacharya, A.; Pasha, S. T.; Chakraborty, A. K. Biochemical effects of some pesticides on lipid peroxidation and free-radical scavengers. Toxicol. Lett. 1999, 107, 33-47.
18. Fadhel, Z.; Lu, Z.; Robertson, L. W.; Glauert, H. P. Effect of 3,3′,4,4′-tetrachlorobiphenyl and 2,2′,4,4′,5,5′- hexachlorobiphenyl on the induction of hepatic lipid peroxidation and cytochrome P-450 associated enzyme activities in rats. Toxicology 2002, 175, 15-25.
19. Shertzer, H. G.; Clay, C. D.; Center, M. B.; Chames, M. C.; Schneider, S. N.; Oakley, G. G.; Nebert, D. W.; Dalton, T. P. Uncoupling-mediated generation of reactive oxygen by halogenated aromatic hydrocarbons in mouse liver microsomes. Free Radical Biol. Med. 2004, 36, 618-631.
20. Gilday, D.; Gannon, M.; Yutzey, K.; Bader, D.; Rifkind, A. B. Molecular cloning and expression of two novel avian cytochrome P450 1A enzymes induced by 2,3,7,8-tetrachlorodibenzo-p-dioxin. J. Biol. Chem. 1996, 271, 33054-33059.
21. Kubota, A.; Iwata, H.; Handley-Goldstone, H. M.; Kim, E. Y.; Stegeman, J. J.; Tanabe, S. Cytochrome P450 1A4 and 1A5 in common cormorant (Phalacrocorax carbo): evolutionary relationships and functional implications associated with dioxin and related compounds. Toxicol. Sci., 2005, submitted for publication.
22. Kubota, A.; Iwata, H.; Tanabe, S.; Yoneda, K.; Tobata, S. Hepatic CYP1A induction by dioxin-like compounds, and congener-specific metabolism and sequestration in wild common cormorants from Lake Biwa, Japan. Environ. Sci. Technol. 2005, 39, 3611-3619.
23. Puntarulo, S.; Cederbaum, A. I. Production of reactive oxygen species by microsomes enriched in specific human cytochrome P450 enzymes. Free Radical Biol. Med. 1998, 24, 1324-1330.
24. Schlezinger, J. J.; White, R. D.; Stegeman, J. J. Oxidative inactivation of cytochrome P-450 1A (CYP1A) stimulated by 3,3′,4,4′- tetrachlorobiphenyl: production of reactive oxygen by vertebrate CYP1As. Mol. Pharmacol. 1999, 56, 588-597.
25. Kono, Y.; Okada, S.; Tazawa, Y.; Kanzaki, S.; Mura, T.; Ueta, E.; Nanba, E.; Otsuka, Y. Response of anti-oxidant enzymes mRNA in the neonatal rat liver exposed to 1,2,3,4-tetrachlorodibenzo-p-dioxin via lactation. Pediatr. Int. 2002, 44, 481-487.
26. Kern, P. A.; Fishman, R. B.; Song, W.; Brown, A.-D.; Fonseca, V. The effect of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) on oxidative enzymes in adipocytes and liver. Toxicology 2002, 171, 117-125.
27. Sridhar, M.; Venkataraman, P.; Dhanammal, S.; Arunkumar, A.; Aruldhas, M. M.; Srinivasan, N.; Arunakaran, J. Impact of polychlorinated biphenyl (Aroclor 1254) and vitamin C on antioxidant system of rat ventral prostate. Asian J. Androl. 2004, 6, 19-22.
28. Bondy, G.; Curran, I.; Doucet, J.; Armstrong, C.; Coady, L.; Hierlihy, L.; Femie, S.; Robertson, P.; Barker, M. Toxicity of transnonachlor to Sprague-Dawley rats in a 90-day feeding study. Food Chem. Toxicol. 2004, 42, 1015-1027.
29. Sahoo, A.; Chainy, G. B. N. Acute hexachlorocyclohexane-induced oxidative stress in rat cerebral hemisphere. Neurochem. Res. 1998, 23, 1079-1084.
30. Twaroski, T. P.; O'Brien, M. L.; Robertson, L. W. Effects of selected polychlorinated biphenyl (PCB) congeners on hepatic glutathione, glutathione-related enzymes, and selenium status: Implications for oxidative stress. Biochem. Pharmacol. 2001, 62, 273-281.
31. Jin, X.; Kennedy, S. W.; Muccio, T. D.; Moon, T. W. Role of oxidative stress and antioxidant defence in 3,3′,4,4′,5-pentachlorobiphenyl- induced toxicity and species-differential sensitivity in chicken and duck embryos. Toxicol. Appl. Pharmacol. 2001, 172, 241-248.
32. Otto, D. M.; Moon, T. W. Phase I and II enzymes and antioxidant responses in different tissues of brown bullheads from relatively polluted and nonpolluted systems. Arch. Environ. Contam. Toxicol. 1996, 31, 141-147.
33. Leffers, H.; Næsby, M.; Vendelbo, B.; Skakkebæk, N. E.; Jørgensen, M. Oestrogenic potencies of Zeranol, oestradiol, diethylstillboestrol, Bisphenol A and genistein: implications for exposure assessment of potential endocrine disrupters. Hum. Reprod. 2001, 16, 1037-1045.
34. Yokota, H.; Seki, M.; Maeda, M.; Oshima, Y.; Tadokoro, H.; Honjo, T.; Kobayashi, K. Life-cycle toxicity of 4-nonylphenol to medaka (Oryzias latipes). Environ. Toxicol. Chem. 2001, 20, 2552-2560.
35. Kang, I. J.; Yokota, H.; Oshima, Y.; Tsuruda, Y.; Yamaguchi, T.; Maeda, M.; Imada, N.; Tadokoro, H.; Honjo, T. Effect of 17 β-estradiol on the reproduction of Japanese medaka (Oryzias latipes). Chemosphere 2002, 47, 71-80.
36. Kang, I. J.; Yokota, H.; Oshima, Y.; Tsuruda, Y.; Hano, T.; Maeda, M.; Imada, N.; Tadokoro, H.; Honjo, T. Effects of 4-nonylphenol on reproduction of Japanese medaka, Oryzias latipes. Environ. Toxicol. Chem. 2003, 22, 2438-2445.
37. Seki, M.; Yokota, H.; Maeda, M.; Kobayashi, K. Fish full life-cycle testing for 17 β-estradiol on medaka (Oryzias latipes). Environ. Toxicol. Chem. 2005, 24, 1259-1266.
38. Lee, D. C.; McKnight, G. S.; Palmiter, R. D. The action of estrogen and progesterone on the expression of the transferrin gene. A comparison of the response in chick liver and oviduct. J. Biol. Chem. 1978, 253, 3494-3503.
39. Borrás, C.; Sastre, J.; García-Sala, D.; Lloret, A.; Pallardó, F. V.; Viña, J. Mitochondria from females exhibit higher antioxidant gene expression and lower oxidative damage than males. Free Radical Biol. Med. 2003, 34, 546-552.
40. |MAP|/NFκB cascade. Aging Cell 2005, 4, 113-118.