-
2
-
-
0034282901
-
Sequestration of the active site by interdomain shifting. Crystallographic and spectroscopic evidence for distinct conformations of L-3-hydroxyacyl-CoA dehydrogenase
-
J.J. Barycki, L.K. O'Brien, A.W. Strauss, and L.J. Banaszak Sequestration of the active site by interdomain shifting. Crystallographic and spectroscopic evidence for distinct conformations of L-3-hydroxyacyl-CoA dehydrogenase J. Biol. Chem. 275 2000 27186 27196
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 27186-27196
-
-
Barycki, J.J.1
O'Brien, L.K.2
Strauss, A.W.3
Banaszak, L.J.4
-
3
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
A.T. Brünger, P.D. Adams, G.M. Clore, W.L. DeLano, P. Gros, R.W. Grosse-Kunstleve, J.S. Jiang, J. Kuszewski, M. Nilges, and N.S. Pannu Crystallography & NMR system: a new software suite for macromolecular structure determination Acta Crystallogr. D54 1998 905 921
-
(1998)
Acta Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
-
4
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
CCP4 (Collaborative Computational Project, Number 4)
-
CCP4 (Collaborative Computational Project, Number 4) The CCP4 suite: programs for protein crystallography Acta Crystallgr. D Biol. Crystallogr. 50 1994 760 763
-
(1994)
Acta Crystallgr. D Biol. Crystallogr.
, vol.50
, pp. 760-763
-
-
-
5
-
-
2342525085
-
Heterogeneity and inaccuracy in protein structures solved by X-ray crystallography
-
M. DePristro, P.I.W. de Bakker, and T.L. Blundell Heterogeneity and inaccuracy in protein structures solved by X-ray crystallography Structure 12 2004 831 838
-
(2004)
Structure
, vol.12
, pp. 831-838
-
-
Depristro, M.1
De Bakker, P.I.W.2
Blundell, T.L.3
-
6
-
-
0033985020
-
The mitochondrial trifunctional protein: Centre of a β-oxidation metabolon?
-
S. Eaton, T. Bursby, B. Middleton, M. Pourfarzam, K. Mills, A.W. Johnson, and K. Bartlett The mitochondrial trifunctional protein: centre of a β-oxidation metabolon? Biochem. Soc. Trans. 28 2000 177 182
-
(2000)
Biochem. Soc. Trans.
, vol.28
, pp. 177-182
-
-
Eaton, S.1
Bursby, T.2
Middleton, B.3
Pourfarzam, M.4
Mills, K.5
Johnson, A.W.6
Bartlett, K.7
-
9
-
-
0031439913
-
Reconstitution, morphology and crystallization of a fatty acid β-oxidation multienzyme complex from Pseudomonas fragi
-
M. Ishikawa, Y. Mikami, J. Usukura, H. Iwasaki, H. Shinagawa, and K. Morikawa Reconstitution, morphology and crystallization of a fatty acid β-oxidation multienzyme complex from Pseudomonas fragi Biochem. J. 328 1997 815 820
-
(1997)
Biochem. J.
, vol.328
, pp. 815-820
-
-
Ishikawa, M.1
Mikami, Y.2
Usukura, J.3
Iwasaki, H.4
Shinagawa, H.5
Morikawa, K.6
-
10
-
-
3543016798
-
Structural basis for channelling mechanism of a fatty acid β-oxidation multienzyme complex
-
M. Ishikawa, D. Tsuchiya, T. Oyama, Y. Tsunaka, and K. Morikawa Structural basis for channelling mechanism of a fatty acid β-oxidation multienzyme complex EMBO J. 23 2004 2745 2754
-
(2004)
EMBO J.
, vol.23
, pp. 2745-2754
-
-
Ishikawa, M.1
Tsuchiya, D.2
Oyama, T.3
Tsunaka, Y.4
Morikawa, K.5
-
11
-
-
0036913740
-
Burning fat: The structural basis of fatty acid β-oxidation
-
J.J. Kim, and K.P. Battaile Burning fat: the structural basis of fatty acid β-oxidation Curr. Opin. Struct. Biol. 12 2002 721 728
-
(2002)
Curr. Opin. Struct. Biol.
, vol.12
, pp. 721-728
-
-
Kim, J.J.1
Battaile, K.P.2
-
12
-
-
0034849689
-
MASSHA: A graphics system for rigid-body modelling of macromolecular complexes against solution scattering data
-
P.V. Konarev, M.V. Petoukhov, and D.I. Svergun MASSHA: a graphics system for rigid-body modelling of macromolecular complexes against solution scattering data J. Appl. Crystallogr. 34 2001 527 532
-
(2001)
J. Appl. Crystallogr.
, vol.34
, pp. 527-532
-
-
Konarev, P.V.1
Petoukhov, M.V.2
Svergun, D.I.3
-
13
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
P.E. Kraulis MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures J. Appl. Crystallogr. 24 1991 946 950
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis, P.E.1
-
14
-
-
0034718925
-
Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor
-
N. Kunishima, Y. Shimada, Y. Tsuji, T. Sato, M. Yamamoto, T. Kumasaka, S. Nakanishi, H. Jingami, and K. Morikawa Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor Nature 407 2000 971 977
-
(2000)
Nature
, vol.407
, pp. 971-977
-
-
Kunishima, N.1
Shimada, Y.2
Tsuji, Y.3
Sato, T.4
Yamamoto, M.5
Kumasaka, T.6
Nakanishi, S.7
Jingami, H.8
Morikawa, K.9
-
15
-
-
14144254724
-
High resolution crystal structures of human cytosolic thiolase (CT): A comparison of the active sites of human CT, bacterial thiolase, and bacterial KAS I
-
P. Kursula, H. Sikkila, T. Fukao, N. Kondo, and R.K. Wierenga High resolution crystal structures of human cytosolic thiolase (CT): a comparison of the active sites of human CT, bacterial thiolase, and bacterial KAS I J. Mol. Biol. 347 2005 189 201
-
(2005)
J. Mol. Biol.
, vol.347
, pp. 189-201
-
-
Kursula, P.1
Sikkila, H.2
Fukao, T.3
Kondo, N.4
Wierenga, R.K.5
-
16
-
-
0037376665
-
Nicotinamide adenine dinucleotide, a metabolic regulator of transcription, longevity and disease
-
S.J. Lin, and L. Guarente Nicotinamide adenine dinucleotide, a metabolic regulator of transcription, longevity and disease Curr. Opin. Cell Biol. 15 2003 241 246
-
(2003)
Curr. Opin. Cell Biol.
, vol.15
, pp. 241-246
-
-
Lin, S.J.1
Guarente, L.2
-
17
-
-
12744263121
-
Simultaneous determination of protein structure and dynamics
-
K. Lindorff-Larsen, R.B. Best, M.A. DePristro, C.M. Dobson, and M. Vendruscolo Simultaneous determination of protein structure and dynamics Nature 433 2005 128 132
-
(2005)
Nature
, vol.433
, pp. 128-132
-
-
Lindorff-Larsen, K.1
Best, R.B.2
Depristro, M.A.3
Dobson, C.M.4
Vendruscolo, M.5
-
18
-
-
0028144138
-
Aspartate transcarbamoylase from Escherichia coli: Activity and regulation
-
W.N. Lipscomb Aspartate transcarbamoylase from Escherichia coli: activity and regulation Adv. Enzymol. Relat. Areas Mol. Biol. 68 1994 67 151
-
(1994)
Adv. Enzymol. Relat. Areas Mol. Biol.
, vol.68
, pp. 67-151
-
-
Lipscomb, W.N.1
-
19
-
-
0035036495
-
Direct structural evidence for a concerted allosteric transition in Escherichia coli aspartate transcarbamoylase
-
C.P. Macol, H. Tsuruta, B. Stec, and E.R. Kantrowitz Direct structural evidence for a concerted allosteric transition in Escherichia coli aspartate transcarbamoylase Nat. Struct. Biol. 8 2001 423 426
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 423-426
-
-
MacOl, C.P.1
Tsuruta, H.2
Stec, B.3
Kantrowitz, E.R.4
-
20
-
-
0028174351
-
The 2.8 Å crystal structure of peroxisomal 3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: A five-layered αβαβα structure constructed from two core domains of identical topology
-
M. Mathieu, J.P. Zeelen, R.A. Pauptit, R. Erdmann, W.H. Kunau, and R.K. Wierenga The 2.8 Å crystal structure of peroxisomal 3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: a five-layered αβαβ α structure constructed from two core domains of identical topology Structure 2 1994 797 808
-
(1994)
Structure
, vol.2
, pp. 797-808
-
-
Mathieu, M.1
Zeelen, J.P.2
Pauptit, R.A.3
Erdmann, R.4
Kunau, W.H.5
Wierenga, R.K.6
-
21
-
-
0033548502
-
Single-molecule biomechanics with optical methods
-
A.D. Mehta, M. Rief, J.A. Spudich, D.A. Smith, and R.M. Simmons Single-molecule biomechanics with optical methods Science 283 1999 1689 1695
-
(1999)
Science
, vol.283
, pp. 1689-1695
-
-
Mehta, A.D.1
Rief, M.2
Spudich, J.A.3
Smith, D.A.4
Simmons, R.M.5
-
22
-
-
0030815133
-
Raster3D version 2.0: A program for photorealistic molecular graphics
-
E.A. Merrit, and D.J. Bacon Raster3D version 2.0: a program for photorealistic molecular graphics Methods Enzymol. 277 1997 505 524
-
(1997)
Methods Enzymol.
, vol.277
, pp. 505-524
-
-
Merrit, E.A.1
Bacon, D.J.2
-
23
-
-
0033569705
-
A biosynthetic thiolase in complex with a reaction intermediate: The crystal structure provides new insights into the catalytic mechanism
-
Y. Modis, and R.K. Wierenga A biosynthetic thiolase in complex with a reaction intermediate: the crystal structure provides new insights into the catalytic mechanism Struct. Fold. Des. 7 1998 1279 1290
-
(1998)
Struct. Fold. Des.
, vol.7
, pp. 1279-1290
-
-
Modis, Y.1
Wierenga, R.K.2
-
24
-
-
13844253947
-
SAXS and the working protein
-
B. Nagar, and J. Kuriyan SAXS and the working protein Structure 13 2005 169 170
-
(2005)
Structure
, vol.13
, pp. 169-170
-
-
Nagar, B.1
Kuriyan, J.2
-
25
-
-
84920325457
-
AMoRe: An automated package for molecular replacement
-
J. Navaza AMoRe: an automated package for molecular replacement Acta Crystallogr. A50 1994 157 163
-
(1994)
Acta Crystallogr.
, vol.50
, pp. 157-163
-
-
Navaza, J.1
-
26
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
C.W. Carter Jr. R.M. Sweet Academic Press New York
-
Z. Otwinowski, and W. Minor Processing of X-ray diffraction data collected in oscillation mode C.W. Carter Jr. R.M. Sweet Methods in Enzymology, Volume 276 1997 Academic Press New York 307 326
-
(1997)
Methods in Enzymology, Volume 276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
28
-
-
0037701771
-
New methods for domain structure determination of proteins from solution scattering data
-
M.V. Petoukhov, and D.I. Svergun New methods for domain structure determination of proteins from solution scattering data J. Appl. Crystallogr. 36 2003 540 544
-
(2003)
J. Appl. Crystallogr.
, vol.36
, pp. 540-544
-
-
Petoukhov, M.V.1
Svergun, D.I.2
-
29
-
-
0029185933
-
CRYSOL: A program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates
-
D. Svergun, C. Barberato, and M.H. Koch CRYSOL: a program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates J. Appl. Crystallogr. 28 1995 768 773
-
(1995)
J. Appl. Crystallogr.
, vol.28
, pp. 768-773
-
-
Svergun, D.1
Barberato, C.2
Koch, M.H.3
-
30
-
-
18144362422
-
Substrate-induced interconversion of protein quaternary structure isoforms
-
L. Tang, L. Stith, and E.K. Jaffe Substrate-induced interconversion of protein quaternary structure isoforms J. Biol. Chem. 280 2005 15786 15793
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 15786-15793
-
-
Tang, L.1
Stith, L.2
Jaffe, E.K.3
-
32
-
-
32044450629
-
Solution X-ray scattering analysis of fatty acid β-oxidation multienzyme complex
-
Tsuchiya, D., Suzuki, Y., Shimizu, N., Ishikawa, M., and Morikawa, K. (2004). Solution X-ray scattering analysis of fatty acid β-oxidation multienzyme complex. SPring-8 User Experiment Report, http://www.spring8.or.jp/ e/publication/UER03B/178.pdf 12, 178.
-
(2004)
SPring-8 User Experiment Report
, vol.12
, pp. 178
-
-
Tsuchiya, D.1
Suzuki, Y.2
Shimizu, N.3
Ishikawa, M.4
Morikawa, K.5
-
33
-
-
0026344818
-
Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of Escherichia coli
-
S.B. Zimmerman, and S.O. Trach Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of Escherichia coli J. Mol. Biol. 222 1991 599 620
-
(1991)
J. Mol. Biol.
, vol.222
, pp. 599-620
-
-
Zimmerman, S.B.1
Trach, S.O.2
|