메뉴 건너뛰기




Volumn 91, Issue 9, 2004, Pages 1427-1435

Bayesian analysis of combined chloroplast loci, using multiple calibrations, supports the recent arrival of Melastomataceae in Africa and Madagascar

Author keywords

Bayesian divergence time estimation; Biogeography; Chloroplast DNA; Melastomataceae fossils; Multiple simultaneous calibrations; Relaxed molecular clock

Indexed keywords

BAYESIAN ANALYSIS; BIOGEOGRAPHY; DIVERGENCE; DNA; EVOLUTION;

EID: 31844451322     PISSN: 00029122     EISSN: 00029122     Source Type: Journal    
DOI: 10.3732/ajb.91.9.1427     Document Type: Article
Times cited : (43)

References (52)
  • 1
    • 0034985049 scopus 로고    scopus 로고
    • New combinations and new names in some Brazilian Microlicieae (Melastomataceae), with notes on the delimitation of Lavoisiera, Microlicia, and Trembleya
    • ALMEDA, F., AND A. B. MARTINS. 2001. New combinations and new names in some Brazilian Microlicieae (Melastomataceae), with notes on the delimitation of Lavoisiera, Microlicia, and Trembleya. Novon 11: 1-7.
    • (2001) Novon , vol.11 , pp. 1-7
    • Almeda, F.1    Martins, A.B.2
  • 2
    • 0002133377 scopus 로고    scopus 로고
    • Evidence for the earliest stage of angiosperm pollen evolution: A paleoequatorial section from Israel
    • D. W. Taylor and L. J. Kickey [eds.], Chapman & Hall, New York, New York, USA
    • BRENNER, G. J. 1996. Evidence for the earliest stage of angiosperm pollen evolution: a paleoequatorial section from Israel. In D. W. Taylor and L. J. Kickey [eds.], Flowering plant origin, evolution, and phylogeny, 91-115. Chapman & Hall, New York, New York, USA.
    • (1996) Flowering Plant Origin, Evolution, and Phylogeny , pp. 91-115
    • Brenner, G.J.1
  • 3
    • 0033865010 scopus 로고    scopus 로고
    • Correlations among fruit traits and evolution of different fruits within Melastomataceae
    • CLAUSING, G., K. MEYER, AND S. S. RENNER. 2000. Correlations among fruit traits and evolution of different fruits within Melastomataceae. Botanical Journal of the Linnaean Society 133: 303-326.
    • (2000) Botanical Journal of the Linnaean Society , vol.133 , pp. 303-326
    • Clausing, G.1    Meyer, K.2    Renner, S.S.3
  • 4
    • 0001597889 scopus 로고    scopus 로고
    • Molecular phylogenetics of Melastomataceae and Memecylaceae: Implications for character evolution
    • CLAUSING, G., AND S. S. RENNER. 2001a. Molecular phylogenetics of Melastomataceae and Memecylaceae: implications for character evolution. American Journal of Botany 88: 486-498.
    • (2001) American Journal of Botany , vol.88 , pp. 486-498
    • Clausing, G.1    Renner, S.S.2
  • 5
    • 0347450808 scopus 로고    scopus 로고
    • Evolution of growth form in epiphytic Dissochaeteae (Melastomataceae)
    • CLAUSING, G., AND S. S. RENNER. 2001b. Evolution of growth form in epiphytic Dissochaeteae (Melastomataceae). Organisms, Diversity and Evolution 1: 45-60.
    • (2001) Organisms, Diversity and Evolution , vol.1 , pp. 45-60
    • Clausing, G.1    Renner, S.S.2
  • 6
    • 0001744264 scopus 로고
    • The phytogeographic significance of some extinct Gondwana pollen types from the Tertiary of the southwestern Cape (South Africa)
    • COETZEE, J. A., AND J. MULLER. 1984. The phytogeographic significance of some extinct Gondwana pollen types from the Tertiary of the southwestern Cape (South Africa). Annals of the Missouri Botanical Garden 71: 1088-1099.
    • (1984) Annals of the Missouri Botanical Garden , vol.71 , pp. 1088-1099
    • Coetzee, J.A.1    Muller, J.2
  • 7
    • 0344525804 scopus 로고
    • Seeds of the Melastomataceae from the Miocene of Central Europe
    • J. Kovar-Eder [ed.], Museum of Natural History, Vienna, Austria
    • COLLINSON, M. E., AND M. PINGEN. 1992. Seeds of the Melastomataceae from the Miocene of Central Europe. In J. Kovar-Eder [ed.], Palaeovegetational development in Europe, 129-139. Museum of Natural History, Vienna, Austria.
    • (1992) Palaeovegetational Development in Europe , pp. 129-139
    • Collinson, M.E.1    Pingen, M.2
  • 8
    • 0036807292 scopus 로고    scopus 로고
    • Early Tertiary out-of-India dispersal of Crypteroniaceae: Evidence from phylogeny and molecular dating
    • CONTI, E., T. ERIKSSON, J. SCHÖNENBERGER, K. J. SYTSMA, AND D. BAUM. 2002. Early Tertiary out-of-India dispersal of Crypteroniaceae: evidence from phylogeny and molecular dating. Evolution 56: 1931-1942.
    • (2002) Evolution , vol.56 , pp. 1931-1942
    • Conti, E.1    Eriksson, T.2    Schönenberger, J.3    Sytsma, K.J.4    Baum, D.5
  • 9
    • 0004248569 scopus 로고
    • On the Tertiary flora of Belorussia
    • in Russian
    • DOROFEEV, P. I. 1960. On the Tertiary flora of Belorussia. Botanichesky Zhurnal SSSR 45: 1418-1434 (in Russian).
    • (1960) Botanichesky Zhurnal SSSR , vol.45 , pp. 1418-1434
    • Dorofeev, P.I.1
  • 10
    • 0004764833 scopus 로고
    • Izdatelstvo Akademii Nauk SSSR, Moskva-Leningrad, Russia (in Russian)
    • DOROFEEV, P. I. 1963. The Tertiary floras of western Siberia. Izdatelstvo Akademii Nauk SSSR, Moskva-Leningrad, Russia (in Russian).
    • (1963) The Tertiary Floras of Western Siberia
    • Dorofeev, P.I.1
  • 11
    • 0003407683 scopus 로고
    • Akademii Nauk, Leningrad, Russia (in Russian, posthumous work, F. Y. Velichkevich, ed.)
    • DOROFEEV, P. I. 1988. Miocene floras of the Tambov district. Akademii Nauk, Leningrad, Russia (in Russian, posthumous work, F. Y. Velichkevich, ed.).
    • (1988) Miocene Floras of the Tambov District
    • Dorofeev, P.I.1
  • 12
    • 0004268321 scopus 로고
    • Melastomatáceas fósseis da Basia Tertiária de Fonseca, Minas Gerais
    • DUARTE, L. 1956. Melastomatáceas fósseis da Basia Tertiária de Fonseca, Minas Gerais. Divisão de Geologia e Mineralogia, Boletim 161: 8-32.
    • (1956) Divisão de Geologia e Mineralogia, Boletim , vol.161 , pp. 8-32
    • Duarte, L.1
  • 14
    • 0030393832 scopus 로고
    • Les fruits et graines du Miocene de Bioul (Entre-Samre-et-Meuse, Belgique). Etude qualitative, quantitative et considerations paleoecologiques
    • FAIRON-DEMARET, M. 1994 [1996]. Les fruits et graines du Miocene de Bioul (Entre-Samre-et-Meuse, Belgique). Etude qualitative, quantitative et considerations paleoecologiques. Annales de la Societé Geologique de Belgique 117: 277-309.
    • (1994) Annales de la Societé Geologique de Belgique , vol.117 , pp. 277-309
    • Fairon-Demaret, M.1
  • 15
    • 31744441805 scopus 로고    scopus 로고
    • Phylogeny and circumscription of the near-endemic Brazilian tribe Microlicieae (Melastomataceae)
    • FRITSCH, P. W., F. ALMEDA, S. S. RENNER, A. B. MARTINS, AND B. CRUZ. 2004. Phylogeny and circumscription of the near-endemic Brazilian tribe Microlicieae (Melastomataceae). American Journal of Botany 91: 1105-1114.
    • (2004) American Journal of Botany , vol.91 , pp. 1105-1114
    • Fritsch, P.W.1    Almeda, F.2    Renner, S.S.3    Martins, A.B.4    Cruz, B.5
  • 17
    • 0001774722 scopus 로고
    • Hölzer aus marinen Sanden des Oberen Eozän von Helmstedt (Niedersachsen)
    • GOTTWALD, H. 1992. Hölzer aus marinen Sanden des Oberen Eozän von Helmstedt (Niedersachsen). Palaeontographica, Abteilung B 255: 27-103.
    • (1992) Palaeontographica, Abteilung B , vol.255 , pp. 27-103
    • Gottwald, H.1
  • 18
    • 0006628465 scopus 로고
    • A revision of Ochthocharis (Melastomataceae) including Phaeoneuron in Africa
    • pl. 2, 3
    • HANSEN, C., AND G. E. WICKENS. 1981. A revision of Ochthocharis (Melastomataceae) including Phaeoneuron in Africa. Kew Bulletin 36: 13-29. pl. 2, 3.
    • (1981) Kew Bulletin , vol.36 , pp. 13-29
    • Hansen, C.1    Wickens, G.E.2
  • 19
    • 31844453574 scopus 로고    scopus 로고
    • Dating in the 21st century: Theory and reality of finding a date for your clade
    • HERENDEEN, P. S., AND P. R. CRANE. 2003. Dating in the 21st century: theory and reality of finding a date for your clade. Botanical Society of America meeting abstracts at http://www.2003.botanyconference.org/
    • (2003) Botanical Society of America Meeting Abstracts
    • Herendeen, P.S.1    Crane, P.R.2
  • 21
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogeny
    • HUELSENBECK, J. P., AND F. R. RONQUIST. 2001. MrBayes: Bayesian inference of phylogeny. Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.R.2
  • 22
    • 0344094512 scopus 로고
    • Una Melastomatácea fósil del Terciario carbonifero de Antioquia (Eoceno)
    • HUERTAS, G. 1977. Una Melastomatácea fósil del Terciario carbonifero de Antioquia (Eoceno). Caldasia 12: 35-39.
    • (1977) Caldasia , vol.12 , pp. 35-39
    • Huertas, G.1
  • 24
    • 0036800826 scopus 로고    scopus 로고
    • Group II introns as phylogenetic tools: Structure, function, and evolutionary constraints
    • KELCHNER, S. A. 2002. Group II introns as phylogenetic tools: structure, function, and evolutionary constraints. American Journal of Botany 1651-1669.
    • (2002) American Journal of Botany , pp. 1651-1669
    • Kelchner, S.A.1
  • 26
    • 0011376316 scopus 로고
    • Palynologie des basins de Gandarela et Fonseca (Eocene de L'Etat de Minas Gerais, Brésil)
    • LIMA, M. R. DE, AND M. SALARD-CHEBOLDAEFF. 1981. Palynologie des basins de Gandarela et Fonseca (Eocene de L'Etat de Minas Gerais, Brésil). Boletim IG, Instituto de Geosciencias, USP 5, 12: 33-54.
    • (1981) Boletim IG, Instituto de Geosciencias, USP 5 , vol.12 , pp. 33-54
    • De Lima, M.R.1    Salard-Cheboldaeff, M.2
  • 28
    • 0005588415 scopus 로고    scopus 로고
    • Die untermiozänen Floren aus der Spremberger Folge und dem II. Flözhorizont der Lausitz. Teil III. Dialypetalae und Sympetalae
    • MAI, D. H. 2000. Die untermiozänen Floren aus der Spremberger Folge und dem II. Flözhorizont der Lausitz. Teil III. Dialypetalae und Sympetalae. Palaeontographica Abteilung B 253: 1-106.
    • (2000) Palaeontographica Abteilung B , vol.253 , pp. 1-106
    • Mai, D.H.1
  • 29
    • 3042533405 scopus 로고    scopus 로고
    • A preliminary phylogeny of the tribe Miconieae (Melastomataceae) based on nrITS sequence data and its implications inflorescence position
    • MICHELANGELI, F. A., D. S. PENNEYS, J. GIZA, D. SOLTIS, M. H. HILLS, AND J. D. SKEAN JR. 2004. A preliminary phylogeny of the tribe Miconieae (Melastomataceae) based on nrITS sequence data and its implications inflorescence position. Taxon 53: 279-290.
    • (2004) Taxon , vol.53 , pp. 279-290
    • Michelangeli, F.A.1    Penneys, D.S.2    Giza, J.3    Soltis, D.4    Hills, M.H.5    Skean Jr., J.D.6
  • 30
    • 0242487488 scopus 로고    scopus 로고
    • Performance-based selection of likelihood models for phylogeny estimation
    • MININ, V., Z. ABDO, P. JOYCE, AND J. SULLIVAN. 2003. Performance-based selection of likelihood models for phylogeny estimation. Systematic Biology 52: 674-683.
    • (2003) Systematic Biology , vol.52 , pp. 674-683
    • Minin, V.1    Abdo, Z.2    Joyce, P.3    Sullivan, J.4
  • 31
    • 0345374635 scopus 로고    scopus 로고
    • Missing fossils, molecular clocks and the origin of the Melastomataceae
    • MORLEY, R. J., AND C. W. DICK. 2003. Missing fossils, molecular clocks and the origin of the Melastomataceae. American Journal of Botany 1638-1645.
    • (2003) American Journal of Botany , pp. 1638-1645
    • Morley, R.J.1    Dick, C.W.2
  • 32
    • 33845242233 scopus 로고
    • Fossil pollen records of extant angiosperms
    • MULLER, J. 1981. Fossil pollen records of extant angiosperms. Botanical Review 47: 1-142.
    • (1981) Botanical Review , vol.47 , pp. 1-142
    • Muller, J.1
  • 35
    • 31844455689 scopus 로고    scopus 로고
    • Tropical trans-Atlantic disjunctions, sea surface currents, and wind patterns
    • press
    • RENNER, S. S. 2004a. Tropical trans-Atlantic disjunctions, sea surface currents, and wind patterns. International Journal of Plant Sciences 165, press.
    • (2004) International Journal of Plant Sciences , pp. 165
    • Renner, S.S.1
  • 36
    • 31844456607 scopus 로고    scopus 로고
    • Assembly of the Melastomataceae flora of Madagascar inferred from Bayesian divergence time estimation
    • RENNER, S. S. 2004b. Assembly of the Melastomataceae flora of Madagascar inferred from Bayesian divergence time estimation. Philosophical Transactions of the Royal Society, B.
    • (2004) Philosophical Transactions of the Royal Society, B
    • Renner, S.S.1
  • 37
    • 0000685649 scopus 로고    scopus 로고
    • Historical biogeography of Melastomataceae: The roles of Tertiary migration and long-distance dispersal
    • RENNER, S. S., G. CLAUSING, AND K. MEYER. 2001. Historical biogeography of Melastomataceae: the roles of Tertiary migration and long-distance dispersal. American Journal of Botany 88: 1290-1300.
    • (2001) American Journal of Botany , vol.88 , pp. 1290-1300
    • Renner, S.S.1    Clausing, G.2    Meyer, K.3
  • 38
    • 4944258461 scopus 로고    scopus 로고
    • Tropical intercontinental disjunctions: Gondwana breakup, immigration from the boreotropics, and transoceanic dispersal
    • in press
    • RENNER, S. S., AND T. J. GIVNISH [EDS.]. 2004. Tropical intercontinental disjunctions: Gondwana breakup, immigration from the boreotropics, and transoceanic dispersal. International Journal of Plant Sciences 165, in press.
    • (2004) International Journal of Plant Sciences , vol.165
    • Renner, S.S.1    Givnish, T.J.2
  • 39
    • 0034890012 scopus 로고    scopus 로고
    • Melastomataceae come full circle: Biogeographic reconstruction and molecular clock dating
    • RENNER, S. S., AND K. MEYER. 2001. Melastomataceae come full circle: biogeographic reconstruction and molecular clock dating. Evolution 55: 1315-1324.
    • (2001) Evolution , vol.55 , pp. 1315-1324
    • Renner, S.S.1    Meyer, K.2
  • 40
    • 0028590655 scopus 로고
    • Species richness within families of flowering plants
    • RICKLEFS, R. E., AND S. S. RENNER. 1994. Species richness within families of flowering plants. Evolution 48: 1619-1636.
    • (1994) Evolution , vol.48 , pp. 1619-1636
    • Ricklefs, R.E.1    Renner, S.S.2
  • 41
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • RONQUIST, F., AND J. P. HUELSENBECK. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 42
    • 0000633798 scopus 로고
    • Palynologie Maestrichtienne et Tertiaire du basin sedimentaire litoral du Cameroun
    • SALARD-CHEBOLDAEFF, M. 1978 [1979]. Palynologie Maestrichtienne et Tertiaire du basin sedimentaire litoral du Cameroun. Pollen & Spores 20: 215-260.
    • (1978) Pollen & Spores , vol.20 , pp. 215-260
    • Salard-Cheboldaeff, M.1
  • 43
    • 0000252353 scopus 로고
    • Palynologie maestrichtienne et tertiaire du Cameroun. Resultats botaniques
    • SALARD-CHEBOLDAEFF, M. 1981. Palynologie maestrichtienne et tertiaire du Cameroun. Resultats botaniques. Review of Palaeobotany and Palynology 32: 401-439.
    • (1981) Review of Palaeobotany and Palynology , vol.32 , pp. 401-439
    • Salard-Cheboldaeff, M.1
  • 44
    • 0036135468 scopus 로고    scopus 로고
    • Estimating absolute rates of molecular evolution and divergence times: A penalized likelihood approach
    • SANDERSON, M. J. 2002. Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach. Molecular Biology and Evolution 19: 101-109.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 101-109
    • Sanderson, M.J.1
  • 45
    • 0038348291 scopus 로고    scopus 로고
    • Molecular data from 27 proteins do not support a Precambrian origin of land plants
    • SANDERSON, M. J. 2003. Molecular data from 27 proteins do not support a Precambrian origin of land plants. American Journal of Botany 90: 954-956.
    • (2003) American Journal of Botany , vol.90 , pp. 954-956
    • Sanderson, M.J.1
  • 48
    • 0036803223 scopus 로고    scopus 로고
    • Divergence time estimation and rate evolution with multilocus data sets
    • THORNE, J. L., AND H. KISHINO. 2002. Divergence time estimation and rate evolution with multilocus data sets. Systematic Biology 51: 689-702.
    • (2002) Systematic Biology , vol.51 , pp. 689-702
    • Thorne, J.L.1    Kishino, H.2
  • 49
    • 0031741182 scopus 로고    scopus 로고
    • Estimating the rate of evolution of the rate of molecular evolution
    • THORNE, J. L., H. KISHINO, AND I. S. PAINTER. 1998. Estimating the rate of evolution of the rate of molecular evolution. Molecular Biology and Evolution 15: 1647-1657.
    • (1998) Molecular Biology and Evolution , vol.15 , pp. 1647-1657
    • Thorne, J.L.1    Kishino, H.2    Painter, I.S.3
  • 50
    • 0003155167 scopus 로고
    • The Eocene orchards and gardens of Republic Washington
    • WEHR, W. C., AND D. Q. HOPKINS. 1994. The Eocene orchards and gardens of Republic Washington. Washington Geology 22: 27-34.
    • (1994) Washington Geology , vol.22 , pp. 27-34
    • Wehr, W.C.1    Hopkins, D.Q.2
  • 51
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • YANG, Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. CABIOS 13: 555-556. http://abacus.gene.ucl.ac.uk/software/ paml.html/
    • (1997) CABIOS , vol.13 , pp. 555-556
    • Yang, Z.1
  • 52
    • 0242571576 scopus 로고    scopus 로고
    • Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species
    • YANG, Z., AND A. D. YODER. 2003. Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species. Systematic Biology 52: 1-12.
    • (2003) Systematic Biology , vol.52 , pp. 1-12
    • Yang, Z.1    Yoder, A.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.