Three novel cis-acting elements required for efficient plus-strand DNA synthesis of the hepatitis B virus genome

Journal of Virology

Volumn 78, Issue 14, 2004, Pages 7455-7464

  Lee, Jehan ^a   Shin, Myeong Kyun ^a   Lee, Hye Jin ^a   Yoon, Gyesoon ^a   Ryu, Wang Shick ^a,b  

^a Yonsei University   (South Korea)

^b NONE   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

CIS ACTING ELEMENT; COMPLEMENTARY DNA; PRIMER RNA; VIRUS DNA;

ARTICLE; CONTROLLED STUDY; DNA STRAND; DNA SYNTHESIS; DNA TEMPLATE; DNA TRANSCRIPTION; GENE DELETION; GENE SEQUENCE; GENETIC ANALYSIS; HEPATITIS B VIRUS; HUMAN; HUMAN CELL; NONHUMAN; PRIORITY JOURNAL; PROTEIN FUNCTION; PROTEIN TRANSPORT; REVERSE TRANSCRIPTION; VIRUS GENOME; VIRUS MUTANT;

CELL LINE; DNA, CIRCULAR; DNA, VIRAL; ENHANCER ELEMENTS (GENETICS); GENOME, VIRAL; HEPATITIS B VIRUS; HUMANS; MUTATION;

EID: 3142682433     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.78.14.7455-7464.2004     Document Type: Article

References (27)

1. Condreay, L. D., T. T. Wu, C. E. Aldrich, M. A. Delaney, J. Summers, C. Seeger, and W. S. Mason. 1992. Replication of DHBV genomes with mutations at the sites of initiation of minus- and plus-strand DNA synthesis. Virology 188:208-216.
2. Donello, J. E., A. A. Beeche, G. J. Smith III, G. R. Lucero, and T. J. Hope. 1996. The hepatitis B virus posttranscriptional regulatory element is composed of two subelements. J. Virol. 70:4345-4351.
3. Galibert, F., E. Mandart, F. Fitoussi, P. Tiollais, and P. Charnay. 1979. Nucleotide sequence of the hepatitis B virus genome (subtype ayw) cloned in E. coli. Nature 281:646-650.
4. Ganem, D., and R. Schneider. 2001. Hepadnaviridae: the viruses and their replication, 4th ed., vol. 2. Lippincott-Raven Publishers, Philadelphia, Pa.
5. Goff, S. 2001. Retroviridae: the retroviruses and their replication, p. 1871-1939. In P. M. Hawley and D. M. Knipe (ed.), Field's virology, 4th ed. Lippincott-Raven Publishers, Philadelphia, Pa.
6. Havert, M. B., L. Ji, and D. D. Loeb. 2002. Analysis of duck hepatitis B virus reverse transcription indicates a common mechanism for the two template switches during plus-strand DNA synthesis. J. Virol. 76:2763-2769.
7. Havert, M. B., and D. D. Loeb. 1997. cis-acting sequences in addition to donor and acceptor sites are required for template switching during synthesis of plus-strand DNA for duck hepatitis B virus. J. Virol. 71:5336-5344.
8. Hirsch, R. C., D. D. Loeb, J. R. Pollack, and D. Ganem. 1991. cis-acting sequences required for encapsidation of duck hepatitis B virus pregenomic RNA. J. Virol. 65:3309-3316.
9. Huang, Z. M., and T. S. Yen. 1995. Role of the hepatitis B virus posttranscriptional regulatory element in export of intronless transcripts. Mol. Cell. Biol. 15:3864-3869.
10. Jeong, J. K., G. S. Yoon, and W. S. Ryu. 2000. Evidence that the 5′-end cap structure is essential for encapsidation of hepatitis B virus pregenomic RNA. J. Virol. 74:5502-5508.
11. Junker-Niepmann, M., R. Bartenschlager, and H. Schaller. 1990. A short cis-acting sequence is required for hepatitis B virus pregenome encapsidation and sufficient for packaging of foreign RNA. EMBO J. 9:3389-3396.
12. Lee, J., H.-J. Lee, M.-K. Shin, and W.-S. Ryu. 2004. Versatile PCR-mediated insertion or deletion mutagenesis. BioTechniques 36:398-400.
13. Lien, J. M., C. E. Aldrich, and W. S. Mason. 1986. Evidence that a capped oligoribonucleotide is the primer for duck hepatitis B virus plus-strand DNA synthesis. J. Virol. 57:229-236.
14. Liu, N., L. Ji, M. L. Maguire, and D. D. Loeb. 2004. cis-acting sequences that contribute to the synthesis of relaxed-circular DNA of human hepatitis B virus. J. Virol. 78:642-649.
15. Liu, N., R. Tian, and D. D. Loeb. 2003. Base pairing among three cis-acting sequences contributes to template switching during hepadnavirus reverse transcription. Proc. Natl. Acad. Sci. USA 100:1984-1989.
16. Loeb, D. D., K. J. Gulya, and R. Tian. 1997. Sequence identity of the terminal redundancies on the minus-strand DNA template is necessary but not sufficient for the template switch during hepadnavirus plus-strand DNA synthesis. J. Virol. 71:152-160.
17. Loeb, D. D., K. C. Hirsch, and D. Ganem. 1991. Sequence-independent RNA cleavages generate the primers for plus strand DNA synthesis in hepatitis B viruses: implications for other reverse transcribing elements. EMBO J. 10:3533-3540.
18. Loeb, D. D., and R. Tian. 1995. Transfer of the minus strand of DNA during hepadnavirus replication is not invariable but prefers a specific location. J. Virol. 69:6886-6891.
19. Melegari, M., S. Bruno, and J. R. Wands. 1994. Properties of hepatitis B virus pre-S1 deletion mutants. Virology 199:292-300.
20. Melegari, M., P. P. Scaglioni, and J. R. Wands. 1997. The small envelope protein is required for secretion of a naturally occurring hepatitis B virus mutant with pre-S1 deleted. J. Virol. 71:5449-5454.
21. Nassal, M. 1992. The arginine-rich domain of the hepatitis B virus core protein is required for pregenome encapsidation and productive viral positive-strand DNA synthesis but not for virus assembly. J. Virol. 66:4107-4116.
22. Seeger, C., and J. Maragos. 1990. Identification and characterization of the woodchuck hepatitis virus origin of DNA replication. J. Virol. 64:16-23.
23. Sells, M. A., M. L. Chen, and G. Acs. 1987. Production of hepatitis B virus particles in Hep G2 cells transfected with cloned hepatitis B virus DNA. Proc. Natl. Acad. Sci. USA 84:1005-1009.
24. Smith, G. J., III, J. E. Donello, R. Luck, G. Steger, and T. J. Hope. 1998. The hepatitis B virus post-transcriptional regulatory element contains two conserved RNA stem-loops which are required for function. Nucleic Acids Res. 26:4818-4827.
25. Staprans, S., D. D. Loeb, and D. Ganem. 1991. Mutations affecting hepadnavirus plus-strand DNA synthesis dissociate primer cleavage from translocation and reveal the origin of linear viral DNA. J. Virol. 65:1255-1262.
26. Tavis, J. E., S. Perri, and D. Ganem. 1994. Hepadnavirus reverse transcription initiates within the stem-loop of the RNA packaging signal and employs a novel strand transfer. J. Virol. 68:3536-3543.
27. Wang, G. H., and C. Seeger. 1993. Novel mechanism for reverse transcription in hepatitis B viruses. J. Virol. 67:6507-6512.