Genetic characterization of three varieties of Astragalus lentiginosus (Fabaceae)

Brittonia

Volumn 57, Issue 4, 2005, Pages 334-344

  Knaus, Brian J ^a   Cronn, Rich C ^b   Liston, Aaron ^a  

^a OREGON STATE UNIVERSITY   (United States)

^b PACIFIC NORTHWEST RESEARCH STATION   (United States)

Author keywords

AFLP; Amplified fragment length polymorphism; Astragalus lentiginosus; Genetic differentiation; Infraspecific taxa

Indexed keywords

ASTRAGALUS LENTIGINOSUS; FABACEAE;

EID: 31144440826     PISSN: 0007196X     EISSN: None     Source Type: Journal    
DOI: 10.1663/0007-196X(2005)057[0334:GCOTVO]2.0.CO;2     Document Type: Article

References (35)

1. Abdelfattah, B., H. E. Shazly, H. E. Rabey & L. E. Watson. 2002. Systematic relationships in Lathyrus sect. Lathyrus (Fabaceae) based on amplified fragment length polymorphism (AFLP) data. Canadian Journal of Botany 80: 962-969.
2. Alexander, J. A. 2005. The taxonomic status of Astragalus mokiacensis (Fabaceae), a species endemic to southwestern United States. Brittonia 57: 320-333.
3. Allphin, L., N. Brian & T. Matheson. In press. Reproductive success and genetic divergence among varieties of the rare and endangered Astragalus cremnophylax (Fabaceae) from Arizona, USA. Conservation Genetics.
4. Barneby, R. C. 1945. Pugillus Astragalorum IV: the section Diplocystium. Leaflets of Western Botany 4: 65-147.
5. _. 1964. Atlas of North American Astragalus. Memoirs of The New York Botanical Garden 13: 911-958.
6. _. 1977. Dragma hippomanicum III: novitates Californicae. Brittonia 29: 376-381.
7. _. 1989. Astragalus lentiginosus. Pages 157-164. In: A. Cronquist, A. H. Holmgren, N. H. Holmgren, J. L. Reveal & P. K. Holmgren, editors. Intermountain Flora 3B. The New York Botanical Garden, New York.
8. Beardsley, P. M., A. Yen & R. G. Olmstead. 2003. AFLP phylogeny of Mimulus section Erythranthe and evolution of hummingbird pollination. Evolution 57: 1397-1410.
9. Brouat, C., D. McKey & E. J. P. Douzery. 2004. Differentiation in a geographical mosaic of plants coevolving with ants: phylogeny of the Leonardoxa africana complex (Fabaceae: Caesalpinioideae) using amplified fragment length polymorphism markers. Molecular Ecology 13: 1157-1171.
10. Chen, D. H. & P. C. Ronald. 1999. A rapid DNA minipreparation method suitable for AFLP and other PCR applications. Plant Molecular Biology Reporter 17: 53-57.
11. Dice, L. R. 1945. Measures of the amount of ecological association between species. Ecology 26: 297-302.
12. Excoffier, L., P. E. Smouse & J. M. Quattro. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: applications to human mitochondrial DNA restriction data. Genetics 131: 479-491.
13. Grayson, D. K. 1993. The desert's past. Smithsonian Institution Press, Washington, D.C.
14. He, T., S. L. Krauss, B. B. Lamont, B. P. Miller & N. L. Enright. 2004. Long-distance seed dispersal in a metapopulation of Banksia hookeriana inferred from a population allocation analysis of amplified fragment length polymorphism data. Molecular Ecology 13: 1099-1109.
15. Isely, D. 1998. Native and naturalized Leguminosae (Fabaceae) of the United States. Monte L. Bean Life Science Museum, Provo, Utah.
16. Jones, M. E. 1923. Revision of North American Astragalus. Published by the author. Salt Lake City, Utah.
17. Juan, A., M. B. Crespo, R. S. Cowan, C. Lexer & M. F. Fay. 2004. Patterns of variability and gene flow in Medicago citrina, an endangered endemic of islands in the western Mediterranean, as revealed by amplified fragment length polymorphism (AFLP). Molecular Ecology 13: 2679-2690.
18. Koopman, W. J. M. & G. Gort. 2004. Significance tests and weighted values for AFLP similarities, based on Arabidopsis in silico AFLP fragment length distributions. Genetics 167: 1915-1928.
19. Lamboy, W. F. 1994. Computing genetic similarity coefficients from RAPD data: the effects of PCR artifacts. PCR Methods and Applications 4: 31-37.
20. Liston, A. 1992. Variation in the chloroplast genes rpoC1 and rpoC2 of the genus Astragalus (Fabaceae): evidence from restriction site mapping of a PCR-amplified fragment. American Journal of Botany 79: 953-961.
21. Lynch, M. 1990. The similarity index and DNA fingerprinting. Molecular Biology and Evolution 7: 478-484.
22. Mueller, U. G. & L. L. Wolfenbarger. 1999. AFLP genotyping and fingerprinting. Trends in Ecology and Evolution 14: 389-394.
23. Peakall, R. & P. E. Smouse. 2001. GenAlEx V5: Genetic analysis in Excel. Australian National University, Canberra, Australia. http://www.anu.edu. au/BoZo/GenAlEx/.
24. Rinehart, T. A. 2004. AFLP analysis using Gene-Mapper® software and an Excel® macro that aligns and converts output to binary. Biotechniques 37: 186-188.
25. Rohlf, F. J. 2000. NTSYSpc v2.1. Exeter Software. Setauket, New York.
26. Rydberg, P. A. 1929. Astragalanae. North American Flora 24: 251-462.
27. Saito, N. & M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution. 4: 406-425.
28. Sanderson, M. J. & J. J. Doyle. 1993. Phylogenetic relationships in North American Astragalus (Fabaceae) based on chloroplast DNA restriction site variation. Systematic Botany 18: 395-408.
29. Spellenberg, R. 1976. Chromosome numbers and their cytotaxonomic significance for North American Astragalus (Fabaceae). Taxon 25: 463-476.
30. Travis, S. E., J. Maschinski & P. Keim. 1996. An analysis of genetic variation in Astragalus cremnophylax var. cremnophylax, a critically-endangered plant, using AFLP markers. Molecular Ecology 5: 735-745.
31. Vos, P., R. Hogers, M. Bleeker, M. Reijans, T. van de Lee, M. Hornes, A. Frijters, J. Pot, J. Peleman, M. Kuiper & M. Zabeau. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research 23: 4407-4414.
32. Welsh, S. L. 1981. New taxa of western plants-in tribute. Brittonia 33: 294-303.
33. Wojciechowski, M. F., M. J. Sanderson, B. G. Baldwin & M. J. Donoghue. 1993. Monophyly of aneuploid Astragalus (Fabaceae): evidence from nuclear ribosomal DNA internal transcribed spacer sequences. American Journal of Botany 80: 711-722.
34. _, _ & J.-M. Hu. 1999. Evidence on the monophyly of Astragalus (Fabaceae) and its major subgroups based on nuclear ribosomal DNA ITS and chloroplast DNA trnL intron data. Systematic Botany 24: 409-437.
35. Wolfe, A. D. & A. Liston. 1998. Contributions of PCR-based methods to plant systematics and evolutionary biology. Pages 43-86. In: D. E. Soltis, P. S. Soltis and J. J. Doyle, editors. Molecular systematics of plants II: DNA sequencing. Kluwer Academic, Boston, Massachusetts.