Development of an oligo-based microarray (μPEACH 1.0) for genomics studies in peach fruit

Acta Horticulturae

Volumn 682, Issue , 2005, Pages 263-268

  Bonghi, C ^a   Rasori, A ^a   Ramina, A ^a   Tonutti, P ^a   Zanin, D ^a   Casadoro, G ^a   Trainotti, L ^a   Barale, F ^b   Bianchi, F ^b   Cocucci, M ^b   Bassi, D ^b   Marrazzo, M T ^c   Cipriani, G ^c   Vecchietti, A ^d   Lazzari, B ^d   Pozzi, C ^d  

^a UNIVERSITY OF PADOVA   (Italy)

^b UNIVERSITY OF MILAN   (Italy)

^c UNIVERSITY OF UDINE   (Italy)

^d PARCO TECNOLOGICO PADANO   (Italy)

Author keywords

EST; Functional genomics; Gene expression profiling; Prunus spp.

Indexed keywords

EID: 30944438154     PISSN: 05677572     EISSN: None     Source Type: Book Series    
DOI: None     Document Type: Conference Paper

References (12)

1. Aharoni, A., Keizer, L. C. P., Bouwmeester, H. J., Sun, Z. K., Alvarez Huerta, M., Verhoeven, H. A., Blaas, J., Van Houwelingen, A., De Vos, R. C. H., Van Der Voet, H., Jansen, R. C., Guis, M., Mol, J., Davis, R. W., Schena, M., Van Tunen, A. J. and O'Connell, A. P. 2000. Identification of the SAAT gene involved in strawberry flavor biogenesis by use of DNA microarrays. Plant Cell 12:647-661.
2. Aharoni, A., Keizer, L. C. P., Van Den Broeck, H. C., Blanco-Portales, R., Munoz-Blanco, J., Bois, G., Smit, P., De Vos, R. C. H. and O'Connell, A. P. 2002. Novel insight into vascular, stress, and auxin-dependent and-independent gene expression programs in strawberry, a non-climacteric fruit. Plant Physiol. 129:1019-1031.
3. Aharoni, A. and Vorst, O. 2002 DNA microarrays for functional plant genomics. Plant Mol. Biol. 48:99-118.
4. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D. J. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
5. Brandle, J. E., Richman, A., Swanson, A. K. and Chapman, B. P., 2002. Leaf ESTs from Stevia rebaudiana: a resource for gene discovery in diterpene synthesis. Plant Mol. Biol. 50:613-622.
6. Fodor, S. P. A., Read, J. L., Pirrung, M. C., Stryer, L., Lu, A. T. and Solas, D. 1991. Lightdirected, spatially addressable parallel chemical synthesis. Science 251:767-773.
7. Fonseca, S., Hackòer, L. Jr., Zvara, A., Ferreira, S., Baldé, A., Dudits, D., Pais, M. S. and Puskas, L. G. 2004. Monitoring gene expression along pear fruit development, ripening and senescence using cDNA microarrays. Plant Science 167:457-469.
8. Pons, C., Royo, C., Forment, J., Gadea, J., Lluch, Y., Granell, A., Zacarias, L., Lafuente, M. T. and Kanellis, A. K. 2005. A customized Citrus cDNA microarray and its use in postharvest. Acta Hort. 682:225-232.
9. Schena, M., Shalon, D., Davis, R. W. and Brown, P. O. 1995. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270:467-470.
10. Tonutti, P., Bonghi, C., Ruperti, B., Tornelli, G. B. and Ramina, A. 1997. Ethylene evolution and 1-aminocyclopropane-1-carboxylate oxidase gene expression during early development and ripening of peach fruit. J. Amer. Soc. Hortic. Sci. 122:642-647.
11. Trainotti, L., Zanin, D. and Casadoro, G. 2003. A cell wall-oriented genomic approach reveals a new and unexpected complexity of the softening in peaches. J. Exp. Bot. 54:1821-1832.
12. Van Der Hoeven, R., Ronning, C., Giovannoni, J., Martin, G. and Tanksley, S. 2002. Deductions about the number, organization, and evolution of genes in the tomato genome based on analysis of a large expressed sequence tag collection and selective genomic sequencing. Plant Cell 14:1441-1456.