Evolution of ORF5 of Spanish porcine reproductive and respiratory syndrome virus strains from 1991 to 2005

Virus Research

Volumn 115, Issue 2, 2006, Pages 198-206

  Mateu, E ^a,b   Diaz I ^a,b   Darwich, L ^a,b   Casal, J ^a,b   Martin M ^a,b   Pujols, J ^b  

^a UNIVERSITAT AUTÒNOMA DE BARCELONA   (Spain)

^b CENTRE DE RECERCA EN SANITAT ANIMAL CRESA   (Spain)

Author keywords

Codon usage; Genetic diversity; ORF5; Porcine reproductive and respiratory virus

Indexed keywords

GLYCOPROTEIN;

ARTERIVIRUS; ARTICLE; CODON USAGE; GENE EXPRESSION; GENETIC VARIABILITY; GLYCOSYLATION; HYDROPHOBICITY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SWINE; UNINDEXED SEQUENCE; VIRAL GENETICS; VIRUS ISOLATION; VIRUS MUTATION; VIRUS STRAIN;

ADAPTATION, BIOLOGICAL; AMINO ACID SEQUENCE; CODON; DNA, VIRAL; EVOLUTION, MOLECULAR; GLYCOSYLATION; MOLECULAR SEQUENCE DATA; MUTATION; PHYLOGENY; POLYMORPHISM, GENETIC; PORCINE REPRODUCTIVE AND RESPIRATORY SYNDROME; PORCINE RESPIRATORY AND REPRODUCTIVE SYNDROME VIRUS; PROTEIN STRUCTURE, TERTIARY; SELECTION (GENETICS); SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; SPAIN; VIRAL PROTEINS;

ARTERIVIRUS; LELYSTAD VIRUS; PORCINE RESPIRATORY AND REPRODUCTIVE SYNDROME VIRUS; SUIDAE; SUS SCROFA;

EID: 30644457874     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.virusres.2005.09.008     Document Type: Article

References (24)

1. C. Castro, J.J. Arnold, and C.E. Cameron Incorporation fidelity of the viral RNA-dependent RNA polymerase: a kinetic, thermodynamic and structural perspective Virus Res. 107 2005 141 149
2. Z. Chen, K. Li, R.R. Rowland, and P.G. Plagemann Neuropathogenicity and susceptibility to immune response are interdependent properties of lactate dehydrogenase-elevating virus (LDV) and correlate with the number of N-linked polylactosaminoglycan chains on the ectodomain of the primary envelope glycoprotein Adv. Exp. Med. Biol. 440 1998 583 592
3. R.F. Cook, S.J. Cook, P.S. Bolin, L.J. Howe, W. Zhou, R.C. Montelaro, and C.J. Issel Genetic immunization with codon-optimized equine infectious anemia virus (EIAV) surface unit (SU) envelope protein gene sequences stimulates immune responses in ponies Vet. Microbiol. 108 2005 23 37
4. Y. Fang, D.Y. Kim, S. Ropp, P. Steen, J. Christopher-Hennings, E.A. Nelson, and R.R. Rowland Heterogeneity in Nsp2 of European-like porcine reproductive and respiratory syndrome viruses isolated in the United States Virus Res. 100 2004 229 235
5. R. Forsberg, M.B. Oleksiewicz, A.M. Petersen, J. Hein, A. Botner, and T. Storgaard A molecular clock dates the common ancestor of European-type porcine reproductive and respiratory syndrome virus at more than 10 years before the emergence of disease Virology 289 2001 174 179
6. R. Forsberg, T. Storgaard, H.S. Nielsen, M.B. Oleksiewicz, P. Cordioli, G. Sala, J. Hein, and A. Botner The genetic diversity of European type PRRSV is similar to that of the North American type but is geographically skewed within Europe Virology 299 2002 38 47
7. P. Gonin, B. Pirzadeh, C.A. Gagnon, and S. Dea Seroneutralization of porcine reproductive and respiratory syndrome virus correlates with antibody response to the GP5 major envelope glycoprotein J. Vet. Diagn. Invest. 11 1999 20 26
8. K. Hanada, Y. Suzuki, T. Nakane, O. Hirose, and T. Gojobori The origin and evolution of porcine reproductive and respiratory syndrome viruses Mol. Biol. E 22 2005 1024 1031
9. A. Kheyar, A. Jabrane, C. Zhu, P. Cleroux, B. Massie, S. Dea, and C.A. Gagnon Alternative codon usage of PRRS virus ORF5 gene increases eucaryotic expression of GP(5) glycoprotein and improves immune response in challenged pigs Vaccine 23 2005 4016 4022
10. E. Mateu, M. Martin, and D. Vidal Genetic diversity and phylogenetic analysis of glycoprotein 5 of European-type porcine reproductive and respiratory virus strains in Spain J. Gen. Virol. 84 2003 529 534
11. X.J. Meng, P.S. Paul, and P.G. Halbur Molecular cloning and nucleotide sequencing of the 3′-terminal genomic RNA of the porcine reproductive and respiratory syndrome virus J. Gen. Virol. 75 1994 1795 1801
12. M.B. Oleksiewicz, A. Botner, P. Toft, T. Grubbe, J. Nielsen, S. Kamstrup, and T. Storgaard Emergence of porcine reproductive and respiratory syndrome virus deletion mutants: correlation with the porcine antibody response to a hypervariable site in the ORF 3 structural glycoprotein Virology 267 2000 135 140
13. M. Ostrowski, J.A. Galeota, A.M. Jar, K.B. Platt, F.A. Osorio, and O.J. Lopez Identification of neutralizing and nonneutralizing epitopes in the porcine reproductive and respiratory syndrome virus GP5 ectodomain J. Virol. 76 2002 4241 4250
14. S. Pesch, C. Meyer, and V.F. Ohlinger New insights into the genetic diversity of European porcine reproductive and respiratory syndrome virus (PRRSV) Vet. Microbiol. 107 2005 31 48
15. B. Pirzadeh, C.A. Gagnon, and S. Dea Genomic and antigenic variations of porcine reproductive and respiratory syndrome virus major envelope GP5 glycoprotein Can. J. Vet. Res. 62 1998 170 177
16. P.G. Plagemann Porcine reproductive and respiratory virus: origin hypothesis Emerg. Infect. Dis. 9 2003 903 905
17. P.G. Plagemann GP5 ectodomain epitope of porcine reproductive and respiratory syndrome virus, strain Lelystad virus Virus Res. 102 2004 225 230
18. P.G. Plagemann The primary GP5 neutralization epitope of North American isolates of porcine reproductive and respiratory syndrome virus Vet. Immunol. Immunopathol. 102 2004 263 275
19. P. Suárez, R. Zardoya, M.J. Martin, C. Prieto, J. Dopazo, A. Solana, and J.M. Castro Phylogenetic relationships of european strains of porcine reproductive and respiratory syndrome virus (PRRSV) inferred from DNA sequences of putative ORF-5 and ORF-7 genes Virus Res. 42 1996 159 165
20. E.J. Snijder, J.C. Dobbe, and W.J. Spaan Heterodimerization of the two major envelope proteins is essential for arterivirus infectivity J. Virol. 77 2003 97 104
21. E.J. Snijder, and J.J. Meulenberg The molecular biology of arteriviruses J. Gen. Virol. 79 1998 961 979
22. J.D. Thompson, D.G. Higgins, and T.J. Gibson CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res. 22 1994 4673 4680
23. E.H. Wissink, M.V. Kroese, J.G. Maneschijn-Bonsing, J.J. Meulenberg, P.A. van Rijn, F.A. Rijsewijk, and P.J. Rottier Significance of the oligosaccharides of the porcine reproductive and respiratory syndrome virus glycoproteins GP2a and GP5 for infectious virus production J. Gen. Virol. 85 2004 3715 3723
24. Wu, W.H., Fang. Y., Rowland. R.R., Lawson, S.R., Christopher-Hennings, J., Yoon, K.J., Nelson, E.A., 2005. The 2b protein as a minor structural component of PRRSV. Virus Res [Epub ahead of print August 10].