Analysis of heartbeat dynamics by point process adaptive filtering

IEEE Transactions on Biomedical Engineering

Volumn 53, Issue 1, 2006, Pages 4-12

  Barbieri, Riccardo ^a,c   Brown, Emery N ^a,b,c  

^a MASSACHUSETTS GENERAL HOSPITAL   (United States)

^b MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^c HARVARD MEDICAL SCHOOL   (United States)

Author keywords

Adaptive filters; Heart rate variability; Point processes; State estimation

Indexed keywords

HEART RATE VARIABILITY; POINT PROCESSES;

ADAPTIVE FILTERING; ALGORITHMS; DATA REDUCTION; MATHEMATICAL MODELS; STATE ESTIMATION; TIME SERIES ANALYSIS;

CARDIOVASCULAR SYSTEM;

ADAPTIVE FILTERING; ALGORITHM; ARTICLE; CONGESTIVE HEART FAILURE; DYNAMICS; HEART BEAT; HEART RATE VARIABILITY; HUMAN; METHODOLOGY; MODEL; NORMAL DISTRIBUTION; SIMULATION; STATISTICAL ANALYSIS; STATISTICAL MODEL; TILT TABLE TEST;

ALGORITHMS; COMPUTER SIMULATION; DATA INTERPRETATION, STATISTICAL; DIAGNOSIS, COMPUTER-ASSISTED; ELECTROCARDIOGRAPHY; FEMALE; HEART FAILURE, CONGESTIVE; HEART RATE; HUMANS; MALE; MODELS, CARDIOVASCULAR; MODELS, STATISTICAL; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SIGNAL PROCESSING, COMPUTER-ASSISTED;

EID: 30444438056     PISSN: 00189294     EISSN: None     Source Type: Journal    
DOI: 10.1109/TBME.2005.859779     Document Type: Article

References (45)

1. M. Malik and A. Camm, and Members of the Task Force, "Heart rate variability: standards of measurement, physiological interpretation, and clinical use," Circulation, vol. 93, pp. 1043-1065, 1996.
2. S. Akselrod, D. Gordon, F. A. Ubel, D. C. Shannon, A. C. Berger, and R. J. Cohen, "Power spectrum analysis of heart rate fluctuation: a quantitative probe of beat-to-beat cardiovascular control," Science, vol. 213, pp. 220-222, 1981.
3. M. Pagani, G. Malfatto, S. Pierini, R. Casati, A. Masu, M. Poli, S. Guzzetti, F. Lombardi, S. Cerutti, and A. Malliani, "Spectral analysis of heart rate variability in the assessment of autonomic diabetic neuropathy," J. Auton. Nerv. Syst., vol. 23, pp. 143-153, 1988.
4. R. Barbieri, A. M. Bianchi, J. K. Triedman, L. T. Mainardi, S. Cerutti, and J. P. Saul, "Model dependency of multivariate autoregressive spectral analysis: quantifying cardiovascular control using bivariate and trivariate models," IEEE Eng. Med. Biol. Mag., vol. 16, no. 5, pp. 74-85, Sep.-Oct. 1997.
5. R. Barbieri, R. A. Waldmann, V. Di Virgilio, J. K. Triedman, A. M. Bianchi, S. Cerutti, and J. P. Saul, "Continuous quantification of baroreflex and respiratory control of heart rate by use of bivariate autoregressive techniques," Ann. Noninvasive Electrocardiol., vol. 1, pp. 264-277, 1996.
6. A. M. Bianchi, L. Mainardi, E. Petrucci, M. G. Signorini, M. Mainardi, and S. Cerutti, "Time-variant power spectrum analysis for the detection of transient episodes in HRV signal," IEEE Trans. Biomed. Eng., vol. 40, no. 2, pp. 136-144, Feb. 1993.
7. S. Cerutti, G. Baselli, A. M. Bianchi, L. T. Mainardi, M. G. Signorini, and A. Malliani, "Cardiovascular variability signals: from signal processing to modeling complex physiological interactions," Automedica, vol. 16, pp. 45-69, 1994.
8. J. P. Saul, R. D. Berger, P. Albrecht, S. P. Stein, M. H. Chen, and R. J. Cohen, "Transfer function analysis of the circulation: unique insights into cardiovascular regulation," Am. J. Physiol. Heart Circ. Physiol., vol. 261, pp. H1231-H1245, 1991.
9. P. C. Ivanov, L. A. Amaral, A. L. Goldberger, S. Havlin, M. G. Rosenblum, Z. R. Struzik, and H. E. Stanley, "Multifractality in human heartbeat dynamics," Nature, vol. 399, pp. 461-465, 1999.
10. P. C. Ivanov, M. G. Rosenblum, C. K. Peng, J. Mietus, S. Havlin, H. E. Stanley, and A. L. Goldberger, "Scaling behavior of heartbeat intervals obtained by wavelet-based time-series analysis," Nature, vol. 383, pp. 323-327, 1996.
11. C. S. Poon and C. K. Merrill, "Decrease of cardiac chaos in congestive heart failure," Nature, vol. 389, pp. 492-495, 1997.
12. G. Sugihara, W. Allan, D. Sobel, and K. D. Allan, "Nonlinear control of heart rate variability in human infants," Proc. Nat. Acad. Sci., vol. 93, pp. 2608-2613, 1996.
13. S. M. Pincus and A. L. Goldberger, "Physiological time-series analysis: what does regularity quantify?," Am. J. Physiol., vol. 266, pp. H1643-H1656, 1994.
14. J. Hayano, J. A. Taylor, A. Yamada, S. Mukai, R. Hori, T. Asakawa, K. Yokoyama, Y. Watanabe, K. Takata, and T. Fujinami, "Continuous assessment of hemodynamic control by complex demodulation of cardiovascular variability," Am. J. Physiol. Heart. Circ. Physiol., vol. 264, pp. H1229-H1238, 1993.
15. S. Joho, H. Asanoi, H. A. Remah, A. Igawa, T. Kameyama, T. Nozawa, K. Umeno, and H. Inoue, "Time-varying spectral analysis of heart rate and left ventricular pressure variability during balloon coronary occlusion in humans: a sympathoexcitatory response to myocardial ischemia," J. Am. Coll. Cardiol., vol. 34, pp. 1924-1931, 1999.
16. Y. Kimura, K. Okamura, T. Watanabe, N. Yaegashi, S. Uehara, and A. Yajima, "Time-frequency analysis of fetal heartbeat fluctuation using wavelet transform," Am. J. Physiol. Heart Circ. Physiol., vol. 275, pp. H1993-H1999, 1998.
17. V. Novak, P. Novak, J. de Champlain, A. R. Le Blanc, R. Martin, and R. Nadeau, "Influence of respiration on heart rate and blood pressure fluctuations," J. Appl. Physiol., vol. 74, pp. 617-626, 1993.
18. E. Toledo, O. Gurevitz, H. Hod, M. Eldar, and S. Akselrod, "Wavelet analysis of instantaneous heart rate: a study of autonomic control during thrombolysis," Am. J. Physiol. Regul. Integr. Comp. Physiol., vol. 284, pp. R1079-R1091, 2003.
19. V. Pichot, J. M. Gaspoz, S. Molliex, A. Antoniadis, T. Busso, F. Roche, F. Costes, L. Quintin, J. R. Lacour, and J. C. Barthelemy, "Wavelet transform to quantify heart rate variability and to assess its instantaneous changes," J. Appl. Physiol., vol. 86, pp. 1081-1091, 1999.
20. Y. Yamamoto and R. L. Hughson, "Coarse graining spectral analysis: new method for studying heart rate variability," J Appl Physiol, vol. 71, pp. 1143-1150, 1991.
21. L. T. Mainardi, A. M. Bianchi, G. Baselli, and S. Cerutti, "Pole-tracking algorithms for the extraction of time-variant heart rate variability spectral parameters," IEEE Trans. Biomed. Eng., vol. 42, no. 3, pp. 250-259, Mar. 1995.
22. E. N. Brown, D. A. Nguyen, L. M. Frank, M. A. Wilson, and V. Solo, "An analysis of neural receptive field plasticity by point process adaptive filtering," Proc. Nat. Acad. Sci., vol. 98, pp. 12261-12266, 2001.
23. R. Barbieri, L. M. Frank, D. P. Nguyen, M. C. Quirk, V. Solo, and E. N. Brown, "Dynamic analyses of information encoding in neural ensem-bles," Neural Computation, vol. 16, pp. 277-307, 2004.
24. U. T. Eden, L. M. Frank, R. Barbieri, V. Solo, M. A. Wilson, and E. N. Brown, "Dynamic analysis of neural encoding by point process adaptive filtering," Neural Computation, vol. 16, pp. 971-998, 2004.
25. R. Barbieri, E. C. Matten, A. A. Alabi, and E. N. Brown, "A point process model of human heart rate intervals: new definitions of heart rate and heart rate variability," Am. J. Physiol. Heart. Circ. Physiol., vol. 288, pp. H424-4H35, 2005.
26. E. N. Brown, R. Barbieri, V. Ventura, R. E. Kass, and L. M. Frank, "The time-rescaling theorem and its application to neural spike train data analysis," Neural Computation, vol. 14, pp. 325-346, 2002.
27. A. C. Guyton, Textbook of Medical Physiology, 8th ed, PA: Harcourt Brace, 1991.
28. R. W. De Boer, J. M. Karemaker, and J. Strackee, "Spectrum of a series of point event, generated by the integral pulse frequency modulation model," Med. Biol. Eng. Comput., vol. 23, pp. 138-142, 1985.
29. R. D. Berger, S. Akselrod, D. Gordon, and R. J. Cohen, "An efficient algorithm for spectral analysis of heart rate variability," IEEE Trans. Biomed. Eng., vol. BME-33, pp. 900-904, 1986.
30. H. C. Tuckwell, Introduction to Theoretical Neurobiology. New York: Cambridge Univ. Press, 1988, vol. 2, Nonlinear and Stochastic Theories.
31. G. B. Stanley, K. Poolla, and R. A. Siegel, "Threshold modeling of autonomic control of heart rate variability," IEEE Trans. Biomed. Eng., vol. 47, no. 9, pp. 1147-1153, Sep. 2000.
32. R. J. L. Leor-Librach, S. Eliash, E. Kaplinsky, and B. Bobrovsky, "Very low-frequency heart rate variability wave amplitude and sympathetic stimulation-characterization and modeling," IEEE Trans. Biomed. Eng., vol. 50, no. 7, pp. 797-803, Jul. 2003.
33. K. L. Fernando, V. J. Mathews, M. W. Varner, and E. B. Clark, "Robust estimation of fetal heart rate variability using Doppler ultrasound," IEEE Trans. Biomed. Eng., vol. 50, no. 8, pp. 950-957, Aug. 2003.
34. S. R. Seydnejad and R. Kitney, "Real-time heart rate variability extraction using the Kaiser window," IEEE Trans. Biomed. Eng., vol. 44, no. 10, pp. 990-1005, Oct. 1997.
35. J. Mateo and P. Laguna, "Analysis of heart rate variability in the presence of ectopic beats using the heart timing signal," IEEE Trans. Biomed. Eng., vol. 50, no. 3, pp. 334-343, Mar. 2003.
36. R. S. Chhikara and J. L. Folks, The Inverse Gaussian Distribution: Theory, Methodology, and Applications. New York: Marcel Dekker, 1989.
37. E. N. Brown, R. Barbieri, U. T. Eden, and L. M. Frank, "Likelihood methods for neural data analysis," in Computational Neuroscience: A Comprehensive Approach, J. Feng, Ed. London, U.K.: Chapman & Hall, 2003, ch. 9, pp. 253-286.
38. G. Kitagawa and W. Gersh, Smoothness Priors Analysis of Time Series. New York: Springer, 1996.
39. J. M. Mendel, Lessons in Estimation Theory for Signal Processing, Communications, and Control. Englewood Cliffs, NJ: Prentice-Hall, 1995.
40. T. Heldt, E. B. Shim, R. D. Kamm, and R. G. Mark, "Computational modeling of cardiovascular response to orthostatic stress," J. Appl. Physiol., vol. 92, pp. 1239-1254, 2002.
41. T. Heldt, M. B. Oefinger, M. Hoshiyama, and R. G. Mark, "Circulatory response to passive and active changes in posture," in Proc. Computers in Cardiology, 2003, pp. 263-266.
42. A. L. Goldberger, L. A. N. Amaral, L. Glass, J. M. Hausdorff, P. C. Ivanov, R. G. Mark, J. E. Mietus, G. B. Moody, C. K. Peng, and H. E. Stanley, "PhysioBank, PhysioToolkit, and PhysioNet: components of a new research resource for complex physiologic signals," Circulation. vol. 101, no. 23, pp. e215-e220, Jun. 2000.
43. G. E. P. Box, G. M. Jenkins, and G. C. Reinsel, Time Series Analysis, Forecasting and Control, 3rd ed. Englewood Cliffs, NJ: Prentice-Hall, 1994.
44. A. C. Smith and E. N. Brown, "Estimating a state-space model from point process observations," Neural Computation, vol. 15, pp. 965-991, 2003.
45. L. T. Mainardi, A. M. Bianchi, R. Furlan, S. Piazza, R. Barbieri, V. Di Virgilio, A. Malliani, and S. Cerutti, "Multivariate time-variant identification of cardiovascular variability signals: a beat-to-beat spectral parameter estimation in vasovagal syncope," IEEE Trans. Biomed. Eng., vol. 44, no. 10, pp. 978-989, Oct. 1997.