메뉴 건너뛰기




Volumn 64, Issue 13, 2004, Pages 4434-4441

Microarray and serial analysis of gene expression analyses identify known and novel transcripts overexpressed in hematopoietic stem cells

Author keywords

[No Author keywords available]

Indexed keywords

CD34 ANTIGEN; CD38 ANTIGEN; TRANSCRIPTION FACTOR;

EID: 3042820902     PISSN: 00085472     EISSN: None     Source Type: Journal    
DOI: 10.1158/0008-5472.CAN-03-3247     Document Type: Article
Times cited : (111)

References (57)
  • 1
    • 9444269823 scopus 로고    scopus 로고
    • Highly purified CD34-positive cells reconstitute hematopoiesis
    • Civin CI, Trischmann T, Kadan NS, et al. Highly purified CD34-positive cells reconstitute hematopoiesis. J Clin Oncol 1996;14:2224-33.
    • (1996) J Clin Oncol , vol.14 , pp. 2224-2233
    • Civin, C.I.1    Trischmann, T.2    Kadan, N.S.3
  • 2
    • 16144365969 scopus 로고    scopus 로고
    • Identification of primitive human hematopoietic cells capable of repopulating NOD/SCID mouse bone marrow: Implications for gene therapy
    • Larochelle A, Vormoor J, Hanenberg H, et al. Identification of primitive human hematopoietic cells capable of repopulating NOD/SCID mouse bone marrow: implications for gene therapy. Nat Med 1996;2:1329-37.
    • (1996) Nat Med , vol.2 , pp. 1329-1337
    • Larochelle, A.1    Vormoor, J.2    Hanenberg, H.3
  • 4
    • 0021250078 scopus 로고
    • Antigenic analysis of hematopoiesis. III. A hematopoietic progenitor cell surface antigen defined by a monoclonal antibody raised against KG-1a cells
    • Civin CI, Strauss LC, Brovall C, Fackler MJ, Schwartz JF, Shaper JH. Antigenic analysis of hematopoiesis. III. A hematopoietic progenitor cell surface antigen defined by a monoclonal antibody raised against KG-1a cells. J Immunol 1984;133:157-65.
    • (1984) J Immunol , vol.133 , pp. 157-165
    • Civin, C.I.1    Strauss, L.C.2    Brovall, C.3    Fackler, M.J.4    Schwartz, J.F.5    Shaper, J.H.6
  • 5
    • 0031671642 scopus 로고    scopus 로고
    • A newly discovered class of human hematopoietic cells with SCID-repopulating activity
    • Bhatia M, Bonnet D, Murdoch B, Gan OI, Dick JE. A newly discovered class of human hematopoietic cells with SCID-repopulating activity. Nat Med 1998;4:1038-45.
    • (1998) Nat Med , vol.4 , pp. 1038-1045
    • Bhatia, M.1    Bonnet, D.2    Murdoch, B.3    Gan, O.I.4    Dick, J.E.5
  • 6
    • 0034595656 scopus 로고    scopus 로고
    • The genetic program of hematopoietic stem cells
    • Phillips RL, Ernst RE, Brunk B, et al. The genetic program of hematopoietic stem cells. Science (Wash. DC) 2000;288:1635-40.
    • (2000) Science (Wash. DC) , vol.288 , pp. 1635-1640
    • Phillips, R.L.1    Ernst, R.E.2    Brunk, B.3
  • 7
    • 0034945086 scopus 로고    scopus 로고
    • From hematopoiesis to neuropoiesis: Evidence of overlapping genetic programs
    • Terskikh AV, Easterday MC, Li L, et al. From hematopoiesis to neuropoiesis: evidence of overlapping genetic programs. Proc Natl Acad Sci USA 2001;98:7934-9.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 7934-7939
    • Terskikh, A.V.1    Easterday, M.C.2    Li, L.3
  • 8
    • 0037079712 scopus 로고    scopus 로고
    • Differential gene expression profiling of adult murine hematopoietic stem cells
    • Park IK, He Y, Lin F, et al. Differential gene expression profiling of adult murine hematopoietic stem cells. Blood 2002;99:488-98.
    • (2002) Blood , vol.99 , pp. 488-498
    • Park, I.K.1    He, Y.2    Lin, F.3
  • 9
    • 0037438387 scopus 로고    scopus 로고
    • Transcriptional accessibility for genes of multiple tissues and hematopoietic lineages is hierarchically controlled during early hematopoiesis
    • Akashi K, He X, Chen J, et al. Transcriptional accessibility for genes of multiple tissues and hematopoietic lineages is hierarchically controlled during early hematopoiesis. Blood 2003;101:383-9.
    • (2003) Blood , vol.101 , pp. 383-389
    • Akashi, K.1    He, X.2    Chen, J.3
  • 10
    • 0037085805 scopus 로고    scopus 로고
    • Gene expression profiling identifies significant differences between the molecular phenotypes of bone marrow-derived and circulating human CD34+ hematopoietic stem cells
    • Steidl U, Kronenwett R, Rohr UP, et al. Gene expression profiling identifies significant differences between the molecular phenotypes of bone marrow-derived and circulating human CD34+ hematopoietic stem cells. Blood 2002;99:2037-44.
    • (2002) Blood , vol.99 , pp. 2037-2044
    • Steidl, U.1    Kronenwett, R.2    Rohr, U.P.3
  • 13
    • 0242367242 scopus 로고    scopus 로고
    • Comment on "'Stemness': Transcriptional profiling of embryonic and adult stem cells" and "a stem cell molecular signature"
    • author reply 393
    • Fortunel NO, Otu HH, Ng HH, et al. Comment on "'Stemness': transcriptional profiling of embryonic and adult stem cells" and "a stem cell molecular signature." Science (Wash. DC) 2003;302:393; author reply 393.
    • (2003) Science (Wash, DC) , vol.302 , pp. 393
    • Fortunel, N.O.1    Otu, H.H.2    Ng, H.H.3
  • 14
    • 0242272438 scopus 로고    scopus 로고
    • Comment on "'Stemness': Transcriptional profiling of embryonic and adult stem cells" and "a stem cell molecular signature"
    • author reply 393
    • Evsikov AV, Solter D. Comment on "'Stemness': transcriptional profiling of embryonic and adult stem cells" and "a stem cell molecular signature". Science (Wash. DC) 2003;302:393; author reply 393.
    • (2003) Science (Wash. DC) , vol.302 , pp. 393
    • Evsikov, A.V.1    Solter, D.2
  • 15
    • 0142052965 scopus 로고    scopus 로고
    • Stem cells. 'Stemness' genes still elusive
    • Vogel G, Stem cells. 'Stemness' genes still elusive. Science (Wash. DC) 2003;302:371.
    • (2003) Science (Wash. DC) , vol.302 , pp. 371
    • Vogel, G.1
  • 16
    • 0029860155 scopus 로고    scopus 로고
    • Sustained, retransplantable, multilineage engraftment of highly purified adult human bone marrow stem cells in vivo
    • Civin CI, Almeida-Porada G, Lee MJ, Olweus J, Terstappen LW, Zanjani ED. Sustained, retransplantable, multilineage engraftment of highly purified adult human bone marrow stem cells in vivo. Blood 1996;88:4102-9.
    • (1996) Blood , vol.88 , pp. 4102-4109
    • Civin, C.I.1    Almeida-Porada, G.2    Lee, M.J.3    Olweus, J.4    Terstappen, L.W.5    Zanjani, E.D.6
  • 17
    • 0034955676 scopus 로고    scopus 로고
    • Human CD34+ cell preparations contain over 100-fold greater NOD/SCID mouse engrafting capacity than do CD34- cell preparations
    • Gao Z, Fackler MJ, Leung W, et al. Human CD34+ cell preparations contain over 100-fold greater NOD/SCID mouse engrafting capacity than do CD34- cell preparations. Exp Hematol 2001;29:910-21.
    • (2001) Exp Hematol , vol.29 , pp. 910-921
    • Gao, Z.1    Fackler, M.J.2    Leung, W.3
  • 18
    • 0032603279 scopus 로고    scopus 로고
    • Quantity and quality of engrafting cells in cord blood and autologous mobilized peripheral blood
    • Leung W, Ramirez M, Civin CI. Quantity and quality of engrafting cells in cord blood and autologous mobilized peripheral blood. Biol Blood Marrow Transplant 1999;5:69-76.
    • (1999) Biol Blood Marrow Transplant , vol.5 , pp. 69-76
    • Leung, W.1    Ramirez, M.2    Civin, C.I.3
  • 22
    • 3042853652 scopus 로고    scopus 로고
    • Nonparametric inference for stochastic linear hypotheses: Application to high-dimensional data
    • In press
    • Kowalski J, Powell J. Nonparametric inference for stochastic linear hypotheses: application to high-dimensional data. Bioinformatics. In press 2004.
    • (2004) Bioinformatics
    • Kowalski, J.1    Powell, J.2
  • 23
    • 1342330540 scopus 로고    scopus 로고
    • Nonparametric, hypothesis-based analysis of microarrays for comparison of several phenotypes
    • Kowalski J, Drake C, Schwartz RH, Powell J. Nonparametric, hypothesis-based analysis of microarrays for comparison of several phenotypes. Bioinformatics 2004; 20:364-73.
    • (2004) Bioinformatics , vol.20 , pp. 364-373
    • Kowalski, J.1    Drake, C.2    Schwartz, R.H.3    Powell, J.4
  • 26
    • 0034352940 scopus 로고    scopus 로고
    • POWER SAGE: Comparing statistical tests for SAGE experiments
    • Man MZ, Wang X, Wang Y. POWER SAGE: comparing statistical tests for SAGE experiments. Bioinformatics 2000;16:953-9.
    • (2000) Bioinformatics , vol.16 , pp. 953-959
    • Man, M.Z.1    Wang, X.2    Wang, Y.3
  • 27
    • 0038313118 scopus 로고
    • Strong-association-rule mining for large-scale gene-expression data analysis: A case study on human SAGE data
    • [cited]:[about 16 p.]
    • Becquet C, Blachon S, Jeudy B, Boulicaut JF, Gandrillon O. Strong-association-rule mining for large-scale gene-expression data analysis: a case study on human SAGE data. Genome Biol [serial on the Internet]. 1979 [cited 2003];3:[about 16 p.]. Available from: http://genomebiology.com/2002/3/12/ research/0067.
    • (1979) Genome Biol [Serial on the Internet] , vol.3
    • Becquet, C.1    Blachon, S.2    Jeudy, B.3    Boulicaut, J.F.4    Gandrillon, O.5
  • 28
    • 0037195213 scopus 로고    scopus 로고
    • Statistical evaluation of SAGE libraries: Consequences for experimental design
    • Ruijter JM, Van Kampen AH, Baas F. Statistical evaluation of SAGE libraries: consequences for experimental design. Physiol Genomics 2002;11:37-44.
    • (2002) Physiol Genomics , vol.11 , pp. 37-44
    • Ruijter, J.M.1    Van Kampen, A.H.2    Baas, F.3
  • 29
    • 0036484937 scopus 로고    scopus 로고
    • Differential gene expression in premalignant human epidermis revealed by cluster analysis of serial analysis of gene expression (SAGE) libraries
    • van Ruissen F, Jansen BJ, de Jongh GJ, van Vlijmen-Willems IM, Schalkwijk J. Differential gene expression in premalignant human epidermis revealed by cluster analysis of serial analysis of gene expression (SAGE) libraries. FASEB J 2002;16:246-8.
    • (2002) FASEB J , vol.16 , pp. 246-248
    • Van Ruissen, F.1    Jansen, B.J.2    De Jongh, G.J.3    Van Vlijmen-Willems, I.M.4    Schalkwijk, J.5
  • 30
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 2001:25:402-8.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 32
    • 0034744101 scopus 로고    scopus 로고
    • C/EBPalpha and G-CSF receptor signals cooperate to induce the myeloperoxidase and neutrophil elastase genes
    • Wang W, Wang X, Ward AC, Touw IP, Friedman AD. C/EBPalpha and G-CSF receptor signals cooperate to induce the myeloperoxidase and neutrophil elastase genes. Leukemia (Baltimore) 2001;15:779-86.
    • (2001) Leukemia (Baltimore) , vol.15 , pp. 779-786
    • Wang, W.1    Wang, X.2    Ward, A.C.3    Touw, I.P.4    Friedman, A.D.5
  • 33
    • 0030068201 scopus 로고    scopus 로고
    • Regulation of immature myeloid cell differentiation by PEBP2/CBF, Myb, C/EBP and Ets family members
    • Friedman AD. Regulation of immature myeloid cell differentiation by PEBP2/CBF, Myb, C/EBP and Ets family members. Curr Top Microbiol Immunol 1996;211:149-57.
    • (1996) Curr Top Microbiol Immunol , vol.211 , pp. 149-157
    • Friedman, A.D.1
  • 34
    • 0030271491 scopus 로고    scopus 로고
    • The murine myeloperoxidase gene contains a bipartite distal enhancer, including a novel region regulated by PEBP2/CBF
    • Friedman AD, Britos-Bray M, Suzow J. The murine myeloperoxidase gene contains a bipartite distal enhancer, including a novel region regulated by PEBP2/CBF. Leuk Res 1996;20:809-15.
    • (1996) Leuk Res , vol.20 , pp. 809-815
    • Friedman, A.D.1    Britos-Bray, M.2    Suzow, J.3
  • 35
    • 0033597908 scopus 로고    scopus 로고
    • Lung Kruppel-like factor, a zinc finger transcription factor, is essential for normal lung development
    • Wani MA, Wert SE, Lingrel JB. Lung Kruppel-like factor, a zinc finger transcription factor, is essential for normal lung development. J Biol Chem 1999;274:21180-5.
    • (1999) J Biol Chem , vol.274 , pp. 21180-21185
    • Wani, M.A.1    Wert, S.E.2    Lingrel, J.B.3
  • 36
    • 0035425243 scopus 로고    scopus 로고
    • CCAAT-enhancer-binding protein beta (C/EBP beta) activates CCR5 promoter: Increased C/EBP beta and CCR5 in T lymphocytes from HIV-1-infected individuals
    • Rosati M, Valentin A, Patenaude DJ, Pavlakis GN. CCAAT-enhancer-binding protein beta (C/EBP beta) activates CCR5 promoter: increased C/EBP beta and CCR5 in T lymphocytes from HIV-1-infected individuals. J Immunol 2001;167:1654-62.
    • (2001) J Immunol , vol.167 , pp. 1654-1662
    • Rosati, M.1    Valentin, A.2    Patenaude, D.J.3    Pavlakis, G.N.4
  • 37
    • 0037039312 scopus 로고    scopus 로고
    • CCAAT/enhancer binding protein-beta is a mediator of keratinocyte survival and skin tumorigenesis involving oncogenic Ras signaling
    • Zhu S, Yoon K, Sterneck E, Johnson PF, Smart RC. CCAAT/enhancer binding protein-beta is a mediator of keratinocyte survival and skin tumorigenesis involving oncogenic Ras signaling. Proc Natl Acad Sci USA 2002;99:207-12.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 207-212
    • Zhu, S.1    Yoon, K.2    Sterneck, E.3    Johnson, P.F.4    Smart, R.C.5
  • 38
    • 0036566240 scopus 로고    scopus 로고
    • Human immune associated nucleotide 1: A member of a new guanosine triphosphatase family expressed in resting T and B cells
    • Cambot M, Aresta S, Kahn-Perles B, de Gunzburg J, Romeo PH. Human immune associated nucleotide 1: a member of a new guanosine triphosphatase family expressed in resting T and B cells. Blood 2002;99:3293-301.
    • (2002) Blood , vol.99 , pp. 3293-3301
    • Cambot, M.1    Aresta, S.2    Kahn-Perles, B.3    De Gunzburg, J.4    Romeo, P.H.5
  • 40
    • 0036382945 scopus 로고    scopus 로고
    • The Hox Paradox: More complex(es) than imagined
    • Prince V. The Hox Paradox: More complex(es) than imagined. Dev Biol 2002:249:1-15.
    • (2002) Dev Biol , vol.249 , pp. 1-15
    • Prince, V.1
  • 41
    • 0025797513 scopus 로고
    • Regionally restricted developmental defects resulting from targeted disruption of the mouse homeobox gene hox-1.5
    • Chisaka O, Capecchi MR. Regionally restricted developmental defects resulting from targeted disruption of the mouse homeobox gene hox-1.5. Nature (Lond.) 1991;350:473-9.
    • (1991) Nature (Lond.) , vol.350 , pp. 473-479
    • Chisaka, O.1    Capecchi, M.R.2
  • 42
    • 0035581339 scopus 로고    scopus 로고
    • Hoxa3 regulates integration of glossopharyngeal nerve precursor cells
    • Watari N, Kameda Y, Takeichi M, Chisaka O. Hoxa3 regulates integration of glossopharyngeal nerve precursor cells. Dev Biol 2001:240:15-31.
    • (2001) Dev Biol , vol.240 , pp. 15-31
    • Watari, N.1    Kameda, Y.2    Takeichi, M.3    Chisaka, O.4
  • 43
    • 0032030895 scopus 로고    scopus 로고
    • Hox group 3 paralogs regulate the development and migration of the thymus, thyroid, and parathyroid glands
    • Manley NR, Capecchi MR. Hox group 3 paralogs regulate the development and migration of the thymus, thyroid, and parathyroid glands. Dev Biol 1998;195:1-15.
    • (1998) Dev Biol , vol.195 , pp. 1-15
    • Manley, N.R.1    Capecchi, M.R.2
  • 44
    • 0034119902 scopus 로고    scopus 로고
    • Hoxa3 and pax1 transcription factors regulate the ability of fetal thymic epithelial cells to promote thymocyte development
    • Su DM, Manley NR. Hoxa3 and pax1 transcription factors regulate the ability of fetal thymic epithelial cells to promote thymocyte development. J Immunol 2000;164:5753-60.
    • (2000) J Immunol , vol.164 , pp. 5753-5760
    • Su, D.M.1    Manley, N.R.2
  • 45
    • 0026514554 scopus 로고
    • Modulation of homeobox gene expression alters the phenotype of human hematopoietic cell lines
    • Shen WF, Detmer K, Mathews CH, et al. Modulation of homeobox gene expression alters the phenotype of human hematopoietic cell lines. EMBO J 1992;11:983-9.
    • (1992) EMBO J , vol.11 , pp. 983-989
    • Shen, W.F.1    Detmer, K.2    Mathews, C.H.3
  • 46
    • 0030729371 scopus 로고    scopus 로고
    • Effects of HOX homeobox genes in blood cell differentiation
    • Magli MC, Largman C, Lawrence HJ. Effects of HOX homeobox genes in blood cell differentiation. J Cell Physiol 1997;173:168-77.
    • (1997) J Cell Physiol , vol.173 , pp. 168-177
    • Magli, M.C.1    Largman, C.2    Lawrence, H.J.3
  • 47
    • 0028079924 scopus 로고
    • Differential expression of homeobox genes in functionally distinct CD34+ subpopulations of human bone marrow cells
    • Sauvageau G, Lansdorp PM, Eaves CJ, et al. Differential expression of homeobox genes in functionally distinct CD34+ subpopulations of human bone marrow cells. Proc Natl Acad Sci USA 1994;91:12223-7.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 12223-12227
    • Sauvageau, G.1    Lansdorp, P.M.2    Eaves, C.J.3
  • 48
    • 0036046106 scopus 로고    scopus 로고
    • Expression pattern of HOXB6 homeobox gene in myelomonocytic differentiation and acute myeloid leukemia
    • Giampaolo A, Felli N, Diverio D, et al. Expression pattern of HOXB6 homeobox gene in myelomonocytic differentiation and acute myeloid leukemia. Leukemia (Baltimore) 2002;16:1293-301.
    • (2002) Leukemia (Baltimore) , vol.16 , pp. 1293-1301
    • Giampaolo, A.1    Felli, N.2    Diverio, D.3
  • 49
    • 0033824190 scopus 로고    scopus 로고
    • Disruption of the homeobox gene Hoxb-6 in mice results in increased numbers of early erythrocyte progenitors
    • Kappen C. Disruption of the homeobox gene Hoxb-6 in mice results in increased numbers of early erythrocyte progenitors. Am J Hematol 2000;65:111-8.
    • (2000) Am J Hematol , vol.65 , pp. 111-118
    • Kappen, C.1
  • 50
    • 0036682376 scopus 로고    scopus 로고
    • Meta-analysis of microarrays: Interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer
    • Rhodes DR, Barrette TR, Rubin MA, Ghosh D, Chinnaiyan AM. Meta-analysis of microarrays: interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer. Cancer Res 2002;62:4427-33.
    • (2002) Cancer Res , vol.62 , pp. 4427-4433
    • Rhodes, D.R.1    Barrette, T.R.2    Rubin, M.A.3    Ghosh, D.4    Chinnaiyan, A.M.5
  • 52
    • 0028091194 scopus 로고
    • A cell initiating human acute myeloid leukaemia after transplantation into SCID mice
    • Lapidot T, Sirard C, Vormoor J, et al. A cell initiating human acute myeloid leukaemia after transplantation into SCID mice. Nature (Lond.) 1994;367:645-8.
    • (1994) Nature (Lond.) , vol.367 , pp. 645-648
    • Lapidot, T.1    Sirard, C.2    Vormoor, J.3
  • 53
    • 0029796299 scopus 로고    scopus 로고
    • Identification of human juvenile chronic myelogenous leukemia stem cells capable of initiating the disease in primary and secondary SCID mice
    • Lapidot T, Grunberger T, Vormoor J, et al. Identification of human juvenile chronic myelogenous leukemia stem cells capable of initiating the disease in primary and secondary SCID mice. Blood 1996;88:2655-64.
    • (1996) Blood , vol.88 , pp. 2655-2664
    • Lapidot, T.1    Grunberger, T.2    Vormoor, J.3
  • 55
    • 0344735881 scopus 로고    scopus 로고
    • Cancerous stem cells can arise from pediatric brain tumors
    • Hemmati HD, Nakano I, Lazareff IA, et al. Cancerous stem cells can arise from pediatric brain tumors. Proc Natl Acad Sci USA 2003;100:15178-83.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 15178-15183
    • Hemmati, H.D.1    Nakano, I.2    Lazareff, I.A.3
  • 57
    • 0035272681 scopus 로고    scopus 로고
    • Normal and leukemic CD34-negative human hematopoietic stem cells
    • Bonnet D. Normal and leukemic CD34-negative human hematopoietic stem cells. Rev Clin Exp. Hematol 2001;5:42-61.
    • (2001) Rev Clin Exp. Hematol , vol.5 , pp. 42-61
    • Bonnet, D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.