Phylogeny and biogeography of the "Australian" trichostomes (Ciliophora: Litostomata)

Protist

Volumn 155, Issue 2, 2004, Pages 215-235

  Cameron, Stephen L ^a,b   O'Donoghue, Peter J ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b BRIGHAM YOUNG UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CILIOPHORA; ENTODINIOMORPHIDA; HAPTORIA; LITOSTOMATEA; MAMMALIA; METATHERIA; TRICHOSTOMATIA; VESTIBULIFERIDA;

EID: 3042763017     PISSN: 14344610     EISSN: None     Source Type: Journal    
DOI: 10.1078/143446104774199600     Document Type: Article

References (90)

1. Allen RD (1967) Fine structure, reconstruction and possible functions of the cortex of Terahymena pyriformis. J Protozool 14: 553-565
2. Anderson E, Dumont JN (1966) A comparative study of the concrement vacuole of certain endocommensal ciliates - a so-called mechanoreceptor. J Ultrastruct Res 15: 414-450
3. Archer M (1984) The Australian Mammal Radiation. In Archer M, Clayton G (eds) Vertebrate Zoogeography and Evolution in Australasia. Hesperian Press, Perth, pp 633-808
4. Archer M, Arena T, Bassarova M, Black K, Brammall J, Cooke B, Creaser P, Crosby K, Gillespie A, Godthelp H, Gott M, Hand S.J, Kear B, Krikmann A, Mackness B, Muirhead J, Musser A, Myers T, Pledge N, Wang Y, Wroe S (1999) The evolutionary history and diversity of Australian mammals. Aust Mammal 21: 1-45
5. Bernhard D, Leipe DD, Sogin ML, Schlegel KM (1995) Phylogenetic relationships of the Nassulida within the phylum Ciliophora inferred from the complete subunit rRNA gene sequences of Furgasonia blochmanni, Obertrumia georgiana and Pseudomicrothorax dubius. J Eukaryot Microbiol 42: 126-131
6. Bohatier J (1970) Structure et ultrastructure de Lacrymaria olar. Protistologica 6: 331-342
7. Bohatier J (1975) Structure et charactérisation cytoplasmique des composants macronuléaires chez le cilié Lacrymaria olar. Protistologica 11: 251-262
8. Bohatier J, Detcheva R (1973) Observations sur la cytologie et sur l'ultrastructure du cilié Acropisthium mutabile Perty 1852. Comp Rend Sceances Soc Biol Filial Assoc (Paris) 167: 972-976
9. Bohatier J, Njine T (1973) Observations ultrastructurales sur le cilié holotrich gymnostome Litonotus quadrinucleatus Dragesco et Njine 1971. Protistologica 9: 359-372
10. Bonhomme A, Grain J, Collet JY (1989) Etude ultrastructurale de Troglodytella gorillae, cilié de l'intestin des gorilles. Europ J Protistol 24: 225-237
11. Cameron SL, O'Donoghue PJ (2002a) The ultrastructure of Amylovorax dehorityi comb. nov. and erection of the Amylovoracidae fam. nov. (Ciliophora: Trichostomatia). Europ J Protistol 38: 29-44
12. Cameron SL, O'Donoghue PJ (2002b) The ultrastructure of Macropodinium moiri and revised diagnosis of the Macropodiniidae (Litostomatea: Trichostomatia). Europ J Protistol 38: 179-194
13. Cameron SL, O'Donoghue PJ (2002c) Trichostome ciliates from Australian marsupials. I. Bandia gen. nov. (Litostomatea: Amylovoracidae). Europ J Protistol 38: 405-429
14. Cameron SL, O'Donoghue PJ (2003a) Trichostome ciliates from Australian marsupials. II. Polycosta gen. nov. (Litostomatea: Polycostidae fam. nov.). Europ J Protistol 39: 83-100
15. Cameron SL, O'Donoghue PJ (2003b) Trichostome ciliates from Australian marsupials. III. Megavestibulum gen. nov. (Litostomatea: Macropodiniidae). Europ J Protistol 39: 123-138
16. Cameron SL, O'Donoghue PJ (2003c) Trichostome ciliates from Australian marsupials. IV. Distribution of the ciliate fauna. Europ J Protistol 39: 139-148
17. Cameron SL, Adlard RD, O'Donoghue PJ (2001) Evidence for an independent radiation of endosymbiotic litostome ciliates in Australian marsupial herbivores. Mol Phylogen Evol 20: 302-310
18. Cameron SL, Wright ADG, O'Donoghue PJ (2003) An expanded phylogeny of the Entodiniomorphida (Ciliophora: Litostomatea). Acta Protozool 42: 1-6
19. Cantino PD, Bryant H, de Queiroz K, Donoghue MJ, Eriksson T, Hillis DM, Lee MSY (1999) Species names in phylogenetic nomenclature. Syst Biol 48: 790-807
20. Chilton NB, Gasser RB, Beveridge I (1997) Phylogenetic relationships of Australian strongyloid nematodes inferred from ribosomal DNA sequence data. Int J Parasitol 27: 1481-1494
21. nd ed. Pergamon Press, Oxford
22. Dehority BA (1996) A new family of entodiniomorph protozoa from the marsupial forestomach, with descriptions of a new genus and five new species. J Eukaryot Microbiol 43: 285-295
23. de Puytorac P, Rodrigues de Santa Rosa M (1975) Observations cytologiques sur le cilié gymnostome Loxophyllum meleagris Duj., 1841. Protistologica 11: 379-390
24. Embley MT, Finlay B, Thomas RH, Dyal P (1992) The use of rRNA sequences and flourescent probes to investigate the phylogenetic positions of the anaerobic ciliate Metopus palaeoformis and its archarobacterial endosymbiont. J Gen Microbiol 138: 1479-1487
25. Embley TM, Finlay BJ, Dyal PL, Hirt RP, Wilkinson M, Williams AG (1995) Multiple origins of anaerobic ciliates with hydrogenosomes within the radiation of aerobic ciliates. Proc R Soc London B 262: 87-93
26. Flannery T (1989) Phylogeny of the Macropodoidea: a Study in Convergence. In Grigg G, Jarman P, Hume I (eds) Kangaroos, Wallabies and Rat-Kangaroos Vol 1. Surrey Beatty and Sons, Chipping Norton, pp 1-46
27. Florey PL, Kitching IJ (2000) Experiments in Coding Multistate Characters. In Scotland R, Pennington RT (eds) Homology and Systematics: Coding characters for phylogenetic analysis. Taylor & Francis, London, pp 54-80
28. Foissner W (1984) Infraciliatur, Silberlinienesystem und Biometrie einiger neuer und wenig bekannter terrestrischer, limnischer und mariner Ciliaten (Protozoa: Ciliophora) aus den Klassen Kinetofragminophora, Colpodea und Polyhymenophora. Stapfia 12: 1-165
29. Foissner W, Foissner I (1985) Oral monokinetids in the free living haptorid Enchelydium polynucleatum (Ciliophora: Enchelyidae): ultrastructural evidence and phylogenetic implications. J Protozool 32: 712-722
30. Foissner W, Foissner I (1988) The fine structure of Fuscheria terricola Berger et al., 1983 and a proposed new classification of the subclass Haptoria Corliss, 1974 (Ciliophora: Litostomatea). Arch Protistenkd 135: 213-235
31. Fryd-Versavel G, Iftode F, Dragesco J (1975) Contribution à la connaissance de quelques ciliés gymnostomes. II Prostomiens, pleurostomiens; morpholgie, stomatogenèse. Protistologica 11: 509-530
32. Furness DN, Butler RD (1983) The cytology of sheep rumen ciliates I. Ultrastructure of Epidinium caudatum Crawley. J Protozool 30: 676-687
33. Furness DN, Butler RD (1985a) The cytology of sheep rumen ciliates II. Ultrastructure of the Eudiplodinium maggii. J Protozool 32: 205-214
34. Furness DN, Butler RD (1985b) The cytology of sheep rumen ciliates III. Ultrastructure of the Genus Entodinium (Stein). J Protozool 32: 699-707
35. Furness DN, Butler RD (1988) The functional and evolutionary significance of the ultrastructure of the Ophryoscolecidae (Order Entodiniomorphida). J Protozool 35: 34-38
36. Golinska K (1982) Regulation of the ciliary patterns in Dileptus (Ciliata) I. Sensory cilia and their conversion into locomotor cilia. J Embryol Exp Morphol 68: 99-114
37. Golinska K, Kink J (1976) Proportional regulation of body form and cortical organelle pattern in the ciliate Dileptus. J Cell Sci 24: 11-29
38. Grain J (1966) Etude cytologique de quelques ciliés holotriches endocommensaux des ruminants et des équidés. Protistologica 2(1): 59-141; 2(2): 5-51
39. Grain J (1966) Etude cytologique de quelques ciliés holotriches endocommensaux des ruminants et des équidés. Protistologica 2(1): 59-141; 2(2): 5-51
40. Grain J (1970) Structure et ultrastructure de Lagynophrya fusidens Kahl, 1927. Protistologica 6: 37-51
41. Graybeal A (1998) Is it better to add taxa or characters to a difficult phylogenetic problem? Syst Biol 47: 9-17
42. Hammerschmidt B, Schlegel M, Lynn D, Leipe D, Sogin M, Raikov I (1996) Insights into the evolution of nuclear dualism in the ciliates revealed by phylogenetic analysis of rRNA sequences. J Eukaryot Microbiol 43: 225-230
43. Hauser DL, Presch W (1991) The effect of ordered characters on phylogenetic reconstruction. Cladistics 7: 243-265
44. Hennig W (1966) Phylogenetic Systematics. University of Illinois Press, Urbana
45. Holt PA, Lynn DH, Corliss JO (1973) An ultrastructural study of the tentacle-bearing ciliate Actinobolina smalli n. sp. and its systematic and phylogenetic implications. Protistologica 10: 413-451
46. Ito A, Imai S (2000a): Ciliates from the cecum of capybara (Hydrochoerus hydrochaeris) in Bolivia 1. The families Hydrochoerellidae n. fam., Protohallidae, and Pycnotrichidae. Europ J Protistol 36: 53-84
47. Ito A, Imai S (2000b): Ciliates from the cecum of capybara (Hydrochoerus hydrochaeris) in Bolivia 2. The family Cycloposthiidae. Europ J Protistol 36: 169-200
48. Ito A, Miyazaki Y, Imai S (2002): Descriptions of new Parentodinium dilates in the family Parentodiniidae n. fam. from Hippopotamus amphibius in comparison with some entodiniomorphs from horses and cattle. Europ J Protist 37: 405-426
49. Kirsch J, Lapointe F, Springer M (1997) DNA hybridisation studies of marsupials and their implications for metatherian classification. Aust J Zool 45: 211-280
50. nd ed. The Systematics Association Publication No. 11. Oxford University Press, Oxford
51. Lee DC, Bryant HN (1999) A reconsideration of the coding of inapplicable characters: assumptions and problems. Cladistics 15: 373-378
52. Leipe DD, Hausmann K (1989) Somatic infraciliature of the haptorid ciliate Homalozoon vermiculare (Kinetofragminophora: Gymnostomata) Ditransversalia n. subcl. and phylogenetic implications. J Protozool 36: 280-289
53. Leipe DD, Bernhard D, Schlegel M, Sogin ML (1994) Evolution of 16S-like ribosomal RNA genes in the ciliophoran taxa Litostomatea and Phyllopharyngea. Europ J Protistol 30: 354-361
54. Lipscomb D, Riordan G (1990) The ultrastructure of Chaenea teres and an analysis of the phylogeny of hpatorid ciliates. J Protozool 37: 287-300
55. Lipscomb D, Riordan G (1992) A reexamination of the ultrastructure of Didinium nasutum and a reanalysis of the phylogeny of the haptorid ciliates. J Protozool 39: 110-121
56. Lynn DH (1985) Cortical ultrastructure of Coleps bicuspis Noland, 1925 and the phylogeny of the class Prostomatea (Ciliophora). BioSystems 18: 387-397
57. Lynn DH, Nicholls KH (1985) Cortical microtubular structures of the ciliate Lepidotrachelophyllum fornicus Nicholls & Lynn, 1984 and phylogeny of the litostome ciliates. Can J Zool 63: 1835-1845
58. Lynn DH, Small E (1997) A revised classification of the Phylum Ciliophora Dolfein, 1901. Rev Soc Mex Hist Nat 47: 65-78
59. Maddison W (1993) Missing data versus missing characters in phylogenetic analysis. Sys Biol 42: 576-581
60. Maddison WP, Maddison DR (2000) MacClade version 4. Sinauer Associates, Sunderland, MA
61. Marenssi SA, Reguero MA, Santillana SN, Vizcaino SF (1994) Eocene land mammals from Seymour Island, Antarctica: palaeobiogeographical implications. Antarctic Sci 6: 3-15
62. Nixon KC, Carpenter JM (1996) On simultaneous analysis. Cladistics 12: 221-241
63. O'Donoghue PJ, Adlard RD (2000) Catalogue of protozoan parasites recorded in Australia. Mem Qld Mus 45: 1-163
64. Paul RG, Bulter RD, Williams AG (1989) Ultrastructure of the rumen ciliate Dasytricha rumantium. Europ J Protistol 24: 205-215
65. Paulin JJ, Krascheninnikow S (1973) An electron microscopic study of Balantidium caviae. Acta Protozool 12: 97-108
66. Platnick NI, Griswold CE, Coddington JA (1991) On missing entries in cladistic analysis. Cladistics 3: 201-209
67. Pleijel F (1999) Phylogenetic taxonomy, a farewell to species, and a revision of Heteropodarke (Hesionidae, Polychaeta, Annelida). Syst Biol 48: 755-789
68. Raikov IB, Kovaleva VG (1980) Fine structure of the circumoral ciliature and pharyngeal apparatus of the marine ciliate Helicoprorodon gigas (Gymnostomata). Protistologica 16: 177-198
69. Rambaut A (1996) Se-Al (Sequence Alignment Editor). Ver. 1.0a1. Private release software, Oxford
70. Rodrigues de Santa Rosa M (1974) Particularities ultrastructurales (mycocysts, système microfibrillaire) du cilié Loxophyllum meleagris Dujardin, 1841. Comp Rend Sceances Soc Biol Filial Assoc (Paris) 168: 1349-1352
71. Rodrigues de Santa Rosa M, Didier P (1975) Remarques sur l'ultrastructure du cilié gymnostome Monodinium balbiani (Fabre-Domerque, 1888). Protistologica 11: 469-480
72. Saxena R, Saxena D, Jurand A (1978a) Ultrastructural studies on the gymnostome ciliate Homalozoon vermiculare (Stokes) I: The cortex and ectoplasmic organelles. Arch Protistenkd 120: 341-353
73. Saxena R, Saxena D, Jurand A (1978b) Ultrastructural studies on the gymnostome ciliate Homalozoon vermiculare (Stokes) II: The endoplasm and endoplasmic organelles. Arch Protistenkd 120: 378-392
74. Senaud J, Grain J (1972) Etude ultrastructurale préliminaire de Cochliatoxum periachtum Gassovsky, 1919, cilié entodiniomorphe endocommensal du cheval. Protistologica 8: 65-82
75. Slowinski JB (1993) "Unordered" versus "ordered" characters. Syst Biol 42: 155-165
76. Sorenson MD (1999) TreeRot, version 2. Boston University, Boston, MA
77. Swofford DL (2002) PAUP* Phylogenetic Analysis using Parsimony (*and Other Methods). Ver. 4. Sinauer Associates, Sunderland, MA
78. Tatchell EC (1980) An ulrastructural study of the extension and contraction in Lacrymaria olar (O.F. Müller). Protistologica 16: 167-175
79. van Hoek A, van Alen TA, Sprakel VSI, Hackstein JHP, Vogels GD (1998) Evolution of anaerobic ciliates from the gastrointestinal tract: Phylogenetic analysis of the ribosomal repeat from Nyctotherus ovalis and its relatives. Mol Biol Evol 15: 1195-1206
80. van Hoven W, Gilchrist F, Hamilton-Attwell V (1987) Intestinal ciliated protozoa of African rhinoceros: Two new genera and five new species from the white rhino (Ceratotherium simum Burchell, 1817). J Protozool 34: 338-342
81. Williams DB, Williams BD, Hogan BK (1981) Ultrastructure of the somatic cortex of the gymnostome ciliate Spathidium spatula (O.F.M.) J Protozool 28: 90-99
82. Williams NE, Frankel J (1973) Regulation of microtubules in Tetrahymena. I. Electron microscopy of oral replacement. J Cell Biol 56: 441-457
83. Wolska M (1978a) Tripalmaria dogieli Gass., 1928 (Ciliata, Entodiniomorphida). Structure and ultrastructure Part II. Electron-microscope examinations. Acta Protozool 17: 21-30
84. Wolska M (1978b) Triadinium caudatum Fiorent. Electron microscope examinations. Acta Protozool 17: 445-454
85. Wolska M (1978c) Light and electron microscope studies on Ochoterenaia appendiculata Chavarria (Ciliata, Blepharocorythina). Acta Protozool 17: 483-492
86. Wolska M (1979) Circodinium minimum (Gassovsky, 1918), Electron-microscope investigations. Acta Protozool 18: 223-229
87. Wright ADG (1998) Molecular phylogeny of the endosymbiotic ciliates (Litostomatea: Trichostomatia) of vertebrate animals inferred from 18S rRNA gene sequences. PhD thesis. The University of Guelph
88. Wright ADG, Lynn DH (1997a) Monophyly of the trichostome ciliates (phylum Ciliophora: class Litostomatea) tested using new 18S rRNA sequences from the vestibuliferids, Isotricha intestinalis and Dasytricha ruminantium, and the haptorian, Didinium nasutum. Europ J Protistol 33: 305-315
89. Wright ADG, Lynn DH (1997b) Phylogenetic analysis of the rumen ciliate family Ophryoscolecidae based on 18S ribosomal RNA sequences with new sequences from Diplodinium, Eudiplodinium and Ophryoscolex. Can J Zool 75: 963-970
90. Wright ADG, Dehority B, Lynn DH (1997) Phylogeny of the rumen ciliates Entodinium, Epidinium and Polyplastron (Liotstomatea: Entodiniomorphida) inferred from small subunit ribosomal RNA sequences. J Eukaryot Microbiol 44: 61-67