메뉴 건너뛰기




Volumn 68, Issue 1, 2004, Pages 132-137

Bacillus subtilis ypgA gene is fni, a nonessential gene encoding type 2 isopentenyl diphosphate isomerase

Author keywords

2 C methyl D erythritol 4 phosphate (MEP) pathway; Bacillus subtilis; Biosynthesis; Isomerase; Isoprenoid

Indexed keywords

FLAVINE MONONUCLEOTIDE; ISOMERASE; ISOPENTENYL DIPHOSPHATE DELTA ISOMERASE; ISOPENTENYLDIPHOSPHATE DELTA-ISOMERASE; NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE; RECOMBINANT PROTEIN;

EID: 3042762640     PISSN: 09168451     EISSN: None     Source Type: Journal    
DOI: 10.1271/bbb.68.132     Document Type: Article
Times cited : (28)

References (22)
  • 1
    • 0003182856 scopus 로고    scopus 로고
    • Isoprenoid biosynthesis overview
    • eds. Barton, D. H. R., and Nakanishi, K., Elsevier, Oxford
    • Cane, D. E., Isoprenoid biosynthesis overview. In "Comprehensive Natural Products Chemistry", eds. Barton, D. H. R., and Nakanishi, K., Elsevier, Oxford, pp. 1-484 (1999).
    • (1999) Comprehensive Natural Products Chemistry , pp. 1-484
    • Cane, D.E.1
  • 2
    • 0031434083 scopus 로고    scopus 로고
    • Isopentenyl diphosphate isomerase: A core enzyme in isoprenoid biosynthesis. A review of its biochemistry and function
    • Ramos-Valdivia, A. C., van der Heijden, R., and Verpoorte, R., Isopentenyl diphosphate isomerase: a core enzyme in isoprenoid biosynthesis. A review of its biochemistry and function. Nat. Prod. Rep., 14, 591-603 (1997).
    • (1997) Nat. Prod. Rep. , vol.14 , pp. 591-603
    • Ramos-Valdivia, A.C.1    Van Der Heijden, R.2    Verpoorte, R.3
  • 3
    • 0030221366 scopus 로고    scopus 로고
    • Human isopentenyl diphosphate:dimethylallyl diphosphate isomerase: Overproduction, purification, and characterization
    • Hahn, F. M., Xuan, J. W., Chambers, A. F., and Poulter, C. D., Human isopentenyl diphosphate:dimethylallyl diphosphate isomerase: overproduction, purification, and characterization. Arch. Biochem. Biophys., 332, 30-34 (1996).
    • (1996) Arch. Biochem. Biophys. , vol.332 , pp. 30-34
    • Hahn, F.M.1    Xuan, J.W.2    Chambers, A.F.3    Poulter, C.D.4
  • 4
    • 0024789309 scopus 로고
    • Isopentenyl diphosphate:dimethylallyl diphosphate isomerase. An improved purification of the enzyme and isolation of the gene from Saccharomyces cerevisiae
    • Anderson, M. S., Muehlbacher, M., Street, I. P., Proffitt, J., and Poulter, C. D., Isopentenyl diphosphate:dimethylallyl diphosphate isomerase. An improved purification of the enzyme and isolation of the gene from Saccharomyces cerevisiae. J. Biol. Chem., 264, 19169-19175 (1989).
    • (1989) J. Biol. Chem. , vol.264 , pp. 19169-19175
    • Anderson, M.S.1    Muehlbacher, M.2    Street, I.P.3    Proffitt, J.4    Poulter, C.D.5
  • 5
    • 0032811818 scopus 로고    scopus 로고
    • Escherichia coli open reading frame 696 is idi, a nonessential gene encoding isopentenyl diphosphate isomerase
    • Hahn, F. M., Hurlburt, A. P., and Poulter, C. D., Escherichia coli open reading frame 696 is idi, a nonessential gene encoding isopentenyl diphosphate isomerase. J. Bacteriol., 181, 4499-4504 (1999).
    • (1999) J. Bacteriol. , vol.181 , pp. 4499-4504
    • Hahn, F.M.1    Hurlburt, A.P.2    Poulter, C.D.3
  • 6
    • 0030048551 scopus 로고    scopus 로고
    • Open reading frame 176 in the photosynthesis gene cluster of Rhodobacter capsulatus encodes idi, a gene for isopentenyl diphosphate isomerase
    • Hahn, F. M., Baker, J. A., and Poulter, C. D., Open reading frame 176 in the photosynthesis gene cluster of Rhodobacter capsulatus encodes idi, a gene for isopentenyl diphosphate isomerase. J. Bacteriol., 178, 619-624 (1996).
    • (1996) J. Bacteriol. , vol.178 , pp. 619-624
    • Hahn, F.M.1    Baker, J.A.2    Poulter, C.D.3
  • 7
    • 0035970116 scopus 로고    scopus 로고
    • An unusual isopentenyl diphosphate isomerase found in the mevalonate pathway gene cluster from Streptomyces sp. strain CL190
    • Kaneda, K., Kuzuyama, T., Takagi, M., Hayakawa, Y., and Seto, H., An unusual isopentenyl diphosphate isomerase found in the mevalonate pathway gene cluster from Streptomyces sp. strain CL190. Proc. Natl. Acad. Sci. USA, 98, 932-937 (2001).
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 932-937
    • Kaneda, K.1    Kuzuyama, T.2    Takagi, M.3    Hayakawa, Y.4    Seto, H.5
  • 8
    • 0033213706 scopus 로고    scopus 로고
    • The discovery of a mevalonate-independent pathway for isoprenoid biosynthesis in bacteria, algae and higher plants
    • Rohmer, M., The discovery of a mevalonate-independent pathway for isoprenoid biosynthesis in bacteria, algae and higher plants. Nat. Prod. Rep., 16, 565-574 (1999).
    • (1999) Nat. Prod. Rep. , vol.16 , pp. 565-574
    • Rohmer, M.1
  • 9
    • 0035478823 scopus 로고    scopus 로고
    • The nonmevalonate pathway of isoprenoids: Genes, enzymes and intermediates
    • Rohdich, F., Kis, K., Bacher, A., and Eisenreich, W., The nonmevalonate pathway of isoprenoids: genes, enzymes and intermediates. Curr. Opin. Chem. Biol., 5, 535-540 (2001).
    • (2001) Curr. Opin. Chem. Biol. , vol.5 , pp. 535-540
    • Rohdich, F.1    Kis, K.2    Bacher, A.3    Eisenreich, W.4
  • 10
    • 0035208850 scopus 로고    scopus 로고
    • Deoxyxylulose phosphate pathway to terpenoids
    • Eisenreich, W., Rohdich, F., and Bacher, A., Deoxyxylulose phosphate pathway to terpenoids. Trends Plant Sci., 6, 78-84 (2001).
    • (2001) Trends Plant Sci. , vol.6 , pp. 78-84
    • Eisenreich, W.1    Rohdich, F.2    Bacher, A.3
  • 11
    • 0036690439 scopus 로고    scopus 로고
    • Mevalonate and nonmevalonate pathways for the biosynthesis of isoprene units
    • Kuzuyama, T., Mevalonate and nonmevalonate pathways for the biosynthesis of isoprene units. Biosci. Biotechnol. Biochem., 66, 1619-1627 (2002).
    • (2002) Biosci. Biotechnol. Biochem. , vol.66 , pp. 1619-1627
    • Kuzuyama, T.1
  • 12
    • 0037394552 scopus 로고    scopus 로고
    • Diversity of the biosynthesis of the isoprene units
    • Kuzuyama, T., and Seto, H., Diversity of the biosynthesis of the isoprene units. Nat. Prod. Rep., 20, 171-183 (2003).
    • (2003) Nat. Prod. Rep. , vol.20 , pp. 171-183
    • Kuzuyama, T.1    Seto, H.2
  • 14
    • 0027368566 scopus 로고
    • The organization of the Bacillus subtilis 168 chromosome region between the spoVA and serA genetic loci, based on sequence data
    • Sorokin, A., Zumstein, E., Azevedo, V., Ehrlich, S. D., and Serror, P., The organization of the Bacillus subtilis 168 chromosome region between the spoVA and serA genetic loci, based on sequence data. Mol. Microbiol., 10, 385-395 (1993).
    • (1993) Mol. Microbiol. , vol.10 , pp. 385-395
    • Sorokin, A.1    Zumstein, E.2    Azevedo, V.3    Ehrlich, S.D.4    Serror, P.5
  • 16
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson, W. R., and Lipman, D. J., Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA, 85, 2444-2448 (1988).
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 17
    • 0032558613 scopus 로고    scopus 로고
    • Fosmidomycin, a specific inhibitor of 1-deoxy-D-xylulose 5-phosphate reductoisomerase in the nonmevalonate pathway for terpenoid biosynthesis
    • Kuzuyama, T., Shimizu, T., Takahashi, S., and Seto, H., Fosmidomycin, a specific inhibitor of 1-deoxy-D-xylulose 5-phosphate reductoisomerase in the nonmevalonate pathway for terpenoid biosynthesis. Tetrahedron Lett., 39, 7913-7916 (1998).
    • (1998) Tetrahedron Lett. , vol.39 , pp. 7913-7916
    • Kuzuyama, T.1    Shimizu, T.2    Takahashi, S.3    Seto, H.4
  • 18
    • 0034685680 scopus 로고    scopus 로고
    • Isopentenyl diphosphate isomerase deficiency in Synechocystis sp. strain PCC6803
    • Ershov, Y., Gantt, R. R., Cunningham, F. X., and Gantt, E., Isopentenyl diphosphate isomerase deficiency in Synechocystis sp. strain PCC6803. FEBS Lett., 473, 337-340 (2000).
    • (2000) FEBS Lett. , vol.473 , pp. 337-340
    • Ershov, Y.1    Gantt, R.R.2    Cunningham, F.X.3    Gantt, E.4
  • 19
    • 0036724815 scopus 로고    scopus 로고
    • Isoprenoid biosynthesis in Synechocystis sp. strain PCC6803 is stimulated by compounds of the pentose phosphate cycle but not by pyruvate or deoxyxylulose-5-phosphate
    • Ershov, Y. V., Gantt, R. R., Cunningham, F. X., and Gantt, E., Isoprenoid biosynthesis in Synechocystis sp. strain PCC6803 is stimulated by compounds of the pentose phosphate cycle but not by pyruvate or deoxyxylulose-5-phosphate. J. Bacteriol., 184, 5045-5051 (2002).
    • (2002) J. Bacteriol. , vol.184 , pp. 5045-5051
    • Ershov, Y.V.1    Gantt, R.R.2    Cunningham, F.X.3    Gantt, E.4
  • 20
    • 0034724503 scopus 로고    scopus 로고
    • Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones
    • Sato, S., Nakamura, Y., Kaneko, T., Katoh, T., Asamizu, E., and Tabata, S., Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones. DNA Res., 7, 131-135 (2000).
    • (2000) DNA Res. , vol.7 , pp. 131-135
    • Sato, S.1    Nakamura, Y.2    Kaneko, T.3    Katoh, T.4    Asamizu, E.5    Tabata, S.6
  • 21
    • 0024977935 scopus 로고
    • The active site of spinach glycolate oxidase
    • Lindqvist, Y., and Branden, C. I., The active site of spinach glycolate oxidase. J. Biol. Chem., 264, 3624-3628 (1989).
    • (1989) J. Biol. Chem. , vol.264 , pp. 3624-3628
    • Lindqvist, Y.1    Branden, C.I.2
  • 22
    • 0037868855 scopus 로고    scopus 로고
    • Crystal structure of the type II isopentenyl diphosphate:dimethylallyl diphosphate isomerase from Bacillus subtilis
    • Steinbacher, S., Kaiser, J., Gerhardt, S., Eisenreich, W., Huber, R., Bacher, A., and Rohdich, F., Crystal structure of the type II isopentenyl diphosphate:dimethylallyl diphosphate isomerase from Bacillus subtilis. J. Mol. Biol., 329, 973-982 (2003).
    • (2003) J. Mol. Biol. , vol.329 , pp. 973-982
    • Steinbacher, S.1    Kaiser, J.2    Gerhardt, S.3    Eisenreich, W.4    Huber, R.5    Bacher, A.6    Rohdich, F.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.