-
1
-
-
0030690394
-
Protein stability: Still an unsolved problem
-
Richards F.M. Protein stability: still an unsolved problem. Cell. Mol. Life Sci. 53:1997;790-802
-
(1997)
Cell. Mol. Life Sci.
, vol.53
, pp. 790-802
-
-
Richards, F.M.1
-
2
-
-
0030996005
-
Protein folding: The endgame
-
Levitt M., Gerstein M., Huang E., Subbiah S., Tsai J. Protein folding: the endgame. Ann. Rev. Biochem. 66:1997;549-579
-
(1997)
Ann. Rev. Biochem.
, vol.66
, pp. 549-579
-
-
Levitt, M.1
Gerstein, M.2
Huang, E.3
Subbiah, S.4
Tsai, J.5
-
3
-
-
0034106349
-
Theoretical studies of the response of a protein structure to cavity-creating mutations
-
Lee J., Lee K., Shin S. Theoretical studies of the response of a protein structure to cavity-creating mutations. Biophys. J. 78:2000;1665-1671
-
(2000)
Biophys. J.
, vol.78
, pp. 1665-1671
-
-
Lee, J.1
Lee, K.2
Shin, S.3
-
4
-
-
0036172116
-
Hydrophobic core packing in the SH3 domain folding transition state
-
Northey J.G., Di Nardo A.A., Davidson A.R. Hydrophobic core packing in the SH3 domain folding transition state. Nat. Struct. Biol. 9:2002;126-130
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 126-130
-
-
Northey, J.G.1
Di Nardo, A.A.2
Davidson, A.R.3
-
5
-
-
0034685612
-
Stabilization of GroEL minichaperones by core and surface mutations
-
Wang Q., Buckle A.M., Fersht A.R. Stabilization of GroEL minichaperones by core and surface mutations. J. Mol. Biol. 298:2000;917-926
-
(2000)
J. Mol. Biol.
, vol.298
, pp. 917-926
-
-
Wang, Q.1
Buckle, A.M.2
Fersht, A.R.3
-
6
-
-
0005492283
-
Structural comparison of psychrophilic and mesophilic trypsins. Elucidating the molecular basis of cold-adaptation
-
Schroder Leiros H.K., Willassen N.P., Smalas A.O. Structural comparison of psychrophilic and mesophilic trypsins. Elucidating the molecular basis of cold-adaptation. Eur. J. Biochem. 267:2000;1039-1049
-
(2000)
Eur. J. Biochem.
, vol.267
, pp. 1039-1049
-
-
Schroder Leiros, H.K.1
Willassen, N.P.2
Smalas, A.O.3
-
7
-
-
0017429069
-
Areas, volumes, packing and protein structure
-
Richards F.M. Areas, volumes, packing and protein structure. Annu. Rev. Biophys. Bioeng. 6:1977;151-176
-
(1977)
Annu. Rev. Biophys. Bioeng.
, vol.6
, pp. 151-176
-
-
Richards, F.M.1
-
8
-
-
0033694923
-
De novo design of helical bundles as models for understanding protein folding and function
-
Hill R.B., Raleigh D.P., Lombardi A., DeGrado W.F. De novo design of helical bundles as models for understanding protein folding and function. Acc. Chem. Res. 33:2000;745-754
-
(2000)
Acc. Chem. Res.
, vol.33
, pp. 745-754
-
-
Hill, R.B.1
Raleigh, D.P.2
Lombardi, A.3
Degrado, W.F.4
-
9
-
-
0029899119
-
Controlling topology and native-like behavior of de novo-designed peptides: Design and characterization of antiparallel four-stranded coiled coils
-
Betz S.F., DeGrado W.F. Controlling topology and native-like behavior of de novo-designed peptides: design and characterization of antiparallel four-stranded coiled coils. Biochemistry. 35:1996;6955-6962
-
(1996)
Biochemistry
, vol.35
, pp. 6955-6962
-
-
Betz, S.F.1
Degrado, W.F.2
-
10
-
-
0032254437
-
Hydrophobic core packing and protein design
-
Lazar G.A., Handel T.M. Hydrophobic core packing and protein design. Curr. Opin. Chem. Biol. 2:1998;675-679
-
(1998)
Curr. Opin. Chem. Biol.
, vol.2
, pp. 675-679
-
-
Lazar, G.A.1
Handel, T.M.2
-
12
-
-
0027177971
-
Metal ion-dependent modulation of the dynamics of a designed protein
-
Handel T.M., Williams S.A., DeGrado W.F. Metal ion-dependent modulation of the dynamics of a designed protein. Science. 261:1993;879-885
-
(1993)
Science
, vol.261
, pp. 879-885
-
-
Handel, T.M.1
Williams, S.A.2
Degrado, W.F.3
-
13
-
-
0035451185
-
Structured disorder and conformational selection
-
Tsai C.J., Ma B., Sham Y.Y., Kumar S., Nussinov R. Structured disorder and conformational selection. Proteins. 44:2001;418-427
-
(2001)
Proteins
, vol.44
, pp. 418-427
-
-
Tsai, C.J.1
Ma, B.2
Sham, Y.Y.3
Kumar, S.4
Nussinov, R.5
-
14
-
-
0030987610
-
Probing the role of packing specificity in protein design
-
Dahiyat B.I., Mayo S.L. Probing the role of packing specificity in protein design. Proc. Natl. Acad. Sci. U. S. A. 94:1997;10172-10177
-
(1997)
Proc. Natl. Acad. Sci. U. S. A.
, vol.94
, pp. 10172-10177
-
-
Dahiyat, B.I.1
Mayo, S.L.2
-
15
-
-
0030057864
-
What makes a protein a protein? Hydrophobic core designs that specify stability and structural properties
-
Munson M., Balasubramanian S., Fleming K.G., Nagi A.D., O'Brien R., Sturtevant J.M., Regan L. What makes a protein a protein? Hydrophobic core designs that specify stability and structural properties. Protein Sci. 5:1996;1584-1593
-
(1996)
Protein Sci.
, vol.5
, pp. 1584-1593
-
-
Munson, M.1
Balasubramanian, S.2
Fleming, K.G.3
Nagi, A.D.4
O'Brien, R.5
Sturtevant, J.M.6
Regan, L.7
-
16
-
-
0029958604
-
A test of the "jigsaw puzzle" model for protein folding by multiple methionine substitutions within the core of T4 lysozyme
-
Gassner N.C., Baase W.A., Matthews B.W. A test of the "jigsaw puzzle" model for protein folding by multiple methionine substitutions within the core of T4 lysozyme. Proc. Natl. Acad. Sci. U. S. A. 93:1996;12155-12158
-
(1996)
Proc. Natl. Acad. Sci. U. S. A.
, vol.93
, pp. 12155-12158
-
-
Gassner, N.C.1
Baase, W.A.2
Matthews, B.W.3
-
17
-
-
0028858499
-
De novo design of the hydrophobic cores of proteins
-
Desjarlais J.R., Handel T.M. De novo design of the hydrophobic cores of proteins. Protein Sci. 4:1995;2006-2018
-
(1995)
Protein Sci.
, vol.4
, pp. 2006-2018
-
-
Desjarlais, J.R.1
Handel, T.M.2
-
18
-
-
0035187229
-
Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a beta-trefoil
-
Brych S.R., Blaber S.I., Logan T.M., Blaber M. Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a beta-trefoil. Protein Sci. 10:2001;2587-2599
-
(2001)
Protein Sci.
, vol.10
, pp. 2587-2599
-
-
Brych, S.R.1
Blaber, S.I.2
Logan, T.M.3
Blaber, M.4
-
19
-
-
0035909809
-
Packing is a key selection factor in the evolution of protein hydrophobic cores
-
Chen J., Stites W.E. Packing is a key selection factor in the evolution of protein hydrophobic cores. Biochemistry. 40:2001;15280-15289
-
(2001)
Biochemistry
, vol.40
, pp. 15280-15289
-
-
Chen, J.1
Stites, W.E.2
-
20
-
-
0035923436
-
Energetics of side chain packing in staphylococcal nuclease assessed by exchange of valines, isoleucines, and leucines
-
Holder J.B., Bennett A.F., Chen J., Spencer D.S., Byrne M.P., Stites W.E. Energetics of side chain packing in staphylococcal nuclease assessed by exchange of valines, isoleucines, and leucines. Biochemistry. 40:2001;13998-14003
-
(2001)
Biochemistry
, vol.40
, pp. 13998-14003
-
-
Holder, J.B.1
Bennett, A.F.2
Chen, J.3
Spencer, D.S.4
Byrne, M.P.5
Stites, W.E.6
-
21
-
-
0035923433
-
Energetics of side chain packing in staphylococcal nuclease assessed by systematic double mutant cycles
-
Chen J., Stites W.E. Energetics of side chain packing in staphylococcal nuclease assessed by systematic double mutant cycles. Biochemistry. 40:2001;14004-14011
-
(2001)
Biochemistry
, vol.40
, pp. 14004-14011
-
-
Chen, J.1
Stites, W.E.2
-
22
-
-
0035923416
-
Higher-order packing interactions in triple and quadruple mutants of staphylococcal nuclease
-
Chen J., Stites W.E. Higher-order packing interactions in triple and quadruple mutants of staphylococcal nuclease. Biochemistry. 40:2001;14012-14019
-
(2001)
Biochemistry
, vol.40
, pp. 14012-14019
-
-
Chen, J.1
Stites, W.E.2
-
23
-
-
0034692902
-
Increasing the thermostability of staphylococcal nuclease: Implications for the origin of protein thermostability
-
Chen J., Lu Z., Sakon J., Stites W.E. Increasing the thermostability of staphylococcal nuclease: implications for the origin of protein thermostability. J. Mol. Biol. 303:2000;125-130
-
(2000)
J. Mol. Biol.
, vol.303
, pp. 125-130
-
-
Chen, J.1
Lu, Z.2
Sakon, J.3
Stites, W.E.4
-
24
-
-
0032321711
-
Application of automated methods for determination of protein conformational stability
-
Schwehm J.M., Stites W.E. Application of automated methods for determination of protein conformational stability. Methods Enzymol. 295:1998;150-170
-
(1998)
Methods Enzymol.
, vol.295
, pp. 150-170
-
-
Schwehm, J.M.1
Stites, W.E.2
-
25
-
-
0014198139
-
Catalytic properties and specificity of the extracellular nuclease of Staphylococcus aureus
-
Cuatrecasas P., Fuchs S., Anfinsen C.B. Catalytic properties and specificity of the extracellular nuclease of Staphylococcus aureus. J. Biol. Chem. 242:1967;1541-1547
-
(1967)
J. Biol. Chem.
, vol.242
, pp. 1541-1547
-
-
Cuatrecasas, P.1
Fuchs, S.2
Anfinsen, C.B.3
-
26
-
-
3543012707
-
Crystallography and NMR system: A new software suite for macromolecular structure determination
-
Brunger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., Grosse-Kunstleve R.W., Jiang J.S., Kuszewski J., Nilges M., Pannu N.S., Read R.J., Rice L.M., Simonson T., Warren G.L. Crystallography and NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr., D Biol. Crystallogr. 54(Pt 5):1998;905-921
-
(1998)
Acta Crystallogr., D Biol. Crystallogr.
, vol.54
, Issue.PART 5
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
27
-
-
0025126043
-
Strategy for analysing the co-operativity of intramolecular interactions in peptides and proteins
-
Horovitz A., Fersht A.R. Strategy for analysing the co-operativity of intramolecular interactions in peptides and proteins. J. Mol. Biol. 214:1990;613-617
-
(1990)
J. Mol. Biol.
, vol.214
, pp. 613-617
-
-
Horovitz, A.1
Fersht, A.R.2
-
28
-
-
0029584358
-
The meaning of component analysis: Decomposition of the free energy in terms of specific interactions
-
Boresch S., Karplus M. The meaning of component analysis: decomposition of the free energy in terms of specific interactions. J. Mol. Biol. 254:1995;801-807
-
(1995)
J. Mol. Biol.
, vol.254
, pp. 801-807
-
-
Boresch, S.1
Karplus, M.2
-
29
-
-
0028334097
-
Decomposition of the free energy of a system in terms of specific interactions. Implications for theoretical and experimental studies
-
Mark A.E., van Gunsteren W.F. Decomposition of the free energy of a system in terms of specific interactions. Implications for theoretical and experimental studies. J. Mol. Biol. 240:1994;167-176
-
(1994)
J. Mol. Biol.
, vol.240
, pp. 167-176
-
-
Mark, A.E.1
Van Gunsteren, W.F.2
-
30
-
-
0024316597
-
2+, and the inhibitor pdTp, refined at 1.65 a
-
2+, and the inhibitor pdTp, refined at 1.65 A. Proteins. 5:1989;183-201
-
(1989)
Proteins
, vol.5
, pp. 183-201
-
-
Loll, P.J.1
Lattman, E.E.2
-
31
-
-
0029085470
-
Interactions in nonnative and truncated forms of staphylococcal nuclease as indicated by mutational free energy changes
-
Wynn R., Anderson C.L., Richards F.M., Fox R.O. Interactions in nonnative and truncated forms of staphylococcal nuclease as indicated by mutational free energy changes. Protein Sci. 4:1995;1815-1823
-
(1995)
Protein Sci.
, vol.4
, pp. 1815-1823
-
-
Wynn, R.1
Anderson, C.L.2
Richards, F.M.3
Fox, R.O.4
-
32
-
-
0029977512
-
Mobile unnatural amino acid side chains in the core of staphylococcal nuclease
-
Wynn R., Harkins P.C., Richards F.M., Fox R.O. Mobile unnatural amino acid side chains in the core of staphylococcal nuclease. Protein Sci. 5:1996;1026-1031
-
(1996)
Protein Sci.
, vol.5
, pp. 1026-1031
-
-
Wynn, R.1
Harkins, P.C.2
Richards, F.M.3
Fox, R.O.4
-
33
-
-
0030762019
-
Comparison of straight chain and cyclic unnatural amino acids embedded in the core of staphylococcal nuclease
-
Wynn R., Harkins P.C., Richards F.M., Fox R.O. Comparison of straight chain and cyclic unnatural amino acids embedded in the core of staphylococcal nuclease. Protein Sci. 6:1997;1621-1626
-
(1997)
Protein Sci.
, vol.6
, pp. 1621-1626
-
-
Wynn, R.1
Harkins, P.C.2
Richards, F.M.3
Fox, R.O.4
-
34
-
-
0029124248
-
Molten globule and protein folding
-
Ptitsyn O.B. Molten globule and protein folding. Adv. Protein Chem. 47:1995;83-229
-
(1995)
Adv. Protein Chem.
, vol.47
, pp. 83-229
-
-
Ptitsyn, O.B.1
-
35
-
-
0029040449
-
Thermodynamic stability of the molten globule states of apomyoglobin
-
Nishii I., Kataoka M., Goto Y. Thermodynamic stability of the molten globule states of apomyoglobin. J. Mol. Biol. 250:1995;223-238
-
(1995)
J. Mol. Biol.
, vol.250
, pp. 223-238
-
-
Nishii, I.1
Kataoka, M.2
Goto, Y.3
-
36
-
-
0027980359
-
Molecular basis of cooperativity in protein folding: V. Thermodynamic and structural conditions for the stabilization of compact denatured states
-
Xie D., Freire E. Molecular basis of cooperativity in protein folding: V. Thermodynamic and structural conditions for the stabilization of compact denatured states. Proteins. 19:1994;291-301
-
(1994)
Proteins
, vol.19
, pp. 291-301
-
-
Xie, D.1
Freire, E.2
-
37
-
-
0022445353
-
Physical nature of the phase transition in globular proteins. Calorimetric study of human alpha-lactalbumin
-
Pfeil W., Bychkova V.E., Ptitsyn O.B. Physical nature of the phase transition in globular proteins. Calorimetric study of human alpha-lactalbumin. FEBS Lett. 198:1986;287-291
-
(1986)
FEBS Lett.
, vol.198
, pp. 287-291
-
-
Pfeil, W.1
Bychkova, V.E.2
Ptitsyn, O.B.3
-
38
-
-
0022370492
-
Compact state of a protein molecule with pronounced small-scale mobility: Bovine alpha-lactalbumin
-
Dolgikh D.A., Abaturov L.V., Bolotina I.A., Brazhnikov E.V., Bychkova V.E., Gilmanshin R.I., Lebedev Yu O., Semisotnov G.V., Tiktopulo E.I., Ptitsyn O.B., et al. Compact state of a protein molecule with pronounced small-scale mobility: bovine alpha-lactalbumin. Eur. Biophys. J. 13:1985;109-121
-
(1985)
Eur. Biophys. J.
, vol.13
, pp. 109-121
-
-
Dolgikh, D.A.1
Abaturov, L.V.2
Bolotina, I.A.3
Brazhnikov, E.V.4
Bychkova, V.E.5
Gilmanshin, R.I.6
Lebedev Yu, O.7
Semisotnov, G.V.8
Tiktopulo, E.I.9
Ptitsyn, O.B.10
-
39
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
Kraulis P.J. MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J. Appl. Crystallogr. 24:1991;946-950
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
|