-
1
-
-
0025049209
-
A functional ribonucleoprotein complex forms around the 5′ end of poliovirus RNA
-
Andino, R., Rieckhof, G. E. & Baltimore, D. (1990). A functional ribonucleoprotein complex forms around the 5′ end of poliovirus RNA. Cell 63, 369-380.
-
(1990)
Cell
, vol.63
, pp. 369-380
-
-
Andino, R.1
Rieckhof, G.E.2
Baltimore, D.3
-
2
-
-
0029155434
-
Complete replication of poliovirus in vitro: Preinitiation RNA replication complexes require soluble cellular factors for the synthesis of VPg-linked RNA
-
Barton, D. J., Black, E. P. & Flanegan, J. B. (1995). Complete replication of poliovirus in vitro: preinitiation RNA replication complexes require soluble cellular factors for the synthesis of VPg-linked RNA. J Virol 69, 5516-5527.
-
(1995)
J Virol
, vol.69
, pp. 5516-5527
-
-
Barton, D.J.1
Black, E.P.2
Flanegan, J.B.3
-
3
-
-
0035868852
-
5′ cloverleaf in poliovirus RNA is a cis-acting replication element required for negative-strand synthesis
-
Barton, D. J., O'Donnell, B. J. & Flanegan, J. B. (2001). 5′ cloverleaf in poliovirus RNA is a cis-acting replication element required for negative-strand synthesis. EMBO J 20, 1439-1448.
-
(2001)
EMBO J
, vol.20
, pp. 1439-1448
-
-
Barton, D.J.1
O'Donnell, B.J.2
Flanegan, J.B.3
-
4
-
-
22844440540
-
Trans-dominant inhibition of RNA viral replication can slow growth of drug-resistant viruses
-
Crowder, S. & Kirkegaard, K. (2005). Trans-dominant inhibition of RNA viral replication can slow growth of drug-resistant viruses. Nat Genet 37, 701-709.
-
(2005)
Nat Genet
, vol.37
, pp. 701-709
-
-
Crowder, S.1
Kirkegaard, K.2
-
5
-
-
0032146721
-
Switch from translation to RNA replication in a positive-stranded RNA virus
-
Gamarnik, A. V. & Andino, R. (1998). Switch from translation to RNA replication in a positive-stranded RNA virus. Genes Dev 12, 2293-2304.
-
(1998)
Genes Dev
, vol.12
, pp. 2293-2304
-
-
Gamarnik, A.V.1
Andino, R.2
-
7
-
-
0033212780
-
pol) by ubiquitin-protease-mediated cleavage in Escherichia coli
-
pol) by ubiquitin-protease-mediated cleavage in Escherichia coli. Protein Expr Purif 17, 128-138.
-
(1999)
Protein Expr Purif
, vol.17
, pp. 128-138
-
-
Gohara, D.W.1
Ha, C.S.2
Kumar, S.3
Ghosh, B.4
Arnold, J.J.5
Wisniewski, T.J.6
Cameron, C.E.7
-
8
-
-
0034003829
-
Identification of a cis-acting replication element within the poliovirus coding region
-
Goodfellow, I., Chaudhry, Y., Richardson, A., Meredith, J., Almond, J. W., Barclay, W. & Evans, D. J. (2000). Identification of a cis-acting replication element within the poliovirus coding region. J Virol 74, 4590-4600.
-
(2000)
J Virol
, vol.74
, pp. 4590-4600
-
-
Goodfellow, I.1
Chaudhry, Y.2
Richardson, A.3
Meredith, J.4
Almond, J.W.5
Barclay, W.6
Evans, D.J.7
-
9
-
-
0037276580
-
Structure and function analysis of the poliovirus cis-acting replication element (CRE)
-
Goodfellow, I. G., Kerrigan, D. & Evans, D. J. (2003a). Structure and function analysis of the poliovirus cis-acting replication element (CRE). RNA 9, 124-137.
-
(2003)
RNA
, vol.9
, pp. 124-137
-
-
Goodfellow, I.G.1
Kerrigan, D.2
Evans, D.J.3
-
10
-
-
0041351978
-
The poliovirus 2C cis-acting replication element-mediated uridylylation of VPg is not required for synthesis of negative-sense genomes
-
Goodfellow, I. G., Polacek, C., Andino, R. & Evans, D. J. (2003b). The poliovirus 2C cis-acting replication element-mediated uridylylation of VPg is not required for synthesis of negative-sense genomes. J Gen Virol 84, 2359-2363.
-
(2003)
J Gen Virol
, vol.84
, pp. 2359-2363
-
-
Goodfellow, I.G.1
Polacek, C.2
Andino, R.3
Evans, D.J.4
-
11
-
-
0033919960
-
Poliovirus requires a precise 5′ end for efficient positive-strand RNA synthesis
-
Herold, J. & Andino, R. (2000). Poliovirus requires a precise 5′ end for efficient positive-strand RNA synthesis. J Virol 74, 6394-6400.
-
(2000)
J Virol
, vol.74
, pp. 6394-6400
-
-
Herold, J.1
Andino, R.2
-
12
-
-
0035265836
-
Poliovirus RNA replication requires genome circularization through a protein-protein bridge
-
Herold, J. & Andino, R. (2001). Poliovirus RNA replication requires genome circularization through a protein-protein bridge. Mol Cell 7, 581-591.
-
(2001)
Mol Cell
, vol.7
, pp. 581-591
-
-
Herold, J.1
Andino, R.2
-
13
-
-
0025212682
-
Complete nucleotide sequence of infectious coxsackievirus B3 cDNA: Two initial 5′ uridine residues are regained during plus-strand RNA synthesis
-
Klump, W. M., Bergmann, I., Müller, B. C., Ameis, D. & Kandolf, R. (1990). Complete nucleotide sequence of infectious coxsackievirus B3 cDNA: two initial 5′ uridine residues are regained during plus-strand RNA synthesis. J Virol 64, 1573-1583.
-
(1990)
J Virol
, vol.64
, pp. 1573-1583
-
-
Klump, W.M.1
Bergmann, I.2
Müller, B.C.3
Ameis, D.4
Kandolf, R.5
-
14
-
-
0033613152
-
A coding RNA sequence acts as a replication signal in cardioviruses
-
Lobert, P.-E., Escriou, N., Ruelle, J. & Michiels, T. (1999). A coding RNA sequence acts as a replication signal in cardioviruses. Proc Natl Acad Sci U S A 96, 11560-11565.
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, pp. 11560-11565
-
-
Lobert, P.-E.1
Escriou, N.2
Ruelle, J.3
Michiels, T.4
-
15
-
-
0034740269
-
Poliovirus 5′-terminal cloverleaf RNA is required in cis for VPg uridylylation and the initiation of negative-strand RNA synthesis
-
Lyons, T., Murray, K. E., Roberts, A. W. & Barton, D. J. (2001). Poliovirus 5′-terminal cloverleaf RNA is required in cis for VPg uridylylation and the initiation of negative-strand RNA synthesis. J Virol 75, 10696-10708.
-
(2001)
J Virol
, vol.75
, pp. 10696-10708
-
-
Lyons, T.1
Murray, K.E.2
Roberts, A.W.3
Barton, D.J.4
-
16
-
-
0036776467
-
Identification and characterization of a cis-acting replication element (cre) adjacent to the internal ribosome entry site of foot-and-mouth disease virus
-
Mason, P. W., Bezborodova, S. V. & Henry, T. M. (2002). Identification and characterization of a cis-acting replication element (cre) adjacent to the internal ribosome entry site of foot-and-mouth disease virus. J Virol 76, 9686-9694.
-
(2002)
J Virol
, vol.76
, pp. 9686-9694
-
-
Mason, P.W.1
Bezborodova, S.V.2
Henry, T.M.3
-
17
-
-
0031762554
-
The rhinovirus type 14 genome contains an internally located RNA structure that is required for viral replication
-
McKnight, K. L. & Lemon, S. M. (1998). The rhinovirus type 14 genome contains an internally located RNA structure that is required for viral replication. RNA 4, 1569-1584.
-
(1998)
RNA
, vol.4
, pp. 1569-1584
-
-
McKnight, K.L.1
Lemon, S.M.2
-
18
-
-
0031060472
-
Kissing of the two predominant hairpin loops in the coxsackie B virus 3′ untranslated region is the essential structural feature of the origin of replication required for negative-strand RNA synthesis
-
Melchers, W. J. G., Hoenderop, J. G. J., Bruins Slot, H. J., Pleij, C. W. A., Pilipenko, E. V., Agol, V. I. & Galama, J. M. D. (1997). Kissing of the two predominant hairpin loops in the coxsackie B virus 3′ untranslated region is the essential structural feature of the origin of replication required for negative-strand RNA synthesis. J Virol 71, 686-696.
-
(1997)
J Virol
, vol.71
, pp. 686-696
-
-
Melchers, W.J.G.1
Hoenderop, J.G.J.2
Bruins Slot, H.J.3
Pleij, C.W.A.4
Pilipenko, E.V.5
Agol, V.I.6
Galama, J.M.D.7
-
19
-
-
0033942925
-
Cross-talk between orientation-dependent recognition determinants of a complex control RNA element, the enterovirus oriR
-
Melchers, W. J. G., Bakkers, J. M. J. E., Bruins Slot, H. J., Galama, J. M. D., Agol, V. I. & Pilipenko, E. V. (2000). Cross-talk between orientation-dependent recognition determinants of a complex control RNA element, the enterovirus oriR. RNA 6, 976-987.
-
(2000)
RNA
, vol.6
, pp. 976-987
-
-
Melchers, W.J.G.1
Bakkers, J.M.J.E.2
Bruins Slot, H.J.3
Galama, J.M.D.4
Agol, V.I.5
Pilipenko, E.V.6
-
20
-
-
0036776338
-
Biological significance of a human enterovirus B-specific RNA element in the 3′ nontranslated region
-
Merkle, I., van Ooij, M. J. M., van Kuppeveld, F. J. M., Glaudemans, D. H. R. F., Galama, J. M. D., Henke, A., Zell, R. & Melchers, W. J. G. (2002). Biological significance of a human enterovirus B-specific RNA element in the 3′ nontranslated region. J Virol 76, 9900-9909.
-
(2002)
J Virol
, vol.76
, pp. 9900-9909
-
-
Merkle, I.1
van Ooij, M.J.M.2
van Kuppeveld, F.J.M.3
Glaudemans, D.H.R.F.4
Galama, J.M.D.5
Henke, A.6
Zell, R.7
Melchers, W.J.G.8
-
21
-
-
0031054247
-
An RNA tertiary structure in the 3′ untranslated region of enteroviruses is necessary for efficient replication
-
Mirmomeni, M. H., Hughes, P. J. & Stanway, G. (1997). An RNA tertiary structure in the 3′ untranslated region of enteroviruses is necessary for efficient replication. J Virol 71, 2363-2370.
-
(1997)
J Virol
, vol.71
, pp. 2363-2370
-
-
Mirmomeni, M.H.1
Hughes, P.J.2
Stanway, G.3
-
22
-
-
0026325508
-
Cell-free, de novo synthesis of poliovirus
-
Molla, A., Paul, A. V. & Wimmer, E. (1991). Cell-free, de novo synthesis of poliovirus. Science 254, 1647-1651.
-
(1991)
Science
, vol.254
, pp. 1647-1651
-
-
Molla, A.1
Paul, A.V.2
Wimmer, E.3
-
23
-
-
0037405928
-
Poliovirus cre(2C)-dependent synthesis of VPgpUpU is required for positive- but not negative-strand RNA synthesis
-
Morasco, B. J., Sharma, N., Parilla, J. & Flanegan, J. B. (2003). Poliovirus cre(2C)-dependent synthesis of VPgpUpU is required for positive- but not negative-strand RNA synthesis. J Virol 77, 5136-5144.
-
(2003)
J Virol
, vol.77
, pp. 5136-5144
-
-
Morasco, B.J.1
Sharma, N.2
Parilla, J.3
Flanegan, J.B.4
-
24
-
-
0037383425
-
Poliovirus CRE-dependent VPg uridylylation is required for positive-strand RNA synthesis but not for negative-strand RNA synthesis
-
Murray, K. E. & Barton, D. J. (2003). Poliovirus CRE-dependent VPg uridylylation is required for positive-strand RNA synthesis but not for negative-strand RNA synthesis. J Virol 77, 4739-4750.
-
(2003)
J Virol
, vol.77
, pp. 4739-4750
-
-
Murray, K.E.1
Barton, D.J.2
-
26
-
-
0017755777
-
The location of the polio genome protein in viral RNAs and its implication for RNA synthesis
-
Nomoto, A., Detjen, B., Pozzatti, R. & Wimmer, E. (1977a). The location of the polio genome protein in viral RNAs and its implication for RNA synthesis. Nature 268, 208-213.
-
(1977)
Nature
, vol.268
, pp. 208-213
-
-
Nomoto, A.1
Detjen, B.2
Pozzatti, R.3
Wimmer, E.4
-
27
-
-
0017681842
-
The 5′-terminal structures of poliovirion RNA and poliovirus mRNA differ only in the genome-linked protein VPg
-
Nomoto, A., Kitamura, N., Golini, F. & Wimmer, E. (1977b). The 5′-terminal structures of poliovirion RNA and poliovirus mRNA differ only in the genome-linked protein VPg. Proc Natl Acad Sci U S A 74, 5345-5349.
-
(1977)
Proc Natl Acad Sci U S A
, vol.74
, pp. 5345-5349
-
-
Nomoto, A.1
Kitamura, N.2
Golini, F.3
Wimmer, E.4
-
28
-
-
0032554886
-
Protein-primed RNA synthesis by purified poliovirus RNA polymerase
-
Paul, A. V., van Boom, J. H., Filippov, D. & Wimmer, E. (1998). Protein-primed RNA synthesis by purified poliovirus RNA polymerase. Nature 393, 280-284.
-
(1998)
Nature
, vol.393
, pp. 280-284
-
-
Paul, A.V.1
van Boom, J.H.2
Filippov, D.3
Wimmer, E.4
-
29
-
-
0033766003
-
Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg
-
Paul, A. V., Rieder, E., Kim, D. W., van Boom, J. H. & Wimmer, E. (2000). Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg. J Virol 74, 10359-10370.
-
(2000)
J Virol
, vol.74
, pp. 10359-10370
-
-
Paul, A.V.1
Rieder, E.2
Kim, D.W.3
van Boom, J.H.4
Wimmer, E.5
-
30
-
-
0242415195
-
A "slide-back" mechanism for the initiation of protein-primed RNA synthesis by the RNA polymerase of poliovirus
-
Paul, A. V., Yin, J., Mugavero, J., Rieder, E., Liu, Y. & Wimmer, E. (2003). A "slide-back" mechanism for the initiation of protein-primed RNA synthesis by the RNA polymerase of poliovirus. J Biol Chem 278, 43951-43960.
-
(2003)
J Biol Chem
, vol.278
, pp. 43951-43960
-
-
Paul, A.V.1
Yin, J.2
Mugavero, J.3
Rieder, E.4
Liu, Y.5
Wimmer, E.6
-
31
-
-
0018148709
-
Identification of a protein linked to nascent poliovirus RNA and to the polyuridylic acid of negative-strand RNA
-
Pettersson, R. F., Ambros, V. & Baltimore, D. (1978). Identification of a protein linked to nascent poliovirus RNA and to the polyuridylic acid of negative-strand RNA. J Virol 27, 357-365.
-
(1978)
J Virol
, vol.27
, pp. 357-365
-
-
Pettersson, R.F.1
Ambros, V.2
Baltimore, D.3
-
32
-
-
0029838843
-
Cis-element, oriR, involved in the initiation of (-) strand poliovirus RNA: A quasi-globular multi-domain RNA structure maintained by tertiary ('kissing') interactions
-
Pilipenko, E. V., Poperechny, K. V., Maslova, S. V., Melchers, W. J. G., Bruins Slot, H. J. & Agol, V. I. (1996). Cis-element, oriR, involved in the initiation of (-) strand poliovirus RNA: a quasi-globular multi-domain RNA structure maintained by tertiary ('kissing') interactions. EMBO J 15, 5428-5436.
-
(1996)
EMBO J
, vol.15
, pp. 5428-5436
-
-
Pilipenko, E.V.1
Poperechny, K.V.2
Maslova, S.V.3
Melchers, W.J.G.4
Bruins Slot, H.J.5
Agol, V.I.6
-
33
-
-
33745158157
-
A simple method of estimating fifty percent endpoints
-
Reed, L. J. & Muench, H. (1938). A simple method of estimating fifty percent endpoints. Am J Hyg 27, 493-497.
-
(1938)
Am J Hyg
, vol.27
, pp. 493-497
-
-
Reed, L.J.1
Muench, H.2
-
34
-
-
0033755326
-
Genetic and biochemical studies of poliovirus cis-acting replication element cre in relation to VPg uridylylation
-
Rieder, E., Paul, A. V., Kim, D. W., van Boom, J. H. & Wimmer, E. (2000). Genetic and biochemical studies of poliovirus cis-acting replication element cre in relation to VPg uridylylation. J Virol 74, 10371-10380.
-
(2000)
J Virol
, vol.74
, pp. 10371-10380
-
-
Rieder, E.1
Paul, A.V.2
Kim, D.W.3
van Boom, J.H.4
Wimmer, E.5
-
35
-
-
4344672705
-
High-resolution structure of a picornaviral internal cis-acting RNA replication element (cre)
-
Thiviyanathan, V., Yang, Y., Kaluarachchi, K., Rijnbrand, R., Gorenstein, D. G. & Lemon, S. M. (2004). High-resolution structure of a picornaviral internal cis-acting RNA replication element (cre). Proc Natl Acad Sci U S A 101, 12688-12693.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 12688-12693
-
-
Thiviyanathan, V.1
Yang, Y.2
Kaluarachchi, K.3
Rijnbrand, R.4
Gorenstein, D.G.5
Lemon, S.M.6
-
36
-
-
0028871749
-
Genetic analysis of a hydrophobic domain of coxsackie B3 virus protein 2B: A moderate degree of hydrophobicity is required for a cis-acting function in viral RNA synthesis
-
van Kuppeveld, F. J. M., Galama, J. M. D., Zoll, J. & Melchers, W. J. G. (1995). Genetic analysis of a hydrophobic domain of coxsackie B3 virus protein 2B: a moderate degree of hydrophobicity is required for a cis-acting function in viral RNA synthesis. J Virol 69, 7782-7790.
-
(1995)
J Virol
, vol.69
, pp. 7782-7790
-
-
van Kuppeveld, F.J.M.1
Galama, J.M.D.2
Zoll, J.3
Melchers, W.J.G.4
-
37
-
-
0030928285
-
Coxsackievirus protein 2B modifies endoplasmic reticulum membrane and plasma membrane permeability and facilitates virus release
-
van Kuppeveld, F. J. M., Hoenderop, J. G. J., Smeets, R. L. L., Willems, P. H. G. M., Dijkman, H. B. P. M., Galama, J. M. D. & Melchers, W. J. G. (1997). Coxsackievirus protein 2B modifies endoplasmic reticulum membrane and plasma membrane permeability and facilitates virus release. EMBO J 16, 3519-3532.
-
(1997)
EMBO J
, vol.16
, pp. 3519-3532
-
-
van Kuppeveld, F.J.M.1
Hoenderop, J.G.J.2
Smeets, R.L.L.3
Willems, P.H.G.M.4
Dijkman, H.B.P.M.5
Galama, J.M.D.6
Melchers, W.J.G.7
-
38
-
-
0033555905
-
Structural requirements of the higher order RNA kissing element in the enteroviral 3′UTR
-
Wang, J., Bakkers, J. M. J. E., Galama, J. M. D., Bruins Slot, H. J., Pilipenko, E. V., Agol, V. I. & Melchers, W. J. G. (1999). Structural requirements of the higher order RNA kissing element in the enteroviral 3′UTR. Nucleic Acids Res 27, 485-490.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 485-490
-
-
Wang, J.1
Bakkers, J.M.J.E.2
Galama, J.M.D.3
Bruins Slot, H.J.4
Pilipenko, E.V.5
Agol, V.I.6
Melchers, W.J.G.7
-
39
-
-
0027133067
-
Genetics of poliovirus
-
Wimmer, E., Hellen, C. U. T. & Cao, X. (1993). Genetics of poliovirus. Annu Rev Genet 27, 353-436.
-
(1993)
Annu Rev Genet
, vol.27
, pp. 353-436
-
-
Wimmer, E.1
Hellen, C.U.T.2
Cao, X.3
-
40
-
-
0035945235
-
Conserved RNA secondary structures in Picornaviridae genomes
-
Witwer, C., Rauscher, S., Hofacker, I. L. & Stadler, P. F. (2001). Conserved RNA secondary structures in Picornaviridae genomes. Nucleic Acids Res 29, 5079-5089.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 5079-5089
-
-
Witwer, C.1
Rauscher, S.2
Hofacker, I.L.3
Stadler, P.F.4
-
41
-
-
0036314310
-
Sequence requirements for viral RNA replication and VPg uridylylation directed by the internal cis-acting replication element (cre) of human rhinovirus type 14
-
Yang, Y., Rijnbrand, R., McKnight, K. L., Wimmer, E., Paul, A., Martin, A. & Lemon, S. M. (2002). Sequence requirements for viral RNA replication and VPg uridylylation directed by the internal cis-acting replication element (cre) of human rhinovirus type 14. J Virol 76, 7485-7494.
-
(2002)
J Virol
, vol.76
, pp. 7485-7494
-
-
Yang, Y.1
Rijnbrand, R.2
McKnight, K.L.3
Wimmer, E.4
Paul, A.5
Martin, A.6
Lemon, S.M.7
-
42
-
-
0037405787
-
Functional dissection of a poliovirus cis-acting replication element [PV-cre(2C)]: Analysis of single- and dual-cre viral genomes and proteins that bind specifically to PV-cre RNA
-
Yin, J., Paul, A. V., Wimmer, E. & Rieder, E. (2003). Functional dissection of a poliovirus cis-acting replication element [PV-cre(2C)]: analysis of single- and dual-cre viral genomes and proteins that bind specifically to PV-cre RNA. J Virol 77, 5152-5166.
-
(2003)
J Virol
, vol.77
, pp. 5152-5166
-
-
Yin, J.1
Paul, A.V.2
Wimmer, E.3
Rieder, E.4
-
43
-
-
0002287019
-
Algorithms and thermodynamics for RNA secondary structure prediction: A practical guide
-
Edited by J. Barciszewski & B. F. C. Clark. Dordrecht: Kluwer
-
Zuker, M., Mathews, D. H. & Turner, D. H. (1999). Algorithms and thermodynamics for RNA secondary structure prediction: a practical guide. In RNA Biochemistry and Biotechnology, pp. 11-43. Edited by J. Barciszewski & B. F. C. Clark. Dordrecht: Kluwer.
-
(1999)
RNA Biochemistry and Biotechnology
, pp. 11-43
-
-
Zuker, M.1
Mathews, D.H.2
Turner, D.H.3
|