TEM-EELS study of natural ferrihydrite from geological-biological interactions in hydrothermal systems

Earth and Planetary Science Letters

Volumn 222, Issue 3-4, 2004, Pages 947-957

  Gloter, A ^a   Zbinden, M ^b   Guyot, F ^c   Gaill, F ^b   Colliex, C ^a  

^a UNIVERSITÉ PARIS SUD   (France)

^b Universite Pierre et Marie Curie ^*  (France)

^c UNIVERSITÉ PIERRE ET MARIE CURIE   (France)

Author keywords

Ferrihydrite; Hydrothermal vents; TEM

Indexed keywords

FERRIHYDRITE; GEOMICROBIOLOGY; HYDROTHERMAL SYSTEM; HYDROTHERMAL VENT COMMUNITY;

ATLANTIC OCEAN; MID-ATLANTIC RIDGE;

EID: 2942605682     PISSN: 0012821X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.epsl.2004.03.040     Document Type: Article

References (55)

1. Corliss J. Dymond J. Gordon L. Edmond J. Von Herzen R. Ballard R. Kenneth G. Williams D. Bainbridge A. Crane K. Van Andel T. Submarine thermal springs on the Galapagos Rift Science 203 1979 1073-1083
2. Von Damm K. Controls on the chemistry and temporal variability of seafloor hydrothermal fluids Humphris S. Zierenberg R. Mullineaux L. Thomson R. Seafloor Hydrothermal Systems Physical, Chemical, Biological and Geological Interactions 1995 222-247 American Geophysical Union Washington
3. Gaill F. Hunt S. The biology of Annelid worms from high temperature hydrothermal vent regions Reviews in Aquatic Sciences 4 1991 107-137
4. Tunnicliffe V. Juniper S.K. Dynamic character of the hydrothermal vent habitat and the nature of sulphide chimney fauna Progress in Oceanography 24 1990 1-13
5. Juniper S. Tebo B. Microbe-metal interactions and mineral deposition at hydrothermal vents Karl D. The Microbiology of Deep-Sea Hydrothermal Vents 1995 219-253 CRC Press Boca Raton
6. Reysenbach A.L. Longnecker K. Kirshtein J. Novel bacterial and archaeal lineages from an in situ growth chamber deployed at a mid-Atlantic ridge hydrothermal vent Applied and Environmental Microbiology 66 2000 3798-3806
7. Huber J. Butterfield D. Baross J. Bacterial diversity in a subseafloor habitat following a deep-sea volcanic eruption FEMS Microbiology, Ecology 43 2003 393-409
8. Fortin D. Ferris F.G. Scott S.D. Formation of Fe-silicates and Fe-oxides on bacterial surface in samples collected near hydrothermal vents on the southern Ridge in the northeast Pacific Ocean American Mineralogist 83 1998 1399-1408
9. Kennedy C.B. Scott S.D. Ferris F.G. Ultrastructure and potential sub-seafloor evidence of bateriogenic iron oxides from axial volcano, Juan de Fuca Ridge, north-east Pacific Ocean FEMS Microbiology Ecology 1457 2002 1-8
10. Emerson D. Moyer C.L. Neutrophilic Fe-oxidizing bacteria are abundant at the Loihi seamount hydrothermal vents and play a major role in Fe oxide deposition Applied and Environmental Microbiology 68 2002 3085-3093
11. Van Dover C.L. Humphris S.E. Fornari D. Cavanaugh C.M. Collier R. Goffredi S.K. Hashimoto J. Lilley M.D. Reysenbach A.L. Shank T.M. Von Damn K.L. Banta A. Gallant R.M. Gotz D. Geen D. Hall J. Harmer T.L. Hurtado L.A. Johnson P. McKiness Z.P. Meredi C. Biogeography and ecological setting of Indian Ocean hydrothermal vents Science 294 2001 818-823
12. Williams A. Rona P. Two new caridean shrimps (Bresiliidae) from a hydrothermal field on the Mid-Atlantic Ridge Journal of Crustacean Biology 6 3 1986 446-462
13. Segonzac M. de Saint-Laurent M. Casanova B. L'énigme du comportement trophique des crevettes Alvinocarididae des sites hydrothermaux de la dorsale médio-atlantique Cahiers de Biologie Marine 34 1993 535-571
14. Gebruk A. Pimenov N. Savvichev A. Feeding specialization of bresiliid shrimps in the TAG site hydrothermal community Marine Ecology. Progress Series 98 1993 247-253
15. Van Dover C. Fry B. Grassle J. Humphris S. Rona P. Feeding biology of the shrimp Rimicaris exoculata at hydrothermal vents on the Mid-Atlantic Ridge Marine Biology 98 1988 209-216
16. Compère P. Martinez A. Charmantier-Daures M. Toullec J. Goffinet G. Gaill F. Does sulphide detoxication occur in the gills of the hydrothermal vent shrimp. Rimicaris exoculata? Comptes Rendus. Biologies 325 2002 591-596
17. Zbinden M. Cambon-Bonavita M.A. Occurrence of Deferribacterales and Entomoplasmatales in the deep-sea shrimp Rimicaris exoculata gut FEMS Microbiology Ecology 1550 2003 1-8
18. Mavrocordatos D. Fortin D. Quantitative characterization of biotic iron oxides by analytical electron microscopy American Mineralogist 87 2002 940-946
19. Polz M. Cavanaugh C. Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal vent site Proceedings of the National Academy of Sciences of the United States of America 92 1995 7232-7236
20. Polz M. Robinson J. Cavanaugh C. Van Dover C. Trophic ecology of massive shrimp aggregations at a mid-Atlantic Ridge hydrothermal vent site Limnology and Oceanography 43 1998 1631-1638
21. Colliex C. Manoubi T. Ortiz C. Electron energy-loss spectroscopy near-edge structures in the iron-oxygen system Physical Review B 44 1991 11402-11411
22. Egerton R.F. Electron Energy-Loss Spectroscopy in The Electron Microscope 2nd ed. 1996 485 Plenum New York
23. 2,3 edge by parallel electron energy-loss spectroscopy American Mineralogist 84 1999 946-964
24. Wirth R. Water in minerals detectable by electron energy-loss spectroscopy EELS Physic and Chemistry of Minerals 24 1997 561-568
25. 4 (111) surfaces Surface Science 469 2000 144-163
26. Van Aken P.A. Liebscher B. Styrsa V.J. Core level electron energy-loss spectra of minerals: Pre-edge fine structures at the oxygen K-edges Physics and Chemistry of Minerals 25 1998 494-498
27. Van der Laan G. Kirkman I.W. The 2p absorption spectra of 3d transition metal compounds in tetrahedral and octahedral symmetry Journal of Physics of Condensed Matter 4 1992 4189-4204
28. 2,3-edge electron energy-loss near-edge structure spectroscopy Physics and Chemistry of Minerals 25 1998 323-327
29. Garvie L.A.J. Buseck P.R. Ratio of ferrous to ferric iron from nanometre-sized areas in minerals Nature 396 1998 667-669
30. 5 Physical Review B 61 2000 2594-2787
31. Gloter A. Douiri A. Tencé M. Colliex C. Improving energy resolution of EELS spectra: An alternative to the monochromator solution Ultramicroscopy 96 2003 385-400
32. Jolivet J.P. Tronc E. Vayssieres L. Formation of magnetic spinel iron oxide in solution Nanophase Materials Hadjipanayis G.C. Siegel R.W. NATO ASI Series. Series E, Applied Sciences vol. 260 1994 45-48 Kluwer Academic Publishing Dordrecht
33. Jambor J.L. Dutrizac J.E. Occurrence and constitution of natural and synthetic ferrihydrite, a widespread iron oxyhydroxide Chemical Review 98 1998 2549-2585
34. Janney D.E. Cowley J.M. Buseck P.R. Transmission electron microscopy of synthetic 2- and 6-line ferrihydrite Clays and Clay Minerals 58 2000 111-119
35. Janney D.E. Cowley J.M. Buseck P.R. Structure of synthetic 2-line ferrihydrite by electron nanodiffraction American Mineralogist 85 2000 1180-1187
36. Janney D.E. Cowley J.M. Buseck P.R. Structure of synthetic 6-line ferrihydrite by electron nanodiffraction American Mineralogist 86 2001 327-335
37. Fredrickson J.K. Zachara J.M. Kennedy D.W. Dong H. Onstott T.C. Hinman N.W. Li S. Biogenic iron mineralization accompanying the dissimilatory reduction of hydrous ferric oxide by a groundwater bacterium Geochimica et Cosmochimica Acta 62 1998 3239-3257
38. Waychunas G.A. Fuller C. Rea B.A. Davis J.A. Wide angle X-ray scattering (WAXS) study of "two-lines" ferrihydrite structure: Effect of arsenate sorption and counterion variation and comparison with EXAFS results Geochimica et Cosmochimica Acta 60 1996 1765-1781
39. Rea B.A. Davis J.A. Waychunas G.A. Studies of the reactivity of the ferrihydrite surface by iron isotopic exchange and Mossbauer spectroscopy Clays and Clay Minerals 31 1994 277-284
40. Zhao J. Huggins F.E. Feng Z. Lu F. Shah N. Huffman G.P. Structure of nanophase iron oxide catalyst Journal of Catalysis 143 1993 499-509
41. 2 Solutions Containing Different Amounts of Silica, Clays and Clay Minerals 32 (1984) 181-184.
42. Phosphorus has already been reported in ferrihydrite, see T.D.Jarrell, W.M. Jarrell, Phosphorus sorption during iron(II) oxidationin the presence of dissolved silica, Water Resources 34(2000) 3949-3956
43. Ni and Ca substitution in ferrihydrites have been less frequently reported but divalent transition metal ions have retardation effects on the transformations even at levels as low as 2 mol%, see D.A. Dzomback, F.M.M. Morel, Surface Complexation Modeling Hydrous Ferric Oxide; Wiley-Interscience Editor, New York, (1990), p. 331
44. The retardation effect of organic matter has already been described in this system, see reference [33]
45. Iizasa K. Kawasaki K. Maeda K. Matsumoto T. Saito N. Hirai K. Hydrothermal sulfide-bearing Fe-Si oxyhydroxide deposit from the Coriolis Troughs, Vanautu backarc, southwestern Pacific Marine Geology 145 1998 1-21
46. 3 perovskite: A highly oxidised component of the lower mantle Contributions to Mineralogy and Petrology 138 2000 17-26
47. II adsorption Langmuir 8 1992 313-319
48. Hansel C.M. Benner S.G. Neiss J. Dohnalkova A. Kukkadapu R.K. Fendorf S. Secondary mineralization pathways induced by dissimilatory iron reduction of ferrihydrite under advective flow Geochemica et Cosmochimica Acta 67 2003 2977-2992
49. Lechaire J.P. Shillito B. Frébourg G. Gaill F. Elemental characterization of microorganism granules by EFTEM in the tube wall of a deep-sea vent invertebrate Biol. Cell 94 2002 243-249
50. Zbinden M. Martinez I. Guyot F. Cambon-Bonavita M.A. Gaill F. Zinc-iron sulphide mineralization of hydrothermal vent worms European Journal of Mineralogy 13 2001 653-658
51. Zbinden M. LeBris N. Compère P. Martinez I. Guyot F. Gaill F. Mineralogical gradients associated with alvinellids at deep-sea hydrothermal vents Deep-Sea Research 50 2003 269-280
52. Glasauer S. Langley S. Beveridge T.J. Sorption of Fe (hydr)oxides at the surfaces of Shewanella putrefaciens cell-bound fine-grained minerals are not always formed de novo Applied and Environmental Microbiology 67 2001 5544-5550
53. Glasauer S. Langley S. Beveridge T.J. Intracellular iron mineral in a dissimilatory iron-reducing bacterium Nature 295 2002 111-119
54. Dobson J. Nanoscale biogenic iron oxides and neurodegenerative disease FEBS Letters 496 2001 1-5
55. Schüler D. Formation of magnetosomes in magnetotactic bacteria Journal of Molecular and Microbiology Biotechnology 1 1999 79-86