Activation tagging approach in a model legume, Lotus japonicus

Journal of Plant Research

Volumn 118, Issue 6, 2005, Pages 391-399

  Imaizumi, Ryujiro ^a   Sato, Shusei ^b   Kameya, Nanako ^c   Nakamura, Ikuo ^c   Nakamura, Yasukazu ^b   Tabata, Satoshi ^b   Ayabe, Shin Ichi ^a   Aoki, Toshio ^a  

^a NIHON UNIVERSITY   (Japan)

^b KAZUSA DNA RESEARCH INSTITUTE   (Japan)

^c CHIBA UNIVERSITY   (Japan)

Author keywords

Activation tagging; Legume; Lotus japonicus; Thermal asymmetric interlaced (TAIL) PCR

Indexed keywords

SPACER DNA;

ARTICLE; CAULIFLOWER MOSAIC VIRUS; DOMINANT GENE; EXON; GENE; GENE EXPRESSION REGULATION; GENE VECTOR; GENETIC TRANSCRIPTION; GENETICS; GENOME; LOTUS; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PROMOTER REGION; RHIZOBIUM;

BASE SEQUENCE; CAULIMOVIRUS; DNA, INTERGENIC; EXONS; GENE EXPRESSION REGULATION, PLANT; GENES, DOMINANT; GENES, PLANT; GENETIC VECTORS; GENOME, PLANT; LOTUS; MOLECULAR SEQUENCE DATA; MUTAGENESIS, INSERTIONAL; PROMOTER REGIONS (GENETICS); RHIZOBIUM; TRANSCRIPTION, GENETIC;

LOTUS CORNICULATUS VAR. JAPONICUS;

EID: 29244459161     PISSN: 09189440     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10265-005-0231-5     Document Type: Article

References (28)

1. Aoki T, Kamizawa A, Ayabe S (2002) Efficient Agrobacterium-mediated transformation of Lotus japonicus with reliable antibiotic selection. Plant Cell Rep 21:238-243
2. Ahad A, Wolf J, Nick P (2003) Activation-tagged tobacco mutants that are tolerant to antimicrotubular herbicides are cross-resistant to chilling stress. Transgenic Res 12:615-629
3. Akama K, Shiraishi H, Ohta S, Nakamura K, Okada K, Shimura Y (1992) Efficient transformation of Arabidopsis thaliana: comparison of the efficiencies with various organs, plant ecotypes and Agrobacterium strains. Plant Cell Rep 12:7-11
4. Altschul SF, Madden TL, Schaeffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402
5. Busov VB, Meilan R, Pearce DW, Ma C, Rood SB, Strauss SH (2003) Activation tagging of a dominant gibberellin catabolism gene (GA 2-oxidase) from poplar that regulates tree stature. Plant Physiol 132:1283-1291
6. Chalfun-Junior A, Mes JJ, Mlynarova L, Aarts MG, Angenent GC (2003) Low frequency of T-DNA based activation tagging in Arabidopsis is correlated with methylation of CaMV 35S enhancer sequences. FEBS Lett 555:459-463
7. Gamborg OL, Miller RA, Ojima K (1968) Nutrient requirements of suspension cultures of soybean root cells. Exp Cell Res 50:151-158
8. Hayashi H, Czaja I, Lubenow H, Schell J, Walden R (1992) Activation of a plant gene by T-DNA tagging: auxin-independent growth in vitro. Science 258:1350-1353
9. 2, population. DNA Res 8:301-310
10. 1 generation. Plant J 36:421-429
11. Jeong DH, An S, Kang HG, Moon S, Han JJ, Park S, Lee HS, An K, An G (2002) T-DNA insertional mutagenesis for activation tagging in rice. Plant Physiol 130:1636-1644
12. Jingu F, Shirase T, Ohtomo I, Imai A, Komeda Y, Takahashi T (2004) The plant exon finder: a tool for precise detection of exons using a T-DNA-based tagging approach. Genetics 338:267-273
13. Liu YG, Mitsukawa N, Oosumi T, Whittier RF (1995) Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J 8:457-463
14. Marsch-Martinez N, Greco R, Van Arkel G, Herrera-Estrella L, Pereira A (2002) Activation tagging using the En-I maize transposon system in Arabidopsis. Plant Physiol 129:1544-1556
15. Mathews H, Clendennen SK, Caldwell CG, Liu XL, Connors K, Matheis N, Schuster DK, Menasco DJ, Wagoner W, Lightner J, Wagner DR (2003) Activation tagging in tomato identifies a transcriptional regulator of anthocyanin biosynthesis, modification, and transport. Plant Cell 15:1689-1703
16. Mitsuhara I, Ugaki M, Hirochika H, Ohshima M, Murakami T, Gotoh Y, Katayose Y, Nakamura S, Honkura R, Nishimiya S, Ueno K, Mochizuki A, Tanimoto H, Tsugawa H, Otsuki Y, Ohashi Y (1996) Efficient promoter cassettes for enhanced expression of foreign genes in dicotyledonous and monocotyledonous plants. Plant Cell Physiol 37:49-59
17. Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol Plant 15:473-497
18. Nakazawa M, Ichikawa T, Ishikawa A, Kobayashi H, Tsuhara Y, Kawashima M, Suzuki K, Muto S, Matsui M (2003) Activation tagging, a novel tool to dissect the functions of a gene family. Plant J 34:741-750
19. Parniske M (2004) Molecular genetics of the arbuscular mycorrhizal symbiosis. Curr Opin Plant Biol 7:414-421
20. Riely BK, Ane JM, Penmetsa RV, Cook DR (2004) Genetic and genomic analysis in model legumes bring Nod-factor signaling to center stage. Curr Opin Plant Biol 7:408-413
21. Sato S, Kaneko T, Nakamura Y, Asamizu E, Kato T, Tabata S (2001) Structural analysis of a Lotus japonicus genome. I. Sequence features and mapping of fifty-six TAC clones, which cover the 5.4-Mb regions of the genome. DNA Res 8:311-318
22. Schauser L, Handberg K, Sandal N, Stiller J, Thykjr T, Pajuelo E, Nielsen A, Stougaard J (1998) Symbiotic mutants deficient in nodule establishment identified after T-DNA transformation of Lotus japonicus. Mol Gen Genet 259:414-423
23. Schauser L, Roussis A, Stiller J, Stougaard J (1999) A plant regulator controlling development of symbiotic root nodules. Nature 402:191-195
24. van der Fits L, Memelink J (2000) ORCA3, a jasmonate-responsive transcriptional regulator of plant primary and secondary metabolism. Science 289:295-297
25. Webb KJ, Skoslasht L, Nicholson MN, Jorgensen B, Mizen S (2000) Mesorhizobium loti increases root-specific expression of a calcium-binding protein homologue identified by promoter tagging in Lotus japonicus. Mol Plant Microbe Interact 13:606-616
26. Weigel D, Ahn JH, Blzquez MA, Borevitz JO, Christensen SK, Fankhauser C, Ferrndiz C, Kardailsky I, Malancharuvil EJ, Neff MM, Nguyen JT, Sato S, Wang ZY, Xia Y, Dixon RA, Harrison MJ, Lamb CJ, Yanofsky MF, Chory J (2000) Activation tagging in Arabidopsis. Plant Physiol 122:1003-1013
27. Zhang S, Sandal N, Polowick PL, Stiller J, Stougaard J, Fobert PR (2003) Proliferating Floral Organs (Pfo), a Lotus japonicus gene required for specifying floral meristem determinacy and organ identity, encodes an F-box protein. Plant J 33:607-619
28. Zubko E, Adams CJ, Machkov I, Malbeck J, Scollan C, Meyer P (2002) Activation tagging identifies a gene from Petunia hybrida responsible for the production of active cytokinins in plants. Plant J 29:797-808