Design and preliminary analysis of a study to assess intra-device and inter-device variability of fluorescence spectroscopy instruments for detecting cervical neoplasia

Gynecologic Oncology

Volumn 99, Issue 3 SUPPL., 2005, Pages

  Lee, Jong Soo ^a   Shuhatovich, Olga ^b   Price, Roderick ^b   Pikkula, Brian ^b   Follen, Michele ^b,c   McKinnon, Nick ^d   MacAulay, Calum ^d   Knight, Bobby ^a   Richards Kortum, Rebecca ^a   Cox, Dennis D ^a  

^a Rice University   (United States)

^b UNIVERSITY OF TEXAS   (United States)

^c UNIVERSITY OF TEXAS   (United States)

^d BRITISH COLUMBIA CANCER RESEARCH CENTRE   (Canada)

Author keywords

FastEEM; Fluorescence spectroscopy devices; Probe; Quality assurance; Standards; Trial design

Indexed keywords

RHODAMINE; WATER;

ANALYSIS OF VARIANCE; CALIBRATION; CAMERA; CANCER DIAGNOSIS; CHI SQUARE TEST; CLUSTER ANALYSIS; CONFERENCE PAPER; DATA ANALYSIS; DEVICE; FIBER OPTICS; FLUORESCENCE SPECTROSCOPY; LIGHT; MEASUREMENT; MECHANICAL PROBE; PRIORITY JOURNAL; REPRODUCIBILITY; STANDARD; UTERINE CERVIX CARCINOMA IN SITU; VARIANCE;

ANALYSIS OF VARIANCE; CERVICAL INTRAEPITHELIAL NEOPLASIA; CLUSTER ANALYSIS; DATA INTERPRETATION, STATISTICAL; FEMALE; HUMANS; REPRODUCIBILITY OF RESULTS; SPECTROMETRY, FLUORESCENCE; UTERINE CERVICAL NEOPLASMS;

EID: 28844478487     PISSN: 00908258     EISSN: 10956859     Source Type: Journal    
DOI: 10.1016/j.ygyno.2005.07.052     Document Type: Conference Paper

References (16)

1. T.J. Romer, M. Fitzmaurice, R.M. Cothren, R. Richards-Kortum, R. Petras, and M.V. Sivak Jr. Laser-induced fluorescence microscopy of normal colon and dysplasia in colonic adenomas: implications from spectroscopic diagnosis Am. J. Gastroenterol. 90 1 1995 81 87
2. R. Richards-Kortum, and E. Sevick-Muraca Quantitative optical spectroscopy for tissue diagnosis Annu. Rev. Phys. Chem. 47 1996 555 606
3. N. Ramanujan, M.F. Mitchell, A. Mahadevan-Jansen, S.L. Thomsen, G. Staerkel, and A. Malpica Cervical precancer detection using a multi-variate statistical algorithm based on laser-induced fluorescence at multiple excitation wavelengths Photochem. Photobiol. 64 4 1996 720 735
4. E. Svistum, R. Alizadeh-Naderi, A. El-Naggar, R. Jacob, A. Gillenwater, and R. Richards-Kortum Vision enhancement system for detection of oral cavity neoplasia based on autofluorescence Head Neck 26 3 2004 205 215
5. S.K. Chang, Y.N. Mirabel, E.N. Atkinson, D. Cox, A. Malpica, and M. Follen Combined reluctance and fluorescence spectroscopy for in vivo detection of cervical pre-cancer J. Biomed. Opt. 10 2 2005 24031
6. A.C. Rencher Methods of multivariate analysis 2nd ed. 2002 Wiley New York
7. A. Agresti Categorical data analysis Second edition 2002 Wiley New York
8. K.A. Baggerly, J.S. Morris, S.R. Edmonson, and K.A. Baggerly Serum proteomics profiling-A young technology begins to mature Nat. Biotechnol. 23 3 2005 291 292
9. K.A. Baggerly, J.S. Morris, and K.R. Coombes Reproducibility of SELDI-TOF protein patterns in serum: comparing datasets from different experiments Bioinformatics 20 5 2004 777 785
10. K.R. Hess, W. Ahang, K.A. Baggerly, D.N. Stiver, and K.R. Coombes Microarrays: handling the deluge of data and extracting reliable information Trends Biotechnol. 19 11 2001 463 468
11. K.R. Coombes, W.E. Highsmith, T.A. Krogmann, K.A. Baggerly, D.N. Stiver, and L.V. Abruzzo Identifying and quantifying sources of variation in microarray data using high density cDNA membrane arrays J. Comput. Biol. 9 4 2002 655 669
12. L. Ramdas, K.R. Coombes, K. Baggerly, L. Abruzzo, W.E. Highsmith, and T. Krogmann Sources of nonlinearity in cDNA microarray expression experiments Genome Biol. 2 11 2001 [Epub]
13. Coombes KR, Tsavachidis S, Morris JS, Baggerly KA, Hung MC, Kuerer HM. Improved peak detection and quantification of mass spectrometry data acquired from surface-enhanced laser desorption and ionization by denoising spectra with the undecimated discrete wavelet transform. UTMDABTR-001-04 (pdf) at M. D. Anderson Web site for research in biomathematics.
14. K.A. Baggerly, J.S. Morris, S. Edmonson, and K.R. Coombes Signal in noise: can experimental bias explain some results of serum proteomics tests for ovarian cancer? J. Natl. Cancer Inst. 97 6 2005 307 309 [UTMDABTR-008-04 (pdf)]
15. M. Guillaud, D. Cox, K. Adler-Storthz, A. Malpica, G. Staerkel, and J. Matisic Quantitative histopathological analysis of cervical intraepithelial neoplasia sections: methodological issues Cell. Oncol. 26 2004 31 43
16. D. Chiu, M. Guillaud, D. Cox, M. Follen, and C. MacAulay Quality assurance system using statistical process control: an implementation for image cytometry Cell. Oncol. 00 2004 1 17