-
1
-
-
1842591130
-
The regulation of bacterial transcription initiation
-
Browning DF, Busby SJW (2004) The regulation of bacterial transcription initiation. Nat Rev Microbiol 2: 57-65
-
(2004)
Nat Rev Microbiol
, vol.2
, pp. 57-65
-
-
Browning, D.F.1
Busby, S.J.W.2
-
2
-
-
0033538480
-
On the structure and operation of type I DNA restriction enzymes
-
Davies GP, Martin I, Sturrock SS, Cronshaw A, Murray NE, Dryden DTF (1999) On the structure and operation of type I DNA restriction enzymes. J Mol Biol 290: 565-579
-
(1999)
J Mol Biol
, vol.290
, pp. 565-579
-
-
Davies, G.P.1
Martin, I.2
Sturrock, S.S.3
Cronshaw, A.4
Murray, N.E.5
Dryden, D.T.F.6
-
3
-
-
0031049939
-
The in vitro assembly of the EcoKI type I DNA restriction/modification enzyme and its in vivo implications
-
Dryden DTF, Cooper LP, Thorpe PH, Byron O (1997) The in vitro assembly of the EcoKI type I DNA restriction/modification enzyme and its in vivo implications. Biochemistry 36: 1065-1076
-
(1997)
Biochemistry
, vol.36
, pp. 1065-1076
-
-
Dryden, D.T.F.1
Cooper, L.P.2
Thorpe, P.H.3
Byron, O.4
-
4
-
-
0015501748
-
Deoxyribonucleic acid modification and restriction enzymes of Escherichia coli B. 2. Purification, subunit structure, and catalytic properties of the restriction endonuclease
-
Eskin B, Linn S (1972) Deoxyribonucleic acid modification and restriction enzymes of Escherichia coli B. 2. Purification, subunit structure, and catalytic properties of the restriction endonuclease. J Biol Chem 247: 6183-6191
-
(1972)
J Biol Chem
, vol.247
, pp. 6183-6191
-
-
Eskin, B.1
Linn, S.2
-
5
-
-
0031563796
-
The RecBCD enzyme initiation complex for DNA unwinding: Enzyme positioning and DNA opening
-
Farah JA, Smith GR (1997) The RecBCD enzyme initiation complex for DNA unwinding: enzyme positioning and DNA opening. J Mol Biol 272: 699-715
-
(1997)
J Mol Biol
, vol.272
, pp. 699-715
-
-
Farah, J.A.1
Smith, G.R.2
-
6
-
-
0034595208
-
Measuring motion on DNA by the type I restriction endonuclease EcoR1241 using triplex displacement
-
Firman K, Szczelkun MD (2000) Measuring motion on DNA by the type I restriction endonuclease EcoR1241 using triplex displacement. EMBO J 19: 2094-2102
-
(2000)
EMBO J
, vol.19
, pp. 2094-2102
-
-
Firman, K.1
Szczelkun, M.D.2
-
7
-
-
3042579602
-
How do site-specific DNA-binding proteins find their targets?
-
Halford SE, Marko JF (2004) How do site-specific DNA-binding proteins find their targets? Nucleic Acids Res 32: 3040-3052
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 3040-3052
-
-
Halford, S.E.1
Marko, J.F.2
-
10
-
-
0032190284
-
Analysis of the subunit assembly of the type IC restriction-modification enzyme EcoR124I
-
Janscak P, Dryden DTF, Firman K (1998) Analysis of the subunit assembly of the type IC restriction-modification enzyme EcoR124I. Nucleic Acids Res 26: 4439-4445
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 4439-4445
-
-
Janscak, P.1
Dryden, D.T.F.2
Firman, K.3
-
11
-
-
0033522512
-
DNA translocation blockage, a general mechanism of cleavage site selection by type I restriction enzymes
-
Janscak P, MacWilliams MP, Sandmeier U, Nagaraja V, Bickle TA (1999a) DNA translocation blockage, a general mechanism of cleavage site selection by type I restriction enzymes. EMBO J 18: 2638-2647
-
(1999)
EMBO J
, vol.18
, pp. 2638-2647
-
-
Janscak, P.1
MacWilliams, M.P.2
Sandmeier, U.3
Nagaraja, V.4
Bickle, T.A.5
-
12
-
-
0033168103
-
Single amino acid substitutions in the HsdR subunit of the type IB restriction enzyme EcoAI uncouple the DNA translocation and DNA cleavage activities of the enzyme
-
Janscak P, Sandmeier U, Bickle TA (1999b) Single amino acid substitutions in the HsdR subunit of the type IB restriction enzyme EcoAI uncouple the DNA translocation and DNA cleavage activities of the enzyme. Nucleic Acids Res 27: 2638-2643
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 2638-2643
-
-
Janscak, P.1
Sandmeier, U.2
Bickle, T.A.3
-
13
-
-
7444233773
-
Alleviation of restriction by DNA condensation and non-specific DNA binding ligands
-
Keatch SA, Su TJ, Dryden DTF (2004) Alleviation of restriction by DNA condensation and non-specific DNA binding ligands. Nucleic Acids Res 32: 5841-5850
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5841-5850
-
-
Keatch, S.A.1
Su, T.J.2
Dryden, D.T.F.3
-
14
-
-
0037222240
-
Strategies for helicase recruitment and loading in bacteria
-
Konieczny I (2003) Strategies for helicase recruitment and loading in bacteria. EMBO Rep 4: 37-41
-
(2003)
EMBO Rep
, vol.4
, pp. 37-41
-
-
Konieczny, I.1
-
15
-
-
1542328273
-
Nucleosome remodeling: One mechanism, many phenomena?
-
Langst G, Becker PB (2004) Nucleosome remodeling: one mechanism, many phenomena? Biochim Biophys Acta 1677: 58-63
-
(2004)
Biochim Biophys Acta
, vol.1677
, pp. 58-63
-
-
Langst, G.1
Becker, P.B.2
-
16
-
-
0033578322
-
Regulation of endonuclease activity by proteolysis prevents breakage of unmodified bacterial chromosomes by type I restriction enzymes
-
Makovets S, Doronina VA, Murray NE (1999) Regulation of endonuclease activity by proteolysis prevents breakage of unmodified bacterial chromosomes by type I restriction enzymes. Proc Natl Acad Sci USA 96: 9757-9762
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 9757-9762
-
-
Makovets, S.1
Doronina, V.A.2
Murray, N.E.3
-
17
-
-
0348225084
-
Is modification sufficient to protect a bacterial chromosome from a resident restriction endonuclease?
-
Makovets S, Powell LM, Titheradge AJB, Blakely GW, Murray NE (2004) Is modification sufficient to protect a bacterial chromosome from a resident restriction endonuclease? Mol Microbiol 51: 135-147
-
(2004)
Mol Microbiol
, vol.51
, pp. 135-147
-
-
Makovets, S.1
Powell, L.M.2
Titheradge, A.J.B.3
Blakely, G.W.4
Murray, N.E.5
-
18
-
-
17444429639
-
Continuous assays for DNA translocation using fluorescent triplex dissociation: Application to type I restriction endonucleases
-
McClelland SE, Dryden DTF, Szczelkun MD (2005) Continuous assays for DNA translocation using fluorescent triplex dissociation: application to type I restriction endonucleases. J Mol Biol 348: 895-915
-
(2005)
J Mol Biol
, vol.348
, pp. 895-915
-
-
McClelland, S.E.1
Dryden, D.T.F.2
Szczelkun, M.D.3
-
19
-
-
0034130457
-
Type I restriction systems: Sophisticated molecular machines (a legacy of Bertani and Weigle)
-
Murray NE (2000) Type I restriction systems: sophisticated molecular machines (a legacy of Bertani and Weigle). Microbiol Mol Biol Rev 64: 412-434
-
(2000)
Microbiol Mol Biol Rev
, vol.64
, pp. 412-434
-
-
Murray, N.E.1
-
20
-
-
0024512057
-
Characterization of the helicase activity of the Escherichia-coli RecBCD enzyme using a novel helicase assay
-
Roman LJ, Kowalczykowski SC (1989) Characterization of the helicase activity of the Escherichia-coli RecBCD enzyme using a novel helicase assay. Biochemistry 28: 2863-2873
-
(1989)
Biochemistry
, vol.28
, pp. 2863-2873
-
-
Roman, L.J.1
Kowalczykowski, S.C.2
-
21
-
-
3242699635
-
Fast, DNA-sequence independent translocation by FtsK in a single-molecule experiment
-
Saleh OA, Perals C, Barre FX, Allemand JF (2004) Fast, DNA-sequence independent translocation by FtsK in a single-molecule experiment. EMBO J 23: 2430-2439
-
(2004)
EMBO J
, vol.23
, pp. 2430-2439
-
-
Saleh, O.A.1
Perals, C.2
Barre, F.X.3
Allemand, J.F.4
-
22
-
-
4344649856
-
Real-time observation of DNA translocation by the type I restriction modification enzyme EcoR124I
-
Seidel R, van Noort J, van der Scheer C, Bloom JGP, Dekker NH, Dutta CF, Blundell A, Robinson T, Firman K, Dekker C (2004) Real-time observation of DNA translocation by the type I restriction modification enzyme EcoR124I. Nat Struct Mol Biol 11: 838-843
-
(2004)
Nat Struct Mol Biol
, vol.11
, pp. 838-843
-
-
Seidel, R.1
Van Noort, J.2
Van Der Scheer, C.3
Bloom, J.G.P.4
Dekker, N.H.5
Dutta, C.F.6
Blundell, A.7
Robinson, T.8
Firman, K.9
Dekker, C.10
-
23
-
-
9144271294
-
Crystal structure of RecBCD enzyme reveals a machine for processing DNA breaks
-
Singleton MR, Dillingham MS, Gaudier M, Kowalczykowski SC, Wigley DB (2004) Crystal structure of RecBCD enzyme reveals a machine for processing DNA breaks. Nature 432: 187-193
-
(2004)
Nature
, vol.432
, pp. 187-193
-
-
Singleton, M.R.1
Dillingham, M.S.2
Gaudier, M.3
Kowalczykowski, S.C.4
Wigley, D.B.5
-
24
-
-
0141891451
-
Initiation of DNA replication: Lessons from viral initiator proteins
-
Stenlund A (2003) Initiation of DNA replication: lessons from viral initiator proteins. Nat Rev Mol Cell Biol 4: 777-785
-
(2003)
Nat Rev Mol Cell Biol
, vol.4
, pp. 777-785
-
-
Stenlund, A.1
-
26
-
-
0023732866
-
Model for how type-I restriction enzymes select cleavage sites in DNA
-
Studier FW, Bandyopadhyay PK (1988) Model for how type-I restriction enzymes select cleavage sites in DNA. Proc Natl Acad Sci USA 85: 4677-4681
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 4677-4681
-
-
Studier, F.W.1
Bandyopadhyay, P.K.2
-
27
-
-
0021400210
-
The EcoA restriction and modification system of Escherichia coli 15T: Enzyme structure and DNA recognition sequence
-
Suri B, Shepherd JCW, Bickle TA (1984) The EcoA restriction and modification system of Escherichia coli 15T: enzyme structure and DNA recognition sequence. EMBO J 3: 575-579
-
(1984)
EMBO J
, vol.3
, pp. 575-579
-
-
Suri, B.1
Shepherd, J.C.W.2
Bickle, T.A.3
-
28
-
-
0031559573
-
Selection of non-specific DNA cleavage sites by the type IC restriction endonuclease EcoR124I
-
Szczelkun MD, Janscak P, Firman K, Halford SE (1997) Selection of non-specific DNA cleavage sites by the type IC restriction endonuclease EcoR124I. J Mol Biol 271: 112-123
-
(1997)
J Mol Biol
, vol.271
, pp. 112-123
-
-
Szczelkun, M.D.1
Janscak, P.2
Firman, K.3
Halford, S.E.4
-
29
-
-
19444384194
-
DNA-tension dependence of restriction enzyme activity reveals mechanochemical properties of the reaction pathway
-
van den Broek B, Noom MC, Wuite GJL (2005) DNA-tension dependence of restriction enzyme activity reveals mechanochemical properties of the reaction pathway. Nucleic Acids Res 33: 2676-2684
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 2676-2684
-
-
Van Den Broek, B.1
Noom, M.C.2
Wuite, G.J.L.3
-
30
-
-
13544277165
-
Initiation of translocation by Type I restriction-modification enzymes is associated with a short DNA extrusion
-
van Noort J, van der Heijden T, Dutta CF, Firman K, Dekker C (2004) Initiation of translocation by Type I restriction-modification enzymes is associated with a short DNA extrusion. Nucleic Acids Res 32: 6540-6547
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 6540-6547
-
-
Van Noort, J.1
Van Der Heijden, T.2
Dutta, C.F.3
Firman, K.4
Dekker, C.5
-
31
-
-
0018835269
-
DNA translocation by the restriction enzyme from Escherichia coli K
-
Yuan R, Hamilton DL, Burckhardt J (1980) DNA translocation by the restriction enzyme from Escherichia coli K. Cell 20: 237-244
-
(1980)
Cell
, vol.20
, pp. 237-244
-
-
Yuan, R.1
Hamilton, D.L.2
Burckhardt, J.3
|