-
1
-
-
0027936122
-
Deletions within the DNA recognition subunit of M. Eco R124I that identify a region involved in protein-protein interactions between HsdS and HsdM
-
Abadjieva A., Webb M., Patel J., Zinkevich V., Firman K. Deletions within the DNA recognition subunit of M. Eco R124I that identify a region involved in protein-protein interactions between HsdS and HsdM. J. Mol. Biol. 241:1993;35-43.
-
(1993)
J. Mol. Biol.
, vol.241
, pp. 35-43
-
-
Abadjieva, A.1
Webb, M.2
Patel, J.3
Zinkevich, V.4
Firman, K.5
-
2
-
-
0015929640
-
Studies of SV40 DNA. V. Conversion of circular to linear SV40 DNA by restriction endonuclease from Escherichia coli B
-
Adler S. P., Nathans D. Studies of SV40 DNA. V. Conversion of circular to linear SV40 DNA by restriction endonuclease from Escherichia coli B. Biochim. Biophys. Acta. 199:1973;177-188.
-
(1973)
Biochim. Biophys. Acta
, vol.199
, pp. 177-188
-
-
Adler, S.P.1
Nathans, D.2
-
4
-
-
0033105094
-
Conserved domains in DNA repair proteins and evolution of repair systems
-
Aravind L., Walker D. R., Koonin E. V. Conserved domains in DNA repair proteins and evolution of repair systems. Nucl. Acids Res. 27:1999;1223-1242.
-
(1999)
Nucl. Acids Res.
, vol.27
, pp. 1223-1242
-
-
Aravind, L.1
Walker, D.R.2
Koonin, E.V.3
-
5
-
-
0001952059
-
The ATP-dependent restriction endonucleases
-
S. M. Linn, R. S. Lloyd, & R. J. Roberts. Cold Spring Harbor: Cold Spring Harbor Laboratory Press
-
Bickle T. A. The ATP-dependent restriction endonucleases. Linn S. M., Lloyd R. S., Roberts R. J. Nucleases. 1993;89-109 Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
-
(1993)
Nucleases
, pp. 89-109
-
-
Bickle, T.A.1
-
7
-
-
0017889628
-
ATP-induced conformational changes in the restriction endonuclease from Escherichia coli K-12
-
Bickle T. A., Brack C., Yuan R. ATP-induced conformational changes in the restriction endonuclease from Escherichia coli K-12. Proc. Natl Acad. Sci. USA. 75:1978;3099-3103.
-
(1978)
Proc. Natl Acad. Sci. USA
, vol.75
, pp. 3099-3103
-
-
Bickle, T.A.1
Brack, C.2
Yuan, R.3
-
10
-
-
0019873778
-
Complexes formed between the restriction endonuclease Eco K and heteroduplex DNA
-
Burckhardt J., Weisemann J., Hamilton D. L., Yuan R. Complexes formed between the restriction endonuclease Eco K and heteroduplex DNA. J. Mol. Biol. 153:1981a;425-440.
-
(1981)
J. Mol. Biol.
, vol.153
, pp. 425-440
-
-
Burckhardt, J.1
Weisemann, J.2
Hamilton, D.L.3
Yuan, R.4
-
11
-
-
0019420233
-
Characterization of the DNA methylase activity of the restriction enzyme from Escherichia coli K
-
Burckhardt J., Weisemann J., Yuan R. Characterization of the DNA methylase activity of the restriction enzyme from Escherichia coli K. J. Biol. Chem. 256:1981b;4024-4032.
-
(1981)
J. Biol. Chem.
, vol.256
, pp. 4024-4032
-
-
Burckhardt, J.1
Weisemann, J.2
Yuan, R.3
-
12
-
-
0032510963
-
Crystal structure of RNA helicase from genotype 1b hepatitis C virus - A feasible mechanism of unwinding duplex RNA
-
Cho H. S., Ha N. C., Kang L. W., Chung K. M., Back S. H., Jang S. K., Oh B. H. Crystal structure of RNA helicase from genotype 1b hepatitis C virus - a feasible mechanism of unwinding duplex RNA. J. Biol. Chem. 273:1998;15045-15052.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 15045-15052
-
-
Cho, H.S.1
Ha, N.C.2
Kang, L.W.3
Chung, K.M.4
Back, S.H.5
Jang, S.K.6
Oh, B.H.7
-
13
-
-
0028327426
-
The domains of a type I DNA methyltransferase: Interactions and role in recognition of DNA methylation
-
Cooper L. P., Dryden D. T. F. The domains of a type I DNA methyltransferase: interactions and role in recognition of DNA methylation. J. Mol. Biol. 236:1994;1011-1021.
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 1011-1021
-
-
Cooper, L.P.1
Dryden, D.T.F.2
-
14
-
-
0032212129
-
Eco KI with an amino acid substitution in any one of seven DEAD-box motifs has impaired ATPase and endonuclease activities
-
Davies G. P., Powell L. M., Webb J. L., Cooper L. P., Murray N. E. Eco KI with an amino acid substitution in any one of seven DEAD-box motifs has impaired ATPase and endonuclease activities. Nucl. Acids Res. 26:1998;4828-4836.
-
(1998)
Nucl. Acids Res.
, vol.26
, pp. 4828-4836
-
-
Davies, G.P.1
Powell, L.M.2
Webb, J.L.3
Cooper, L.P.4
Murray, N.E.5
-
15
-
-
0030582726
-
DNA cleavage by the type IC restriction-modification enzyme Eco R124II
-
Dreier J., MacWilliams M. P., Bickle T. A. DNA cleavage by the type IC restriction-modification enzyme Eco R124II. J. Mol. Biol. 264:1996;722-733.
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 722-733
-
-
Dreier, J.1
MacWilliams, M.P.2
Bickle, T.A.3
-
16
-
-
0027497325
-
Purification and characterization of the methyltransferase from the type I restriction and modification system ofEscherichia coli K12
-
Dryden D. T. F., Cooper L. P., Murray N. E. Purification and characterization of the methyltransferase from the type I restriction and modification system ofEscherichia coli K12. J. Biol. Chem. 268:1993;13228-13236.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 13228-13236
-
-
Dryden, D.T.F.1
Cooper, L.P.2
Murray, N.E.3
-
18
-
-
0031049939
-
The in vitro assembly of the Eco KI type I DNA restriction/modification enzyme and its in vivo implications
-
Dryden D. T. F., Cooper L. P., Thorpe P. H., Byron O. The in vitro assembly of the Eco KI type I DNA restriction/modification enzyme and its in vivo implications. Biochemistry. 36:1997;1065-1076.
-
(1997)
Biochemistry
, vol.36
, pp. 1065-1076
-
-
Dryden, D.T.F.1
Cooper, L.P.2
Thorpe, P.H.3
Byron, O.4
-
19
-
-
0032932374
-
Direct observation of DNA translocation and cleavage by atomic force microscopy
-
Ellis D., Dryden D. T. F., Berge T., Edwardson J. M., Henderson R. M. Direct observation of DNA translocation and cleavage by atomic force microscopy. Nature Struct. Biol. 6:1999;15-17.
-
(1999)
Nature Struct. Biol.
, vol.6
, pp. 15-17
-
-
Ellis, D.1
Dryden, D.T.F.2
Berge, T.3
Edwardson, J.M.4
Henderson, R.M.5
-
20
-
-
0021861795
-
The DNA restriction endonuclease of Escherichia coli B. I. Studies of the DNA translocation and the ATPase activities
-
Endlich B., Linn S. The DNA restriction endonuclease of Escherichia coli B. I. Studies of the DNA translocation and the ATPase activities. J. Biol. Chem. 260:1985;5720-5728.
-
(1985)
J. Biol. Chem.
, vol.260
, pp. 5720-5728
-
-
Endlich, B.1
Linn, S.2
-
21
-
-
0015501748
-
The deoxyribonucleic acid modification and restriction enzymes of Escherichia coli B. II. Purification, subunit structure, and catalytic properties of the restriction endonuclease
-
Eskin B., Linn S. The deoxyribonucleic acid modification and restriction enzymes of Escherichia coli B. II. Purification, subunit structure, and catalytic properties of the restriction endonuclease. J. Biol. Chem. 247:1972a;6183-6191.
-
(1972)
J. Biol. Chem.
, vol.247
, pp. 6183-6191
-
-
Eskin, B.1
Linn, S.2
-
22
-
-
0015501781
-
The deoxyribonucleic acid modification and restriction enzymes of Escherichia coli B. III. Studies of the restriction adenosine triphosphatase
-
Eskin B., Linn S. The deoxyribonucleic acid modification and restriction enzymes of Escherichia coli B. III. Studies of the restriction adenosine triphosphatase. J. Biol. Chem. 247:1972b;6192-6196.
-
(1972)
J. Biol. Chem.
, vol.247
, pp. 6192-6196
-
-
Eskin, B.1
Linn, S.2
-
23
-
-
0023055086
-
Correlation between sites of limited proteolysis and segmental mobility in thermolysin
-
Fontana A., Fassina G., Vita C., Dalzoppo D., Zamai M., Zambonin M. Correlation between sites of limited proteolysis and segmental mobility in thermolysin. Biochemistry. 25:1986;1847-1851.
-
(1986)
Biochemistry
, vol.25
, pp. 1847-1851
-
-
Fontana, A.1
Fassina, G.2
Vita, C.3
Dalzoppo, D.4
Zamai, M.5
Zambonin, M.6
-
24
-
-
0029009441
-
Rate of translocation of bacteriophage T7 DNA across the membranes of Escherichia coli
-
Garcia L. R., Molineux I. J. Rate of translocation of bacteriophage T7 DNA across the membranes of Escherichia coli. J. Bacteriol. 177:1995;4066-4076.
-
(1995)
J. Bacteriol
, vol.177
, pp. 4066-4076
-
-
Garcia, L.R.1
Molineux, I.J.2
-
25
-
-
0025995309
-
Endonuclease (R) subunits of type-I and type-III restriction-modification enzymes contain a helicase-like domain
-
Gorbalenya A. E., Koonin E. V. Endonuclease (R) subunits of type-I and type-III restriction-modification enzymes contain a helicase-like domain. FEBS Letters. 291:1991;277-281.
-
(1991)
FEBS Letters
, vol.291
, pp. 277-281
-
-
Gorbalenya, A.E.1
Koonin, E.V.2
-
26
-
-
0025295967
-
Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants
-
Grant S. G. N., Jessee J., Bloom F. R., Hanahan D. Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants. Proc. Natl Acad. Sci. USA. 87:1990;4645-4649.
-
(1990)
Proc. Natl Acad. Sci. USA
, vol.87
, pp. 4645-4649
-
-
Grant, S.G.N.1
Jessee, J.2
Bloom, F.R.3
Hanahan, D.4
-
27
-
-
0015420602
-
Cleavage of bacteriophage f1 DNA by the restriction enzyme of Escherichia coli
-
Horiuchi K., Zinder N. Cleavage of bacteriophage f1 DNA by the restriction enzyme of Escherichia coli. Proc. Natl Acad. Sci. USA. 69:1972;3220-3224.
-
(1972)
Proc. Natl Acad. Sci. USA
, vol.69
, pp. 3220-3224
-
-
Horiuchi, K.1
Zinder, N.2
-
28
-
-
0031686571
-
The premature ageing syndrome protein, WRN, is a 3′→5′ exonuclease
-
Huang S., Li B., Gray M. D., Oshima J., Mian I. S., Capisis J. The premature ageing syndrome protein, WRN, is a 3′→5′ exonuclease. Nature Genet. 20:1998;114-115.
-
(1998)
Nature Genet.
, vol.20
, pp. 114-115
-
-
Huang, S.1
Li, B.2
Gray, M.D.3
Oshima, J.4
Mian, I.S.5
Capisis, J.6
-
29
-
-
0032190284
-
DNA binding studies with the type IC restriction endonuclease Eco R124I indicate a variable subunit stoichiometry
-
Janscak P., Dryden D. T. F., Firman K. DNA binding studies with the type IC restriction endonuclease Eco R124I indicate a variable subunit stoichiometry. Nucl. Acids Res. 26:1998;4439-4445.
-
(1998)
Nucl. Acids Res.
, vol.26
, pp. 4439-4445
-
-
Janscak, P.1
Dryden, D.T.F.2
Firman, K.3
-
30
-
-
0018407592
-
The nucleotide sequence recognized by the Escherichia coli K12 restriction and modification enzymes
-
Kan N. C., Lautenberger J. A., Edgell M. H., Hutchison C. A. III. The nucleotide sequence recognized by the Escherichia coli K12 restriction and modification enzymes. J. Mol. Biol. 130:1979;191-209.
-
(1979)
J. Mol. Biol.
, vol.130
, pp. 191-209
-
-
Kan, N.C.1
Lautenberger, J.A.2
Edgell, M.H.3
Hutchison C.A. III4
-
31
-
-
0025886886
-
Mutations that confer de novo activity upon a maintenance methyltransferase
-
Kelleher J. E., Daniel A. S., Murray N. E. Mutations that confer de novo activity upon a maintenance methyltransferase. J. Mol. Biol. 221:1991;431-440.
-
(1991)
J. Mol. Biol.
, vol.221
, pp. 431-440
-
-
Kelleher, J.E.1
Daniel, A.S.2
Murray, N.E.3
-
32
-
-
0032518490
-
Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: The crystal structure provides insights into the mode of unwinding
-
Kim J. L., Morgenstern K. A., Griffith J. P., Dwyer M. D., Thomson J. A., Murcko M. A., Lin C., Caron P. R. Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwinding. Structure. 6:1998;89-100.
-
(1998)
Structure
, vol.6
, pp. 89-100
-
-
Kim, J.L.1
Morgenstern, K.A.2
Griffith, J.P.3
Dwyer, M.D.4
Thomson, J.A.5
Murcko, M.A.6
Lin, C.7
Caron, P.R.8
-
33
-
-
0027971210
-
Restriction enzymes in cells, not eppendorfs
-
King G., Murray N. E. Restriction enzymes in cells, not eppendorfs. Trends Microbiol. 2:1994;465-469.
-
(1994)
Trends Microbiol.
, vol.2
, pp. 465-469
-
-
King, G.1
Murray, N.E.2
-
34
-
-
0028099459
-
A symmetrical model for the domain structure of Type I DNA methyltransferases
-
Kneale G. G. A symmetrical model for the domain structure of Type I DNA methyltransferases. J. Mol. Biol. 243:1994;1-5.
-
(1994)
J. Mol. Biol.
, vol.243
, pp. 1-5
-
-
Kneale, G.G.1
-
35
-
-
0032546734
-
Analyzing the functional organisation of a novel restriction modification system, the Bcg I system
-
Kong H. Analyzing the functional organisation of a novel restriction modification system, the Bcg I system. J. Mol. Biol. 279:1998;823-832.
-
(1998)
J. Mol. Biol.
, vol.279
, pp. 823-832
-
-
Kong, H.1
-
36
-
-
0030740262
-
Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP
-
Korolev S., Hsieh J., Gauss G. H., Lohman T. M., Waksman G. Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP. Cell. 90:1997;635-647.
-
(1997)
Cell
, vol.90
, pp. 635-647
-
-
Korolev, S.1
Hsieh, J.2
Gauss, G.H.3
Lohman, T.M.4
Waksman, G.5
-
37
-
-
0029893874
-
Mechanisms of helicase-catalyzed DNA unwinding
-
Lohman T. M., Bjornson K. P. Mechanisms of helicase-catalyzed DNA unwinding. Annu. Rev. Biochem. 65:1996;169-214.
-
(1996)
Annu. Rev. Biochem.
, vol.65
, pp. 169-214
-
-
Lohman, T.M.1
Bjornson, K.P.2
-
38
-
-
0029790428
-
Generation of new DNA binding specificity by truncation of the type IC Eco DXXI hsdS gene
-
MacWilliams M. P., Bickle T. A. Generation of new DNA binding specificity by truncation of the type IC Eco DXXI hsdS gene. EMBO J. 15:1996;4775-4783.
-
(1996)
EMBO J.
, vol.15
, pp. 4775-4783
-
-
MacWilliams, M.P.1
Bickle, T.A.2
-
39
-
-
0029045067
-
Type III restriction endonucleases translocate DNA in a reaction driven by recognition site-specific ATP hydrolysis
-
Meisel A., Mackeldanz P., Bickle T. A., Kruger D. H., Schroeder C. Type III restriction endonucleases translocate DNA in a reaction driven by recognition site-specific ATP hydrolysis. EMBO J. 14:1995;2958-2966.
-
(1995)
EMBO J.
, vol.14
, pp. 2958-2966
-
-
Meisel, A.1
Mackeldanz, P.2
Bickle, T.A.3
Kruger, D.H.4
Schroeder, C.5
-
40
-
-
0027501321
-
Macroevolution by transposition - drastic modification of DNA recognition by a type-I restriction enzyme following Tn5 transposition
-
Meister J., MacWilliams M., Hubner P., Jutte H., Skrzypek E., Piekarowicz A., Bickle T. A. Macroevolution by transposition - drastic modification of DNA recognition by a type-I restriction enzyme following Tn5 transposition. EMBO J. 12:1993;4585-4591.
-
(1993)
EMBO J.
, vol.12
, pp. 4585-4591
-
-
Meister, J.1
MacWilliams, M.2
Hubner, P.3
Jutte, H.4
Skrzypek, E.5
Piekarowicz, A.6
Bickle, T.A.7
-
41
-
-
0030457882
-
High resolution footprinting of a type I methyltransferase reveals a large structural distortion within the DNA recognition site
-
Mernagh D. R., Kneale G. G. High resolution footprinting of a type I methyltransferase reveals a large structural distortion within the DNA recognition site. Nucl. Acids Res. 24:1996;4853-4858.
-
(1996)
Nucl. Acids Res.
, vol.24
, pp. 4853-4858
-
-
Mernagh, D.R.1
Kneale, G.G.2
-
42
-
-
0031969570
-
Protein-protein and protein-DNA interactions in the type I restriction endonuclease R. Eco R124I
-
Mernagh D. R., Janscak P., Firman K., Kneale G. G. Protein-protein and protein-DNA interactions in the type I restriction endonuclease R. Eco R124I. Biol. Chem. 379:1998a;497-503.
-
(1998)
Biol. Chem.
, vol.379
, pp. 497-503
-
-
Mernagh, D.R.1
Janscak, P.2
Firman, K.3
Kneale, G.G.4
-
43
-
-
0032535247
-
Interaction of the type I methyltransferase M. Eco R124I with modified DNA substrates: Sequence discrimination and base flipping
-
Mernagh D. R., Taylor I. A., Kneale G. G. Interaction of the type I methyltransferase M. Eco R124I with modified DNA substrates: sequence discrimination and base flipping. Biochem. J. 336:1998b;719-725.
-
(1998)
Biochem. J.
, vol.336
, pp. 719-725
-
-
Mernagh, D.R.1
Taylor, I.A.2
Kneale, G.G.3
-
44
-
-
0014427164
-
DNA restriction enzyme from E. coli
-
Meselson M., Yuan R. DNA restriction enzyme from E. coli. Nature. 217:1968;1110-1114.
-
(1968)
Nature
, vol.217
, pp. 1110-1114
-
-
Meselson, M.1
Yuan, R.2
-
45
-
-
0018601460
-
Structures and mechanisms of DNA restriction and modification enzymes
-
Modrich P. Structures and mechanisms of DNA restriction and modification enzymes. Quart. Rev. Biophys. 12:1979;315-369.
-
(1979)
Quart. Rev. Biophys.
, vol.12
, pp. 315-369
-
-
Modrich, P.1
-
46
-
-
0015760410
-
Restriction of bacteriophage lambda by Escherichia coli K
-
Murray N. E., Batten P. L., Murray K. Restriction of bacteriophage lambda by Escherichia coli K. J. Mol. Biol. 81:1973;395-407.
-
(1973)
J. Mol. Biol.
, vol.81
, pp. 395-407
-
-
Murray, N.E.1
Batten, P.L.2
Murray, K.3
-
47
-
-
0027239508
-
Conservation of motifs within the unusually variable polypeptide sequences of type I restriction and modification enzymes
-
Murray N. E., Daniel A. S., Cowan G. M., Sharp P. M. Conservation of motifs within the unusually variable polypeptide sequences of type I restriction and modification enzymes. Mol. Microbiol. 9:1993;133-143.
-
(1993)
Mol. Microbiol.
, vol.9
, pp. 133-143
-
-
Murray, N.E.1
Daniel, A.S.2
Cowan, G.M.3
Sharp, P.M.4
-
48
-
-
0030930660
-
Domain structure of thermus thermophilus UvrB protein: Similarity in domain structure to a helicase
-
Nakagawa N., Masuir R., Kato R., Kuramitsu S. Domain structure of thermus thermophilus UvrB protein: similarity in domain structure to a helicase. J. Biol. Chem. 272:1997;22703-22713.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 22703-22713
-
-
Nakagawa, N.1
Masuir, R.2
Kato, R.3
Kuramitsu, S.4
-
49
-
-
0032530311
-
Crystal structure of restriction endonuclease Bgl I bound to its interrupted DNA recognition sequence
-
Newman M., Lunnen K., Wilson G., Greci J., Schildkraut I., Phillips S. E. V. Crystal structure of restriction endonuclease Bgl I bound to its interrupted DNA recognition sequence. EMBO J. 17:1998;5466-5476.
-
(1998)
EMBO J.
, vol.17
, pp. 5466-5476
-
-
Newman, M.1
Lunnen, K.2
Wilson, G.3
Greci, J.4
Schildkraut, I.5
Phillips, S.E.V.6
-
50
-
-
0032403154
-
Localisation of a protein-DNA interface by random mutagenesis
-
O'Neill M., Dryden D. T. F., Murray N. E. Localisation of a protein-DNA interface by random mutagenesis. EMBO J. 17:1998;7118-7127.
-
(1998)
EMBO J.
, vol.17
, pp. 7118-7127
-
-
O'Neill, M.1
Dryden, D.T.F.2
Murray, N.E.3
-
51
-
-
0030977227
-
The RecB protein of Escherichia coli translocates along single-stranded DNA in the 3′ to 5′ direction: A proposed ratchet mechanism
-
Phillips R. J., Hickelton D. C., Boehmer P. E., Emmerson P. T. The RecB protein of Escherichia coli translocates along single-stranded DNA in the 3′ to 5′ direction: a proposed ratchet mechanism. Mol. Gen. Genet. 254:1997;319-329.
-
(1997)
Mol. Gen. Genet.
, vol.254
, pp. 319-329
-
-
Phillips, R.J.1
Hickelton, D.C.2
Boehmer, P.E.3
Emmerson, P.T.4
-
52
-
-
0030911133
-
Recognition and cleavage of DNA by type-II restriction endonucleases
-
Pingoud A., Jeltsch A. Recognition and cleavage of DNA by type-II restriction endonucleases. Eur. J. Biochem. 246:1997;1-22.
-
(1997)
Eur. J. Biochem.
, vol.246
, pp. 1-22
-
-
Pingoud, A.1
Jeltsch, A.2
-
53
-
-
0028955417
-
S-Adenosyl methionine alters the DNA contacts of the Eco KI methyltransferase
-
Powell L. M., Murray N. E. S-Adenosyl methionine alters the DNA contacts of the Eco KI methyltransferase. Nucl. Acids Res. 23:1995;967-974.
-
(1995)
Nucl. Acids Res.
, vol.23
, pp. 967-974
-
-
Powell, L.M.1
Murray, N.E.2
-
54
-
-
0027453423
-
DNA recognition by the Eco K methyltransferase - The influence of DNA methylation and the cofactor S-adenosyl-L -methionine
-
Powell L. M., Dryden D. T. F., Willcock D. F., Pain R. H., Murray N. E. DNA recognition by the Eco K methyltransferase - the influence of DNA methylation and the cofactor S-adenosyl-L -methionine. J. Mol. Biol. 234:1993;60-71.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 60-71
-
-
Powell, L.M.1
Dryden, D.T.F.2
Willcock, D.F.3
Pain, R.H.4
Murray, N.E.5
-
55
-
-
0032514950
-
The DNA binding characteristics of the timeric Eco KI methyltransferase and its partially assembled dimeric form determined by fluorescence polarisation and DNA footprinting
-
Powell L. M., Connolly B. A., Dryden D. T. F. The DNA binding characteristics of the timeric Eco KI methyltransferase and its partially assembled dimeric form determined by fluorescence polarisation and DNA footprinting. J. Mol. Biol. 283:1998a;947-961.
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 947-961
-
-
Powell, L.M.1
Connolly, B.A.2
Dryden, D.T.F.3
-
56
-
-
0032515196
-
Sequence-specific DNA binding by Eco KI, a type IA DNA restriction enzyme
-
Powell L. M., Dryden D. T. F., Murray N. E. Sequence-specific DNA binding by Eco KI, a type IA DNA restriction enzyme. J. Mol. Biol. 283:1998b;963-976.
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 963-976
-
-
Powell, L.M.1
Dryden, D.T.F.2
Murray, N.E.3
-
58
-
-
0002598414
-
Type II restriction endonucleases
-
S. M. Linn, R. S. Lloyd, & R. J. Roberts. Cold Spring Harbor: Cold Spring Harbor Laboratory Press
-
Roberts R. J., Halford S. E. Type II restriction endonucleases. Linn S. M., Lloyd R. S., Roberts R. J. Nucleases. 1993;Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
-
(1993)
Nucleases
-
-
Roberts, R.J.1
Halford, S.E.2
-
59
-
-
0018362393
-
Electron microscopic studies of the mechanism of action of the restriction endonuclease of Escherichia coli B
-
Rosamond J., Endlich B., Linn S. Electron microscopic studies of the mechanism of action of the restriction endonuclease of Escherichia coli B. J. Mol. Biol. 129:1979;619-635.
-
(1979)
J. Mol. Biol.
, vol.129
, pp. 619-635
-
-
Rosamond, J.1
Endlich, B.2
Linn, S.3
-
60
-
-
0028158628
-
PHD - an automatic mail server for protein secondary structure prediction
-
Rost B., Sander C., Schneider R. PHD - an automatic mail server for protein secondary structure prediction. Comp. Appl. Biosci. 10:1994;53-60.
-
(1994)
Comp. Appl. Biosci.
, vol.10
, pp. 53-60
-
-
Rost, B.1
Sander, C.2
Schneider, R.3
-
61
-
-
0026696177
-
A site-directed mutagenesis study to identify amino acid residues involved in the catalytic function of the restriction endonuclease Eco RV
-
Selent U., Ruter T., Kohler E., Liedtke M., Thielking V., Alves J., Oelgeschlager T., Wolfes H., Peters F., Pingoud A. A site-directed mutagenesis study to identify amino acid residues involved in the catalytic function of the restriction endonuclease Eco RV. Biochemistry. 31:1992;4808-4815.
-
(1992)
Biochemistry
, vol.31
, pp. 4808-4815
-
-
Selent, U.1
Ruter, T.2
Kohler, E.3
Liedtke, M.4
Thielking, V.5
Alves, J.6
Oelgeschlager, T.7
Wolfes, H.8
Peters, F.9
Pingoud, A.10
-
62
-
-
0032545515
-
Werner syndrome protein: DNA helicase and DNA exonuclease reside on the same polypeptide
-
Shen J.-C., Gray M. D., Oshima J., Kamath-Loeb A. S., Fry M., Loeb L. A. Werner syndrome protein: DNA helicase and DNA exonuclease reside on the same polypeptide. J. Biol. Chem. 273:1998;34139-34144.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 34139-34144
-
-
Shen, J.-C.1
Gray, M.D.2
Oshima, J.3
Kamath-Loeb, A.S.4
Fry, M.5
Loeb, L.A.6
-
63
-
-
0016350386
-
Model for wandering restriction enzyme
-
Shulman M. J. Model for wandering restriction enzyme. Nature. 252:1974;76-78.
-
(1974)
Nature
, vol.252
, pp. 76-78
-
-
Shulman, M.J.1
-
64
-
-
0023732866
-
Model for how type I restriction enzymes select cleavage sites in DNA
-
Studier F. W., Bandyopadhyay P. K. Model for how type I restriction enzymes select cleavage sites in DNA. Proc. Natl Acad. Sci. USA. 85:1988;4677-4681.
-
(1988)
Proc. Natl Acad. Sci. USA
, vol.85
, pp. 4677-4681
-
-
Studier, F.W.1
Bandyopadhyay, P.K.2
-
65
-
-
0030851906
-
A prediction of the amino acids and structures involved in DNA recognition by type I DNA restriction and modification enzymes
-
Sturrock S. S., Dryden D. T. F. A prediction of the amino acids and structures involved in DNA recognition by type I DNA restriction and modification enzymes. Nucl. Acids Res. 25:1997;3408-3414.
-
(1997)
Nucl. Acids Res.
, vol.25
, pp. 3408-3414
-
-
Sturrock, S.S.1
Dryden, D.T.F.2
-
67
-
-
0022357258
-
Eco A: The first member of a new family of type I restriction modification systems. Gene organisation and enzymatic activities
-
Suri B., Bickle T. A. Eco A: the first member of a new family of type I restriction modification systems. Gene organisation and enzymatic activities. J. Mol. Biol. 186:1985;77-85.
-
(1985)
J. Mol. Biol.
, vol.186
, pp. 77-85
-
-
Suri, B.1
Bickle, T.A.2
-
68
-
-
0029910629
-
Repercussions of DNA tracking by the type IC restriction endonuclease Eco R124I on linear, circular and catenated substrates
-
Szczelkun M. D., Dillingham M. S., Janscak P., Firman K., Halford S. E. Repercussions of DNA tracking by the type IC restriction endonuclease Eco R124I on linear, circular and catenated substrates. EMBO J. 15:1996;6335-6347.
-
(1996)
EMBO J.
, vol.15
, pp. 6335-6347
-
-
Szczelkun, M.D.1
Dillingham, M.S.2
Janscak, P.3
Firman, K.4
Halford, S.E.5
-
69
-
-
0031559573
-
Selection of non-specific DNA cleavage sites by the type IC restriction endonuclease Eco R124I
-
Szczelkun M. D., Janscak P., Firman K., Halford S. E. Selection of non-specific DNA cleavage sites by the type IC restriction endonuclease Eco R124I. J. Mol. Biol. 271:1997;112-123.
-
(1997)
J. Mol. Biol.
, vol.271
, pp. 112-123
-
-
Szczelkun, M.D.1
Janscak, P.2
Firman, K.3
Halford, S.E.4
-
70
-
-
0027427533
-
Substrate recognition and selectivity in the type IC DNA modification methylase M. Eco R124I
-
Taylor I., Watts D., Kneale G. Substrate recognition and selectivity in the type IC DNA modification methylase M. Eco R124I. Nucl. Acids Res. 21:1993;4929-4935.
-
(1993)
Nucl. Acids Res.
, vol.21
, pp. 4929-4935
-
-
Taylor, I.1
Watts, D.2
Kneale, G.3
-
71
-
-
0028029820
-
DNA binding induces a major structural transition in a type I methyltransferase
-
Taylor I. A., Davis K. G., Watts D., Kneale G. G. DNA binding induces a major structural transition in a type I methyltransferase. EMBO J. 13:1994;5772-5778.
-
(1994)
EMBO J.
, vol.13
, pp. 5772-5778
-
-
Taylor, I.A.1
Davis, K.G.2
Watts, D.3
Kneale, G.G.4
-
72
-
-
0030612718
-
The specificity of Sty SKI, a type I restriction enzyme, implies a structure with rotational symmetry
-
Thorpe P. H., Ternent D., Murray N. E. The specificity of Sty SKI, a type I restriction enzyme, implies a structure with rotational symmetry. Nucl. Acids Res. 25:1997;1694-1700.
-
(1997)
Nucl. Acids Res.
, vol.25
, pp. 1694-1700
-
-
Thorpe, P.H.1
Ternent, D.2
Murray, N.E.3
-
73
-
-
0029845665
-
A third family of allelic hsd genes in Salmonella enterica -sequence comparisons with related proteins identify conserved regions implicated in restriction of DNA
-
Titheradge A. J. B., Ternent D., Murray N. E. A third family of allelic hsd genes in Salmonella enterica -sequence comparisons with related proteins identify conserved regions implicated in restriction of DNA. Mol. Microbiol. 22:1996;437-447.
-
(1996)
Mol. Microbiol.
, vol.22
, pp. 437-447
-
-
Titheradge, A.J.B.1
Ternent, D.2
Murray, N.E.3
-
74
-
-
0033515425
-
Crystal structure of complexes of PcrA DNA helicase with DNA substrate indicate an inchworm mechanism
-
Velankar S. S., Soultanas P., Dillingham M. S., Subramanya H. S., Wigley D. B. Crystal structure of complexes of PcrA DNA helicase with DNA substrate indicate an inchworm mechanism. Cell. 97:1999;75-84.
-
(1999)
Cell
, vol.97
, pp. 75-84
-
-
Velankar, S.S.1
Soultanas, P.2
Dillingham, M.S.3
Subramanya, H.S.4
Wigley, D.B.5
-
75
-
-
0030032124
-
Random mutagenesis targeted to the active site of the Eco RV restriction endonuclease
-
Vipond I. B., Halford S. E. Random mutagenesis targeted to the active site of the Eco RV restriction endonuclease. Biochemistry. 35:1996;1701-1711.
-
(1996)
Biochemistry
, vol.35
, pp. 1701-1711
-
-
Vipond, I.B.1
Halford, S.E.2
-
76
-
-
0030790696
-
Structure of the multimodular endonuclease Fok I bound to DNA
-
Wah D. A., Hirsch J. A., Dorner L. F., Schilddkraut I., Aggarwal A. K. Structure of the multimodular endonuclease Fok I bound to DNA. Nature. 388:1997;97-100.
-
(1997)
Nature
, vol.388
, pp. 97-100
-
-
Wah, D.A.1
Hirsch, J.A.2
Dorner, L.F.3
Schilddkraut, I.4
Aggarwal, A.K.5
-
78
-
-
0029965714
-
Restriction by Eco KI is enhanced by cooperative interactions between target sequences and is dependent on DEAD box motifs
-
Webb J. L., King G., Ternent D., Titheradge A. J. B., Murray N. E. Restriction by Eco KI is enhanced by cooperative interactions between target sequences and is dependent on DEAD box motifs. EMBO J. 15:1996;2003-2009.
-
(1996)
EMBO J.
, vol.15
, pp. 2003-2009
-
-
Webb, J.L.1
King, G.2
Ternent, D.3
Titheradge, A.J.B.4
Murray, N.E.5
-
79
-
-
0029011014
-
Probing the domain structure of the type IC DNA methyltransferase M. Eco R124I by limited proteolysis
-
Webb M., Taylor I. A., Firman K., Kneale G. G. Probing the domain structure of the type IC DNA methyltransferase M. Eco R124I by limited proteolysis. J. Mol. Biol. 250:1995;181-190.
-
(1995)
J. Mol. Biol.
, vol.250
, pp. 181-190
-
-
Webb, M.1
Taylor, I.A.2
Firman, K.3
Kneale, G.G.4
-
80
-
-
0028074254
-
A mutational analysis of the two motifs common to adenine methyltransferases
-
Willcock D. F., Dryden D. T. F., Murray N. E. A mutational analysis of the two motifs common to adenine methyltransferases. EMBO J. 13:1994;3902-3908.
-
(1994)
EMBO J.
, vol.13
, pp. 3902-3908
-
-
Willcock, D.F.1
Dryden, D.T.F.2
Murray, N.E.3
-
81
-
-
0030979410
-
Structure of the hepatitis C virus RNA helicase domain
-
Yao N. H., Hesson T., Cable M., Hong Z., Kwong A. D., Le H. V., Weber P. C. Structure of the hepatitis C virus RNA helicase domain. Nature Struct. Biol. 4:1997;463-467.
-
(1997)
Nature Struct. Biol.
, vol.4
, pp. 463-467
-
-
Yao, N.H.1
Hesson, T.2
Cable, M.3
Hong, Z.4
Kwong, A.D.5
Le, H.V.6
Weber, P.C.7
-
82
-
-
0032477911
-
The 30 kDa C-terminal domain of the RecB protein is critical for the nuclease activity, but not the helicase activity, of the RecBCD enzyme from Escherichia coli
-
Yu M., Souaya J., Julin D. A. The 30 kDa C-terminal domain of the RecB protein is critical for the nuclease activity, but not the helicase activity, of the RecBCD enzyme from Escherichia coli. Proc. Natl Acad. Sci. USA. 95:1998a;981-986.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 981-986
-
-
Yu, M.1
Souaya, J.2
Julin, D.A.3
-
83
-
-
0032491378
-
Identification of the nuclease active site in the multifunctional RecBCD enzyme by creation of a chimeric enzyme
-
Yu M., Souaya J., Julin D. A. Identification of the nuclease active site in the multifunctional RecBCD enzyme by creation of a chimeric enzyme. J. Mol. Biol. 283:1998b;797-808.
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 797-808
-
-
Yu, M.1
Souaya, J.2
Julin, D.A.3
-
84
-
-
0019376491
-
Structure and mechanism of multifunctional restriction endonucleases
-
Yuan R. Structure and mechanism of multifunctional restriction endonucleases. Annu. Rev. Biochem. 50:1981;285-315.
-
(1981)
Annu. Rev. Biochem.
, vol.50
, pp. 285-315
-
-
Yuan, R.1
-
85
-
-
0015498534
-
ATP hydrolysis by restriction endonuclease from E. coli K
-
Yuan R., Heywood J., Meselson M. ATP hydrolysis by restriction endonuclease from E. coli K. Nature New Biol. 240:1972;42-43.
-
(1972)
Nature New Biol.
, vol.240
, pp. 42-43
-
-
Yuan, R.1
Heywood, J.2
Meselson, M.3
-
86
-
-
0018835269
-
DNA translocation by the restriction enzyme from E. coli K
-
Yuan R., Hamilton D. L., Burckhardt J. DNA translocation by the restriction enzyme from E. coli K. Cell. 20:1980;237-244.
-
(1980)
Cell
, vol.20
, pp. 237-244
-
-
Yuan, R.1
Hamilton, D.L.2
Burckhardt, J.3
|