-
1
-
-
0034981387
-
The effect that genotyping errors have on the robustness of common linkage-disequilibrium measures
-
Akey JM, Zhang K, Xiong M, Doris P, Jin L. 2001. The effect that genotyping errors have on the robustness of common linkage-disequilibrium measures. Am J Hum Genet 68:1447-1456.
-
(2001)
Am J Hum Genet
, vol.68
, pp. 1447-1456
-
-
Akey, J.M.1
Zhang, K.2
Xiong, M.3
Doris, P.4
Jin, L.5
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
3242708463
-
Genome-wide detection and analysis of recent segmental duplications within mammalian organisms
-
Bailey JA, Eichler EE. 2003. Genome-wide detection and analysis of recent segmental duplications within mammalian organisms. Cold Spring Harbor Symp Quant Biol 68:115-124.
-
(2003)
Cold Spring Harbor Symp Quant Biol
, vol.68
, pp. 115-124
-
-
Bailey, J.A.1
Eichler, E.E.2
-
4
-
-
84968340260
-
Misclassification in 2 × 2 tables
-
Boss I. 1954. Misclassification in 2 × 2 tables. Biometrics 10:478.
-
(1954)
Biometrics
, vol.10
, pp. 478
-
-
Boss, I.1
-
5
-
-
0027514896
-
Molecular and statistical approaches to the detection and correction of errors in genotype databases
-
Brzustowicz LM, Mérette C, Xie X, Townsend L, Gilliam TC, Ott J. 1993. Molecular and statistical approaches to the detection and correction of errors in genotype databases. Am J Hum Genet 53:1137-1145.
-
(1993)
Am J Hum Genet
, vol.53
, pp. 1137-1145
-
-
Brzustowicz, L.M.1
Mérette, C.2
Xie, X.3
Townsend, L.4
Gilliam, T.C.5
Ott, J.6
-
6
-
-
0037837485
-
Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence
-
Cheung J, Estivill X, Khaja R, MacDonald JR, Lau K, Tsui LC, Scherer SW. 2003. Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence. Genome Biol 4:25.
-
(2003)
Genome Biol
, vol.4
, pp. 25
-
-
Cheung, J.1
Estivill, X.2
Khaja, R.3
MacDonald, J.R.4
Lau, K.5
Tsui, L.C.6
Scherer, S.W.7
-
7
-
-
0014082426
-
Group inbreeding and coancestry
-
Cockerham CC. 1967. Group inbreeding and coancestry. Genetics 56:789-792.
-
(1967)
Genetics
, vol.56
, pp. 789-792
-
-
Cockerham, C.C.1
-
8
-
-
0002260099
-
Variance of gene frequencies
-
Cockerham CC. 1969. Variance of gene frequencies. Evolution 23:72-78.
-
(1969)
Evolution
, vol.23
, pp. 72-78
-
-
Cockerham, C.C.1
-
10
-
-
0035109379
-
Population admixture: Detection by Hardy-Weinberg test and its quantitative effects on linkage-disequilibrium methods for localizing genes underlying complex traits
-
Deng HW, Chen WM, Recker RR. 2001. Population admixture: detection by Hardy-Weinberg test and its quantitative effects on linkage-disequilibrium methods for localizing genes underlying complex traits. Genetics 157:885-897.
-
(2001)
Genetics
, vol.157
, pp. 885-897
-
-
Deng, H.W.1
Chen, W.M.2
Recker, R.R.3
-
11
-
-
17644397384
-
Exon array CGH: Detection of copy-number changes at the resolution of individual exons in the human genome
-
Dhami P, Coffey AJ, Abbs S, Vermeesch JR, Dumanski JP, Woodward KJ, Andrews RM, Langford C, Vetrie D. 2005. Exon array CGH: detection of copy-number changes at the resolution of individual exons in the human genome. Am J Hum Genet 76:750-762.
-
(2005)
Am J Hum Genet
, vol.76
, pp. 750-762
-
-
Dhami, P.1
Coffey, A.J.2
Abbs, S.3
Vermeesch, J.R.4
Dumanski, J.P.5
Woodward, K.J.6
Andrews, R.M.7
Langford, C.8
Vetrie, D.9
-
12
-
-
0033941023
-
A multipoint method for detecting genotyping errors and mutations in sibling-pair linkage data
-
Douglas JA, Boehnke M, Lange K. 2000. A multipoint method for detecting genotyping errors and mutations in sibling-pair linkage data. Am J Hum Genet 66:1287-1297.
-
(2000)
Am J Hum Genet
, vol.66
, pp. 1287-1297
-
-
Douglas, J.A.1
Boehnke, M.2
Lange, K.3
-
13
-
-
0036154960
-
Probability of detection of genotyping errors and mutations as inheritance inconsistencies in nuclear-family data
-
Douglas JA, Skol AD, Boehnke M. 2002. Probability of detection of genotyping errors and mutations as inheritance inconsistencies in nuclear-family data. Am J Hum Genet 70:487-495.
-
(2002)
Am J Hum Genet
, vol.70
, pp. 487-495
-
-
Douglas, J.A.1
Skol, A.D.2
Boehnke, M.3
-
14
-
-
0029655834
-
Error detection for genetic data, using likelihood methods
-
Ehm MG, Kimmel M, Cottingham RW Jr. 1996. Error detection for genetic data, using likelihood methods, Am J Hum Genet 58:225-234.
-
(1996)
Am J Hum Genet
, vol.58
, pp. 225-234
-
-
Ehm, M.G.1
Kimmel, M.2
Cottingham Jr., R.W.3
-
15
-
-
0037101840
-
Chromosomal regions containing high-density and ambiguously mapped putative single nucleotide polymorphisms (SNPs) correlate with segmental duplications in the human genome
-
Estivill X, Cheung J, Pujana MA, Nakabayashi K, Scherer SW, Tsui LC. 2002. Chromosomal regions containing high-density and ambiguously mapped putative single nucleotide polymorphisms (SNPs) correlate with segmental duplications in the human genome. Hum Mol Genet 11:1987-1995.
-
(2002)
Hum Mol Genet
, vol.11
, pp. 1987-1995
-
-
Estivill, X.1
Cheung, J.2
Pujana, M.A.3
Nakabayashi, K.4
Scherer, S.W.5
Tsui, L.C.6
-
16
-
-
9344224529
-
A novel MHC class I-like gene is mutated in patients with hereditary haemochromatosis
-
Feder JN, Gnirke A, Thomas W, Tsuchihashi Z, Ruddy DA, Basava A, Dormishian F, Domingo R Jr, Ellis MC, Fullan A, Hinton LM, Jones NL, Kimmel BE, Kronmal GS, Laver P, Lee UK, Loeb DB, Mapa FA, McClelland E, Meyer NC, Mintier GA, Moeller N, Moore T, Morikang E, Prass CE, Quintana L, Stames SN, Schatzman RC, Brunke KJ, Drayna DT, Risch NJ, Bacon BR, Wolff KK. 1996. A novel MHC class I-like gene is mutated in patients with hereditary haemochromatosis. Nat Genet 13:399-408.
-
(1996)
Nat Genet
, vol.13
, pp. 399-408
-
-
Feder, J.N.1
Gnirke, A.2
Thomas, W.3
Tsuchihashi, Z.4
Ruddy, D.A.5
Basava, A.6
Dormishian, F.7
Domingo Jr., R.8
Ellis, M.C.9
Fullan, A.10
Hinton, L.M.11
Jones, N.L.12
Kimmel, B.E.13
Kronmal, G.S.14
Laver, P.15
Lee, U.K.16
Loeb, D.B.17
Mapa, F.A.18
McClelland, E.19
Meyer, N.C.20
Mintier, G.A.21
Moeller, N.22
Moore, T.23
Morikang, E.24
Prass, C.E.25
Quintana, L.26
Stames, S.N.27
Schatzman, R.C.28
Brunke, K.J.29
Drayna, D.T.30
Risch, N.J.31
Bacon, B.R.32
Wolff, K.K.33
more..
-
17
-
-
0036920317
-
Detection rates for genotyping errors in SNPs using the trio design
-
Geller F, Ziegler A. 2002. Detection rates for genotyping errors in SNPs using the trio design. Hum Hered 54:111-117.
-
(2002)
Hum Hered
, vol.54
, pp. 111-117
-
-
Geller, F.1
Ziegler, A.2
-
18
-
-
0035235036
-
Assessment and management of single nucleotide polymorphism genotype errors in genetic association analysis
-
Gordon D, Ott J. 2001. Assessment and management of single nucleotide polymorphism genotype errors in genetic association analysis. Pac Symp Biocomput 18-29.
-
(2001)
Pac Symp Biocomput
, pp. 18-29
-
-
Gordon, D.1
Ott, J.2
-
19
-
-
0032992242
-
True pedigree errors more frequent than apparent errors for single nucleotide polymorphisms
-
Gordon D, Heath SC, Ott J. 1999a. True pedigree errors more frequent than apparent errors for single nucleotide polymorphisms. Hum Hered 49:65-70.
-
(1999)
Hum Hered
, vol.49
, pp. 65-70
-
-
Gordon, D.1
Heath, S.C.2
Ott, J.3
-
20
-
-
0032728711
-
Power loss for multiallelic transmission/disequilibrium test when errors introduced: GAW11 simulated data
-
Gordon D, Matise TC, Heath SC, Ott J. 1999b. Power loss for multiallelic transmission/disequilibrium test when errors introduced: GAW11 simulated data. Genet Epidemiol 17:587-592.
-
(1999)
Genet Epidemiol
, vol.17
, pp. 587-592
-
-
Gordon, D.1
Matise, T.C.2
Heath, S.C.3
Ott, J.4
-
21
-
-
0033643184
-
An analytic solution to single nucleotide polymorphism error-detection rates in nuclear families: Implications for study design
-
Gordon D, Leal SM, Heath SC, Ott J. 2000. An analytic solution to single nucleotide polymorphism error-detection rates in nuclear families: implications for study design. Pac Symp Biocomput 663-674.
-
(2000)
Pac Symp Biocomput
, pp. 663-674
-
-
Gordon, D.1
Leal, S.M.2
Heath, S.C.3
Ott, J.4
-
22
-
-
0034917944
-
A transmission/disequilibrium test that allows for genotyping errors in the analysis of single-nucleotide polymorphism data
-
Gordon D, Heath SC, Liu X, Ott J. 2001. A transmission/disequilibrium test that allows for genotyping errors in the analysis of single-nucleotide polymorphism data. Am J Hum Genet 69:371-380.
-
(2001)
Am J Hum Genet
, vol.69
, pp. 371-380
-
-
Gordon, D.1
Heath, S.C.2
Liu, X.3
Ott, J.4
-
23
-
-
1842859051
-
Power and sample size calculations for case-control genetic association tests when errors are present: Application to single nucleotide polymorphisms
-
Gordon D, Finch SJ, Nothnagel M, Ott J. 2002. Power and sample size calculations for case-control genetic association tests when errors are present: application to single nucleotide polymorphisms. Hum Hered 54:22-33.
-
(2002)
Hum Hered
, vol.54
, pp. 22-33
-
-
Gordon, D.1
Finch, S.J.2
Nothnagel, M.3
Ott, J.4
-
24
-
-
0042629677
-
Errors and linkage disequilibrium interact multiplicatively when computing sample sizes for genetic case-control association studies
-
Gordon D, Levenstien MA, Finch SJ, Ott J. 2003. Errors and linkage disequilibrium interact multiplicatively when computing sample sizes for genetic case-control association studies. Pac Symp Biocomput 490-501.
-
(2003)
Pac Symp Biocomput
, pp. 490-501
-
-
Gordon, D.1
Levenstien, M.A.2
Finch, S.J.3
Ott, J.4
-
25
-
-
0037685262
-
Multiplexed genotyping with sequence-tagged molecular inversion probes
-
Hardenbol P, Baner J, Jain M, Nilsson M, Namsaraev EA, Karlin-Neumann GA, Fakhrai-Rad H, Ronaghi M, Willis TD, Landegren U, Davis RW. 2003. Multiplexed genotyping with sequence-tagged molecular inversion probes. Nat Biotechnol 21:673-678.
-
(2003)
Nat Biotechnol
, vol.21
, pp. 673-678
-
-
Hardenbol, P.1
Baner, J.2
Jain, M.3
Nilsson, M.4
Namsaraev, E.A.5
Karlin-Neumann, G.A.6
Fakhrai-Rad, H.7
Ronaghi, M.8
Willis, T.D.9
Landegren, U.10
Davis, R.W.11
-
27
-
-
0040650127
-
Tables of the cumulative non-central chi-square distribution
-
Harter HL, Owen DB, editors Providence, RI: American Mathematical Society
-
Haynam GE, Govindarajulu Z, Leone FC. 1970. Tables of the cumulative non-central chi-square distribution. In: Harter HL, Owen DB, editors. Selected tables in mathematical statistics, volume 1. Providence, RI: American Mathematical Society, p 1-78.
-
(1970)
Selected Tables in Mathematical Statistics
, vol.1
, pp. 1-78
-
-
Haynam, G.E.1
Govindarajulu, Z.2
Leone, F.C.3
-
28
-
-
2442650305
-
Detection of genotyping errors by Hardy-Weinberg equilibrium testing
-
Hosking L, Lumsden S, Lewis K, Yeo A, McCarthy L, Bansal A, Riley J, Purvis I, Xu CF. 2004. Detection of genotyping errors by Hardy-Weinberg equilibrium testing. Eur J Hum Genet 12:395-399.
-
(2004)
Eur J Hum Genet
, vol.12
, pp. 395-399
-
-
Hosking, L.1
Lumsden, S.2
Lewis, K.3
Yeo, A.4
McCarthy, L.5
Bansal, A.6
Riley, J.7
Purvis, I.8
Xu, C.F.9
-
29
-
-
0034858197
-
Universal SNP genotyping assay with fluorescence polarization detection
-
Hsu TM, Chen X, Duan S, Miller RD, Kwok PY. 2001. Universal SNP genotyping assay with fluorescence polarization detection. Biotechniques 31:560-568.
-
(2001)
Biotechniques
, vol.31
, pp. 560-568
-
-
Hsu, T.M.1
Chen, X.2
Duan, S.3
Miller, R.D.4
Kwok, P.Y.5
-
30
-
-
0026563916
-
Systematic detection of errors in genetic linkage data
-
Lincoln SE, Lander ES. 1992. Systematic detection of errors in genetic linkage data. Genomics 14:604-610.
-
(1992)
Genomics
, vol.14
, pp. 604-610
-
-
Lincoln, S.E.1
Lander, E.S.2
-
31
-
-
0346140885
-
Invader assay for SNP genotyping
-
Lyamichev V, Neri B. 2003. Invader assay for SNP genotyping. Methods Mol Biol 212:229-240.
-
(2003)
Methods Mol Biol
, vol.212
, pp. 229-240
-
-
Lyamichev, V.1
Neri, B.2
-
32
-
-
20844455582
-
Genotyping over 100,000 SNPs on a pair of oligonucleotide arrays
-
Matsuzaki H, Dong S, Loi H, Di X, Liu G, Hubbell E, Law J, Berntsen T, Chadha M, Hui H, Yang G, Webster T, Cawley S, Walsh P, Jones KW, Mei R. 2004. Genotyping over 100,000 SNPs on a pair of oligonucleotide arrays. Nat Methods 1:146-151.
-
(2004)
Nat Methods
, vol.1
, pp. 146-151
-
-
Matsuzaki, H.1
Dong, S.2
Loi, H.3
Di, X.4
Liu, G.5
Hubbell, E.6
Law, J.7
Berntsen, T.8
Chadha, M.9
Hui, H.10
Yang, G.11
Webster, T.12
Cawley, S.13
Walsh, P.14
Jones, K.W.15
Mei, R.16
-
33
-
-
0032231375
-
Detecting marker-disease associations by testing for Hardy-Weinberg disequilibrium at a marker locus
-
Nielsen DA, Ehm MG, Weir BS. 1999. Detecting marker-disease associations by testing for Hardy-Weinberg disequilibrium at a marker locus. Am J Hum Genet 63:1531-1540.
-
(1999)
Am J Hum Genet
, vol.63
, pp. 1531-1540
-
-
Nielsen, D.A.1
Ehm, M.G.2
Weir, B.S.3
-
34
-
-
0036275126
-
Bead Array technology: Enabling an accurate, cost-effective approach to high-throughput genotyping
-
Oliphant A, Barker DL, Stuelpnagel JR, Chee MS. 2002. Bead Array technology: enabling an accurate, cost-effective approach to high-throughput genotyping. Biotechniques [Suppl] 56-8:60-61.
-
(2002)
Biotechniques [Suppl]
, vol.56
, Issue.8
, pp. 60-61
-
-
Oliphant, A.1
Barker, D.L.2
Stuelpnagel, J.R.3
Chee, M.S.4
-
36
-
-
0029846120
-
Identifying marker typing incompatibilities in linkage analysis
-
Stringham HM, Boehnke M. 1996. Identifying marker typing incompatibilities in linkage analysis. Am J Hum Genet 59:946-950.
-
(1996)
Am J Hum Genet
, vol.59
, pp. 946-950
-
-
Stringham, H.M.1
Boehnke, M.2
-
37
-
-
0028851862
-
Departure from Hardy-Weinberg equilibrium should be systematically tested studies of association between genetic markers and disease
-
Tiret L, Cambien F. 1995. Departure from Hardy-Weinberg equilibrium should be systematically tested studies of association between genetic markers and disease. Circulation 92:3364-3365.
-
(1995)
Circulation
, vol.92
, pp. 3364-3365
-
-
Tiret, L.1
Cambien, F.2
-
39
-
-
10044236430
-
Allelic association patterns for a dense SNP map
-
Weir BS, Hill WG, Cardon LR. 2004. Allelic association patterns for a dense SNP map. Genet Epidemiol 27:442-450.
-
(2004)
Genet Epidemiol
, vol.27
, pp. 442-450
-
-
Weir, B.S.1
Hill, W.G.2
Cardon, L.R.3
-
40
-
-
0036942338
-
Positive results in association studies are associated with departure from Hardy-Weinberg equilibrium: Hint for genotyping error?
-
Xu J, Turner A, Little J, Bleecker ER, Meyers DA. 2002. Positive results in association studies are associated with departure from Hardy-Weinberg equilibrium: hint for genotyping error? Hum Genet 6:573-574.
-
(2002)
Hum Genet
, vol.6
, pp. 573-574
-
-
Xu, J.1
Turner, A.2
Little, J.3
Bleecker, E.R.4
Meyers, D.A.5
|