Simultaneous genotyping of DRB1/3/4/5 loci by oligonucleotide microarray

Journal of Molecular Diagnostics

Volumn 7, Issue 5, 2005, Pages 592-599

  Ye, Bang Ce ^a   Chu, Xiaohe ^b   Fan, Ye ^c   Li, Songyang ^a   Yin, Bincheng ^a   Zuo, Peng ^a  

^a EAST CHINA UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^b Shenghua BioK Bio Co Ltd   (China)

^c Jiangnan Biotechnology Inc   (China)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DNA BASE; HLA DR ANTIGEN; HLA DR3 ANTIGEN; HLA DR4 ANTIGEN; HLA DR5 ANTIGEN; OLIGONUCLEOTIDE;

ALLELE; ARTICLE; CELL LINE; COST; DNA HYBRIDIZATION; DNA MICROARRAY; DNA PROBE; EXON; GENE AMPLIFICATION; GENE LOCUS; GENETIC SCREENING; GENOTYPE; HAPLOTYPE; HLA MATCHING; HUMAN; HUMAN CELL; NORMAL HUMAN; POLYMERASE CHAIN REACTION;

EID: 27744490281     PISSN: 15251578     EISSN: None     Source Type: Journal    
DOI: 10.1016/s1525-1578(10)60592-2     Document Type: Article

References (18)

1. Pullen AM, Kappler JW, Marrack P: Tolerance to self antigens shapes the T-cell repertoire. Immunol Rev 1989, 107:125-139
2. Moya-Quiles MR, Torio A, Muro M, Montes-Ares O, Marin L, Minguela A, Sanchez-Bueno F, Garcia-Alonso AM, Parrilla P, Alvarez-Lopez MR: Impact of HLA-C on acute rejection in liver transplantation. Transplant Proc 2003, 35:1892-1893
3. Clift RA, Storb R: Histoincompatible bone marrow transplants in humans. Annu Rev Immunol 1987, 5:43-64
4. Nepom GT, Erlich HA: MHC Class-II molecules and autoimmunity. Annu Rev Immunol 1991, 9:493-525
5. Wu H, Khanna D, Park G, Gersuk V, Nepom GT, Wong WK, Paulus HE, Tsao BP: Interaction between RANKL and HLA-DRB1 genotypes may contribute to younger age at onset of seropositive rheumatoid arthritis in an inception cohort. Arthritis Rheum 2004, 50:3093-3103
6. Klitz W: Viruses, cancer and the MHC. Nature 1992, 356:17-18
7. Rios A, Rodriguez JM, Moya MR, Galindo PJ, Canteras M, Alvarez MR, Parrilla P: Frequency of HLA-C alleles in differentiated thyroid carcinoma in southeastern Spain. Cancer 2004, 100:264-269
8. Ota M, Seki T, Fukusima H, Tsuji K, Inoko H: HLA DRB1 genotyping by modified PCR-RFLP method combined with group-specific primers. Tissue Antigens 1992, 39:187-202
9. Tiercy JM, Morel C, Freidel AC, Zwahlen F, Gebuhrer L, Betuel H, Jeannet M, Mach B: Selection of unrelated donors for bone marrow transplantation is improved by HLA class II genotyping with oligonucleotide hybridization. Proc Natl Acad Sci USA 1991, 88:7121-7125
10. Buyse I, Decorte R, Baens M, Cuppens H, Semana G, Emonds MP, Marynen P, Cassiman JJ: Rapid DNA typing of class II HLA antigens using the PCR and reverse dot blot hybridization. Tissue Antigens 1993, 41:1-14
11. Knipper AJ, Hinney A, Schuch B, Enczmann J, Uhrberg M, Wernet P: Selection of unrelated bone marrow donors by PCR-SSP typing and subsequent nonradioactive sequence-based typing for HLA DRB1/3/4/5, DQB1, and DPB1 alleles. Tissue Antigens 1994, 44:275-284
12. Sylvain K, Aurelie H, Marc M, Christophe R: Rapid screening for HLA-B27 by a TaqMan-PCR assay using sequence-specific primers and a minor groove binder probe, a novel type of TaqMan trade mark probe. J Immunol Methods 2004, 287:179-186
13. Zhen G, Mark SG, Lee H, John AH, Effie WP: Oligonucleotide array for high-throughput SNPs detection in the MHC Class I genes: hLA-B as a model system. Genome Res 2001, 12:447-257
14. Consolandi C, Frosini A, Pera C, Ferrara GB, Bordoni R, Castiglioni B, Rizzi E, Mezzelani A, Bernardi LR, De Bellis G, Battaglia C: Polymorphism analysis within the HLA-A locus by universal oligonucleotide array. Hum Mutat 2004, 24:428-434
15. Jaakkola E, Herzberg I, Crane AM, Pointon JJ, Laiho K, Kauppi M, Kaarela K, Wordsworth BP, Tuomilehto J, Brown MA: A novel human leucocyte antigen-DRB1 genotyping method based on multiplex primer extension reactions. Tissue Antigens 2004, 64:88-95
16. Kotsch K, Wehling J, Blasczyk R: Sequencing of HLA class II genes based on the conserved diversity of the non-coding regions: sequencing based typing of HLA-DRB genes. Tissue Antigens 1999, 53:486-497
17. Sayer D, Whidborne R, Brestovac B, Trimboli F, Witt C, Christiansen F: HLA-DRB1 DNA sequencing based typing: an approach suitable for high throughput typing including unrelated bone marrow registry donors. Tissue Antigens 2001, 57:46-54
18. Stephen JS, Robert LG, Henry AE: Rapid typing of DNA sequence polymorphism at the HLA-DRB1 locus using the PCR and nonradioactive oligonucleotide probes. Human Immunol 1991, 30:190-201